>VHN284 (VHN284Q) /CSM/VH/VHN2-D/VHN284Q.Seq.d/
ACACTACAATCTTCTTATNTNAAAACATAATACACCCCTTCGAAATNTATCGTAAAAAAT
CATTAGTCCTCTTTTCCCCAAAAAGATATTTTTTTTTTTTTNAXXXXXXXXXX

TTIFLXXNIIHPFEXYRKKSLVLFSPKRYFFFF---

Frame A:
tlqssyxkt*ytpskxivknh*ssfpqkdifffx---


Frame B:
hynllxxkhntplrnxs*kiisplfpkkiffff---


Frame C:
TTIFLXXNIIHPFEXYRKKSLVLFSPKRYFFFF---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHN284 (VHN284Q) /CSM/VH/VHN2-D/VHN284Q.Seq.d/                        157   4e-38
VFL781 (VFL781Q) /CSM/VF/VFL7-D/VFL781Q.Seq.d/                         30   6.0
SSJ802 (SSJ802Q) /CSM/SS/SSJ8-A/SSJ802Q.Seq.d/                         30   6.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ426012) Dictyostelium discoideum cDNA clone:ddv57g22, 5' ...   157   9e-35  1
(BY645766) Mus musculus visual cortex cDNA, RIKEN full-lengt...    36   8.2    2
(CJ744075) Ipomoea nil cDNA clone:jmsf28o10, 5' end.               30   8.9    2

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 132,139,633

 psg: 0.87  gvh: 0.25  alm: 0.58  top: 0.63  tms: 0.00  mit: 0.36  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for VHN284 is nuc

>VHN284F.Seq
ACACTACAATCTTCTTATNTNAAAACATAATACACCCCTTCGAAATNTATCGTAAAAAAT
CATTAGTCCTCTTTTCCCCAAAAAGATATTTTTTTTTTTTTNANNNNNNNNNN