>AFO572 (AFO572Q) /CSM/AF/AFO5-C/AFO572Q.Seq.d/
XXXXXXXXXXGTCCANATTTCCATANATGTGTTNAAAAACGTGGNGGNATNTTAAGNTGN
GAATTTNANCCNCCAANACAACCAAGATCCCTTGATTGGGCTGAAAATGAAAATGATGAT
CGNGACTATNATGATCGNGACTATNATGATGATGAANATGATGGTGATTATNANGGCCGN
GACGGNGACTATGATGGNGATTATGATGGNGATTATNATGATGNCAATTA

---PXFHXCVXKRGGXLXXEFXPPXQPRSLDWAENENDDRDYXDRDYXDDEXDGDYXGRD
GDYDGDYDGDYXDXN

Frame A:
---sxfpxmcxktwxxxkxxixxxxttkip*lg*k*k**sxlx*sxlx***x*w*lxxpx
rxl*wxl*wxlx*xql


Frame B:
---PXFHXCVXKRGGXLXXEFXPPXQPRSLDWAENENDDRDYXDRDYXDDEXDGDYXGRD
GDYDGDYDGDYXDXN


Frame C:
---xisixvxknvxxx*xxnxxxqxnqdpliglkmkmmixtxmixtxmmmxmmvixxaxt
xtmmximmxixmmxi

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFO572 (AFO572Q) /CSM/AF/AFO5-C/AFO572Q.Seq.d/                        287   4e-77
CFH605 (CFH605Q) /CSM/CF/CFH6-A/CFH605Q.Seq.d/                        281   2e-75
SLJ720 (SLJ720Q) /CSM/SL/SLJ7-A/SLJ720Q.Seq.d/                        280   9e-75
SLI767 (SLI767Q) /CSM/SL/SLI7-C/SLI767Q.Seq.d/                        280   9e-75
SLI753 (SLI753Q) /CSM/SL/SLI7-C/SLI753Q.Seq.d/                        280   9e-75
SLI573 (SLI573Q) /CSM/SL/SLI5-D/SLI573Q.Seq.d/                        280   9e-75
SLI384 (SLI384Q) /CSM/SL/SLI3-D/SLI384Q.Seq.d/                        280   9e-75
SLH820 (SLH820Q) /CSM/SL/SLH8-A/SLH820Q.Seq.d/                        280   9e-75
SLH722 (SLH722Q) /CSM/SL/SLH7-A/SLH722Q.Seq.d/                        280   9e-75
SLH522 (SLH522Q) /CSM/SL/SLH5-A/SLH522Q.Seq.d/                        280   9e-75

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC115685|AC115685.1 Dictyostelium discoideum chromosome 2 map 4718821-4752388 strain AX4, complete sequence.   280  7e-72  1
X51892|X51892.1 Dictyostelium discoideum SP60 gene for spore coat protein.   280  7e-72  1
M26239|M26239.1 D.discoideum spore coat protein SP60 gene, complete cds.   280  7e-72  1
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.   280  7e-72  1
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, WORKING DRAFT SEQUENCE, 5 unordered pieces.    46  0.18  1
AC095461|AC095461.6 Rattus norvegicus clone CH230-7H4, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.    46  0.18  1
AC104019|AC104019.1 Homo sapiens chromosome 11 clone RP11-356C9 map 11, LOW-PASS SEQUENCE SAMPLING.    40  0.24  2
AE014851|AE014851.1 Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete sequence.    46  0.24  2
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.    46  0.29  2
BX004991|BX004991.5 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-222F23.    40  2.6  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor...    59   4e-08
CP001016_3180(CP001016|pid:none) Beijerinckia indica subsp. indi...    40   0.031
(Q8MP30) RecName: Full=Uncharacterized histidine-rich protein DD...    39   0.070
AE017355_525(AE017355|pid:none) Bacillus thuringiensis serovar k...    39   0.070
(P04929) Histidine-rich glycoprotein precursor.  &KGZQHL(A22692)...    39   0.070
CP001283_615(CP001283|pid:none) Bacillus cereus AH820, complete ...    39   0.070
CP000485_531(CP000485|pid:none) Bacillus thuringiensis str. Al H...    38   0.12
AE016879_586(AE016879|pid:none) Bacillus anthracis str. Ames, co...    38   0.12
AC011708_11(AC011708|pid:none) Arabidopsis thaliana chromosome I...    37   0.16
FM992689_896(FM992689|pid:none) Candida dubliniensis CD36 chromo...    37   0.16

 psg: 0.76  gvh: 0.51  alm: 0.63  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 20.0 %: mitochondrial
	 20.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for AFO572 is cyt

>AFO572Z.Seq
----------GTCCANATTTCCATANATGTGTTNAAAAACGTGGNGGNATNTTAAGNTGN
GAATTTNANCCNCCAANACAACCAAGATCCCTTGATTGGGCTGAAAATGAAAATGATGAT
CGNGACTATNATGATCGNGACTATNATGATGATGAANATGATGGTGATTATNANGGCCGN
GACGGNGACTATGATGGNGATTATGATGGNGATTATNATGATGNCAATTA