>VHJ146 (VHJ146Q) /CSM/VH/VHJ1-B/VHJ146Q.Seq.d/
XXXXXXXXXXAAGTTGAATTTGCTAAATTAGCTGCTAGAGGTTTAACAGTTGTAATTGCA
AGTGGTGATAGTGGTGCTTATGATTTAGGTGGTCCACCAATGGGTGCTAATGGTTGTGAA
AATGCAAGAGGTGATTGGCCATCAAATTCAGAATATGTTAGTGCAGTTGGTTCAATTTAT
TTTACACCATATTCAGCACCAATTTGTTATGATTCAGTTTCAAGTGGTGGTGTAAATTGT
CAATCACTTCCAATTGGTGAAGTTGGTGTTTCAATTGATTATGGTACAATGTGGACATCA
GGTGGTGGTTTCTCAAATTTCACAGAGACTGCTTACTATCAAAAAGATTTCGTAAATGAA
TATTTAAATAAATTAAAAGAATTGGATGTTTCACCACCATCAAATCTTTTCAATTCAAAT
GGTAGAGCATATCCAGATTTTTCAACAGTTGGTAAGAATTTATATGTTATCAATGGTGGT
GAATGGTTATCAGTTGATGGTACATCTGCTTCTGCACCAATCTTNTGATGGTATGATTAC
AATTCTCAATGATATTAGATTAAATAAAGGTTTACCACAATTAGGTTTCCTTAATCCATT
ATTCTATCAAATCGCAAGACCAAATCCAGAAGCTT

---VEFAKLAARGLTVVIASGDSGAYDLGGPPMGANGCENARGDWPSNSEYVSAVGSIYF
TPYSAPICYDSVSSGGVNCQSLPIGEVGVSIDYGTMWTSGGGFSNFTETAYYQKDFVNEY
LNKLKELDVSPPSNLFNSNGRAYPDFSTVGKNLYVINGGEWLSVDGTSASAPIX*wydyn
sq*y*ik*rfttirfp*siilsnrktksrs

Frame A:
---s*ic*isc*rfnscnckw**wcl*frwstngc*wl*kckr*laikfric*cswfnlf
ytifstnll*fsfkwwcklsitsnw*swcfn*lwynvdirwwflkfhrdcllskrfrk*i
fk*ikrigcfttiksfqfkw*sisrffnsw*eficyqww*mvis*wyicfctnlxmv*lq
fsmild*ikvyhn*vslihysiksqdqiqkl


Frame B:
---VEFAKLAARGLTVVIASGDSGAYDLGGPPMGANGCENARGDWPSNSEYVSAVGSIYF
TPYSAPICYDSVSSGGVNCQSLPIGEVGVSIDYGTMWTSGGGFSNFTETAYYQKDFVNEY
LNKLKELDVSPPSNLFNSNGRAYPDFSTVGKNLYVINGGEWLSVDGTSASAPIX*wydyn
sq*y*ik*rfttirfp*siilsnrktksrs


Frame C:
---lnlln*llev*ql*lqvvivvlmi*vvhqwvlmvvkmqevighqiqnmlvqlvqfil
hhiqhqfvmiqfqvvv*ivnhfqlvklvfqlimvqcghqvvvsqisqrlltikkis*mni
*in*knwmfhhhqifsiqmvehiqifqqlvriymlsmvvngyqlmvhlllhqsxdgmiti
lndirlnkglpqlgflnplfyqiarpnpea

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHJ146 (VHJ146Q) /CSM/VH/VHJ1-B/VHJ146Q.Seq.d/                       1233   0.0
VHP219 (VHP219Q) /CSM/VH/VHP2-A/VHP219Q.Seq.d/                       1207   0.0
VHA307 (VHA307Q) /CSM/VH/VHA3-A/VHA307Q.Seq.d/                       1158   0.0
VHO823 (VHO823Q) /CSM/VH/VHO8-A/VHO823Q.Seq.d/                       1156   0.0
VHM882 (VHM882Q) /CSM/VH/VHM8-D/VHM882Q.Seq.d/                       1156   0.0
VFI509 (VFI509Q) /CSM/VF/VFI5-A/VFI509Q.Seq.d/                       1148   0.0
VHC267 (VHC267Q) /CSM/VH/VHC2-C/VHC267Q.Seq.d/                       1146   0.0
VSD253 (VSD253Q) /CSM/VS/VSD2-C/VSD253Q.Seq.d/                       1144   0.0
VHN455 (VHN455Q) /CSM/VH/VHN4-C/VHN455Q.Seq.d/                       1142   0.0
VHO735 (VHO735Q) /CSM/VH/VHO7-B/VHO735Q.Seq.d/                       1140   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY055590|AY055590.1 Dictyostelium discoideum dipeptidyl aminopeptidase mRNA, complete cds.  1011   0.0    2
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence.   795   0.0    11
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    36   1e-04  10
BX324006|BX324006.7 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    38   0.002  10
AF538053|AF538053.1 Monosiga brevicollis mitochondrion, complete genome.    38   0.012  6
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, complete sequence, section 1/5.    36   0.029  10
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    32   0.049  13
AP003129|AP003129.2 Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome, section 1/10.    34   0.054  7
AP003358|AP003358.2 Staphylococcus aureus subsp. aureus Mu50 genomic DNA, complete sequence, section 1/9.    34   0.061  8
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.           32   0.071  16

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116960_13(AC116960|pid:none) Dictyostelium discoideum chromoso...   353   e-111
AF142415_1(AF142415|pid:none) Amoeba proteus pepstatin-insensiti...   140   3e-38
BC068900_1(BC068900|pid:none) Xenopus laevis hypothetical protei...    84   2e-20
AM411678_1(AM411678|pid:none) Plasmodiophora brassicae ORF1 for ...    87   5e-20
DQ100344_1(DQ100344|pid:none) Canis familiaris breed Tibetan Ter...    80   8e-19
(Q9XSB8) RecName: Full=Tripeptidyl-peptidase 1;          Short=T...    79   1e-18
BC135587_1(BC135587|pid:none) Xenopus tropicalis hypothetical pr...    78   2e-18
(Q9EQV6) RecName: Full=Tripeptidyl-peptidase 1;          Short=T...    81   2e-18
AB083308_1(AB083308|pid:none) Macaca fascicularis cln2 mRNA for ...    81   2e-18
BC163102_1(BC163102|pid:none) Danio rerio tripeptidyl peptidase ...    77   4e-18

 psg: 0.92  gvh: 0.46  alm: 0.41  top: 0.47  tms: 0.00  mit: 0.22  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: cytoplasmic
	 28.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for VHJ146 is cyt

>VHJ146Z.Seq
NNNNNNNNNNAAGTTGAATTTGCTAAATTAGCTGCTAGAGGTTTAACAGTTGTAATTGCA
AGTGGTGATAGTGGTGCTTATGATTTAGGTGGTCCACCAATGGGTGCTAATGGTTGTGAA
AATGCAAGAGGTGATTGGCCATCAAATTCAGAATATGTTAGTGCAGTTGGTTCAATTTAT
TTTACACCATATTCAGCACCAATTTGTTATGATTCAGTTTCAAGTGGTGGTGTAAATTGT
CAATCACTTCCAATTGGTGAAGTTGGTGTTTCAATTGATTATGGTACAATGTGGACATCA
GGTGGTGGTTTCTCAAATTTCACAGAGACTGCTTACTATCAAAAAGATTTCGTAAATGAA
TATTTAAATAAATTAAAAGAATTGGATGTTTCACCACCATCAAATCTTTTCAATTCAAAT
GGTAGAGCATATCCAGATTTTTCAACAGTTGGTAAGAATTTATATGTTATCAATGGTGGT
GAATGGTTATCAGTTGATGGTACATCTGCTTCTGCACCAATCTTNTGATGGTATGATTAC
AATTCTCAATGATATTAGATTAAATAAAGGTTTACCACAATTAGGTTTCCTTAATCCATT
ATTCTATCAAATCGCAAGACCAAATCCAGAAGCTT