>AFO461 (AFO461Q) /CSM/AF/AFO4-C/AFO461Q.Seq.d/
XXXXXXXXXXTGATACACATGGGTCAATTCTATGATCTTTTGAATATATTTAAGATTAAT
GGATCACCATCAGAGGAGAAACCATACCTTTTCAATGGCGACTTTGTGGATAGGGGTAGT
TTTAGTTTTGAAATTATCATCACTCTATTGGCTTATAAATTATTGTACCCAAATCATATG
CATTTGACAAGGGGTAACCATGAGACAACCGATATGAATCGTTTCTATGGTTTCCAAGGC
GAAGTGGTTGCAAAATACAGTGAGATGGTATTCGATCTATTCTCAGAGTTGTTCAATTGG
TTCCCATTGGCATTCGTGTTGGATGAATCGTTTATGGTGGTACATGGTGGTTTGTTTGGT
AAGGATGGTGTCACACTTGACGATATTAGAAAGATTAAACGTAATGCACCAGATCCAAAA
GATAATGAATTGGTTCAATGCTTACTTTGGTCTGATCCTCAATCAAATCCTGGTATTGCT
CCTTCTTCAAGAGGTGTAGGTGTTTACTTTGGACCTGATGTCACCAGACGTTTCCTCAAG
GAAAATAATCTATCAACTATCATTAGATCTCATGAAGTTAAAGAAAAAGGTTATCAAATC
GATGATGATGGTTCTCTCATCACTGTTTTCTCTGCTCCAAATTATTGTGATCAATCTGGT
AATCTTGGCTCATTTATAAATATAACTGAAGATAAAATTAAAATTACAACTTTGAAGCTG
TGAACATCCGAATATACCACCAAGCATTAGCCAAAAAAA

---IHMGQFYDLLNIFKINGSPSEEKPYLFNGDFVDRGSFSFEIIITLLAYKLLYPNHMH
LTRGNHETTDMNRFYGFQGEVVAKYSEMVFDLFSELFNWFPLAFVLDESFMVVHGGLFGK
DGVTLDDIRKIKRNAPDPKDNELVQCLLWSDPQSNPGIAPSSRGVGVYFGPDVTRRFLKE
NNLSTIIRSHEVKEKGYQIDDDGSLITVFSAPNYCDQSGNLGSFINITEDKIKITTLKL*
tseyttkh*pkk

Frame A:
---dthgsil*sfeyi*d*witirgetipfqwrlcg*g*f*f*nyhhsigl*iivpksya
fdkg*p*dnryesflwfprrsgckiq*dgirsilrvvqlvpigirvg*ivyggtwwfvw*
gwcht*ry*kd*t*ctrskr**igsmltlv*ssikswycsffkrcrcllwt*chqtfpqg
k*sinyh*is*s*rkrlsnr**wfshhcflcskll*siw*swliykyn*r*n*nynfeav
niriyhqalakk


Frame B:
---IHMGQFYDLLNIFKINGSPSEEKPYLFNGDFVDRGSFSFEIIITLLAYKLLYPNHMH
LTRGNHETTDMNRFYGFQGEVVAKYSEMVFDLFSELFNWFPLAFVLDESFMVVHGGLFGK
DGVTLDDIRKIKRNAPDPKDNELVQCLLWSDPQSNPGIAPSSRGVGVYFGPDVTRRFLKE
NNLSTIIRSHEVKEKGYQIDDDGSLITVFSAPNYCDQSGNLGSFINITEDKIKITTLKL*
tseyttkh*pkk


Frame C:
---ytwvnsmif*iylrlmdhhqrrnhtfsmatlwigvvlvlklsslywlinyctqiici
*qgvtmrqpi*ivsmvskakwlqntvrwysiysqscsigshwhscwmnrlwwymvvclvr
mvshltilerlnvmhqiqkimnwfnayfglilnqilvllllqev*vftldlmspdvssrk
iiyqlsldlmklkkkviksmmmvlsslfsllqiivinlvilahl*i*lkiklklql*sce
hpnippsisqk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFO461 (AFO461Q) /CSM/AF/AFO4-C/AFO461Q.Seq.d/                       1471   0.0
AFL662 (AFL662Q) /CSM/AF/AFL6-C/AFL662Q.Seq.d/                       1465   0.0
VFI734 (VFI734Q) /CSM/VF/VFI7-B/VFI734Q.Seq.d/                       1437   0.0
VFF491 (VFF491Q) /CSM/VF/VFF4-D/VFF491Q.Seq.d/                       1431   0.0
SFG624 (SFG624Q) /CSM/SF/SFG6-A/SFG624Q.Seq.d/                       1431   0.0
SFD165 (SFD165Q) /CSM/SF/SFD1-C/SFD165Q.Seq.d/                       1413   0.0
CFG219 (CFG219Q) /CSM/CF/CFG2-A/CFG219Q.Seq.d/                       1380   0.0
VFE321 (VFE321Q) /CSM/VF/VFE3-A/VFE321Q.Seq.d/                       1370   0.0
SSE754 (SSE754Q) /CSM/SS/SSE7-C/SSE754Q.Seq.d/                       1348   0.0
VFK254 (VFK254Q) /CSM/VF/VFK2-C/VFK254Q.Seq.d/                       1330   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

CD478519|CD478519.1 eca01-74ms3-e04 Eca01 Eschscholzia californica cDNA clone eca01-74ms3-e04 5', mRNA sequence.    70  4e-08  1
AJ561748|AJ561748.1 Cryptosporidium parvum GSS, PAC clone pica_0004_g07, T7 end  sequence.    34  9e-08  4
CA933944|CA933944.1 MTU3TS.P14.F11 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA sequence.    54  4e-05  2
CB821514|CB821514.1 EST 2365 Half-Ripe Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone be002m12 3', mRNA sequence.    60  4e-05  1
BU041737|BU041737.1 PP_LEa0010F03f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0010F03f, mRNA sequence.    60  4e-05  1
BF272976|BF272976.1 GA__Eb0016H03f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0016H03f, mRNA sequence.    48  5e-05  2
BQ916199|BQ916199.1 QHB17B15.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB17B15, mRNA sequence.    58  2e-04  1
BU895987|BU895987.1 X033H08 Populus wood cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence.    54  0.003  1
BU822525|BU822525.1 UB38BPH04 Populus tremula cambium cDNA library Populus tremula cDNA 5 prime, mRNA sequence.    54  0.003  1
AV202542|AV202542.1 Caenorhabditis elegans cDNA clone:yk551g8 : 5' end, single read.    44  0.007  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR859667_1(CR859667|pid:none) Pongo abelii mRNA; cDNA DKFZp459E1...   293   5e-78
(P53041) RecName: Full=Serine/threonine-protein phosphatase 5;  ...   292   6e-78
AK297095_1(AK297095|pid:none) Homo sapiens cDNA FLJ55717 complet...   292   6e-78
AK223222_1(AK223222|pid:none) Homo sapiens mRNA for protein phos...   292   6e-78
BC000750_1(BC000750|pid:none) Homo sapiens protein phosphatase 5...   292   6e-78
AK293402_1(AK293402|pid:none) Homo sapiens cDNA FLJ55048 complet...   292   6e-78
CR848198_1(CR848198|pid:none) Xenopus tropicalis finished cDNA, ...   292   8e-78
BC080162_1(BC080162|pid:none) Xenopus tropicalis ppp5c protein, ...   292   8e-78
BC078786_1(BC078786|pid:none) Rattus norvegicus protein phosphat...   290   2e-77
(Q60676) RecName: Full=Serine/threonine-protein phosphatase 5;  ...   290   2e-77

 psg: 0.75  gvh: 0.42  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for AFO461 is cyt

>AFO461Z.Seq
----------TGATACACATGGGTCAATTCTATGATCTTTTGAATATATTTAAGATTAAT
GGATCACCATCAGAGGAGAAACCATACCTTTTCAATGGCGACTTTGTGGATAGGGGTAGT
TTTAGTTTTGAAATTATCATCACTCTATTGGCTTATAAATTATTGTACCCAAATCATATG
CATTTGACAAGGGGTAACCATGAGACAACCGATATGAATCGTTTCTATGGTTTCCAAGGC
GAAGTGGTTGCAAAATACAGTGAGATGGTATTCGATCTATTCTCAGAGTTGTTCAATTGG
TTCCCATTGGCATTCGTGTTGGATGAATCGTTTATGGTGGTACATGGTGGTTTGTTTGGT
AAGGATGGTGTCACACTTGACGATATTAGAAAGATTAAACGTAATGCACCAGATCCAAAA
GATAATGAATTGGTTCAATGCTTACTTTGGTCTGATCCTCAATCAAATCCTGGTATTGCT
CCTTCTTCAAGAGGTGTAGGTGTTTACTTTGGACCTGATGTCACCAGACGTTTCCTCAAG
GAAAATAATCTATCAACTATCATTAGATCTCATGAAGTTAAAGAAAAAGGTTATCAAATC
GATGATGATGGTTCTCTCATCACTGTTTTCTCTGCTCCAAATTATTGTGATCAATCTGGT
AATCTTGGCTCATTTATAAATATAACTGAAGATAAAATTAAAATTACAACTTTGAAGCTG
TGAACATCCGAATATACCACCAAGCATTAGCCAAAAAAA