>VHI756 (VHI756Q) /CSM/VH/VHI7-C/VHI756Q.Seq.d/
XXXXXXXXXXCTGGTAATTGTGATTTATCCGACACCGTTTGCCAAGATGGTAATGAATGT
ACTACCAATGTTTGTGAATCAAGTGATAGTGTCCTTGGTGTATGTACAAACTCAACAGTT
GAATGCGGTGCTACCAACACTGATAAATGTATCCAATTCTCTTGTAATGAAGCCACCGGT
TGCCAACAATCAGCTGTCGTTTGTCCAGATGTTGGTAGTTGTTTAGTTGGTTATTGTGAT
AGTAAACAAGGTTGTCTCACCAAACCAAGATCTTGCGATACTGGTGTTTTCTGTTTAACT
GGTGAATGTATTGAAAATGCTGGTGGTTGTATCGTCTATGAAAAACGTTGTGATGCTGAT
AATGGAAGATGTCAACAAGGTGTATGTGTAAATAATACCGCCACTGAAGAAGGTTATTGT
AAATCTGAAGACTATGATCCATTACCATTCATTTGTAAAACTGGTGCTGTCGTTTCAACT
GCTGTCATTGCTGGTGTCACTGTCGCTGGTGCTGTTGCACTTGGTGTTTTCATTTATGGT
GGTAAAAGAGGTTATGACTATTGGAAAGAATCAAGAAATGTTCAATTCAGTGGTTCAAAT
TNTAATCCACTTTATGAACAAAATCCAAATGGTTCTGGTGTAAATCCATTATATAANATA
ATTCTGCATTATAAAATAAAATTAGTCTATATAAAT

---GNCDLSDTVCQDGNECTTNVCESSDSVLGVCTNSTVECGATNTDKCIQFSCNEATGC
QQSAVVCPDVGSCLVGYCDSKQGCLTKPRSCDTGVFCLTGECIENAGGCIVYEKRCDADN
GRCQQGVCVNNTATEEGYCKSEDYDPLPFICKTGAVVSTAVIAGVTVAGAVALGVFIYGG
KRGYDYWKESRNVQFSGSNXNPLYEQNPNGSGVNPLYXIILHYKIKLVYIN

Frame A:
---w*l*firhrlprw**myyqcl*ik**cpwcmyklns*mrcyqh**mypill**shrl
ptiscrlsrcw*lfswll***trlshqtkilrywcflfnw*my*kcwwlyrl*ktl*c**
wkmstrcmck*yrh*rrll*i*rl*sitihl*nwccrfncchcwchcrwccctwcfhlww
*krl*llerikkcsiqwfkx*stl*tkskwfwcksii*xnsal*nkislyk


Frame B:
---GNCDLSDTVCQDGNECTTNVCESSDSVLGVCTNSTVECGATNTDKCIQFSCNEATGC
QQSAVVCPDVGSCLVGYCDSKQGCLTKPRSCDTGVFCLTGECIENAGGCIVYEKRCDADN
GRCQQGVCVNNTATEEGYCKSEDYDPLPFICKTGAVVSTAVIAGVTVAGAVALGVFIYGG
KRGYDYWKESRNVQFSGSNXNPLYEQNPNGSGVNPLYXIILHYKIKLVYIN


Frame C:
---viviyptpfakmvmnvlpmfvnqvivslvyvqtqqlnavlptlinvsnslvmkppva
nnqlsfvqmlvvv*lvivivnkvvspnqdlailvfsv*lvnvlkmlvvvssmknvvmlim
edvnkvyv*iipplkkvivnlktmihyhsfvklvlsfqllsllvslslvllhlvfsfmvv
kevmtigknqemfnsvvqixihfmnkiqmvlv*ihyix*fciik*n*si*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHI756 (VHI756Q) /CSM/VH/VHI7-C/VHI756Q.Seq.d/                       1348   0.0
VHA637 (VHA637Q) /CSM/VH/VHA6-B/VHA637Q.Seq.d/                       1334   0.0
VHD791 (VHD791Q) /CSM/VH/VHD7-D/VHD791Q.Seq.d/                       1328   0.0
VHQ221 (VHQ221Q) /CSM/VH/VHQ2-A/VHQ221Q.Seq.d/                       1320   0.0
VHP731 (VHP731Q) /CSM/VH/VHP7-B/VHP731Q.Seq.d/                       1320   0.0
VHI823 (VHI823Q) /CSM/VH/VHI8-A/VHI823Q.Seq.d/                       1320   0.0
VHI743 (VHI743Q) /CSM/VH/VHI7-B/VHI743Q.Seq.d/                       1320   0.0
VHB544 (VHB544Q) /CSM/VH/VHB5-B/VHB544Q.Seq.d/                       1320   0.0
VHA408 (VHA408Q) /CSM/VH/VHA4-A/VHA408Q.Seq.d/                       1320   0.0
VFM306 (VFM306Q) /CSM/VF/VFM3-A/VFM306Q.Seq.d/                       1320   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, complete cds.  1275   0.0    2
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.   113   8e-26  12
AC128919|AC128919.4 Rattus norvegicus clone CH230-341E19, WORKING DRAFT SEQUENCE, 4 unordered pieces.    34   0.32   7
AC011664|AC011664.10 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence.    36   0.63   6
AC010045|AC010045.5 Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence.    46   0.65   1
AE003522|AE003522.3 Drosophila melanogaster chromosome 3L, section 63 of 83 of the complete sequence.    46   0.65   1
BX324148|BX324148.5 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    40   1.1    5
AC101638|AC101638.1 Mus musculus clone RP23-199P13, LOW-PASS SEQUENCE SAMPLING.    34   1.2    4
AC140864|AC140864.1 Homo sapiens chromosome 16 clone RP11-1072P17, WORKING DRAFT SEQUENCE, 10 unordered pieces.    38   1.6    5
AC103650|AC103650.2 Mus musculus clone RP23-136C22, WORKING DRAFT SEQUENCE, 10 unordered pieces.    38   1.7    6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   412   e-114
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                207   3e-52
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   203   4e-51
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                176   8e-43
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   165   1e-39
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                132   1e-29
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                131   2e-29
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...    80   8e-14
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    78   3e-13
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    77   7e-13

 psg: 0.75  gvh: 0.49  alm: 0.22  top: 0.73  tms: 0.07  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for VHI756 is nuc

>VHI756Z.Seq
NNNNNNNNNNCTGGTAATTGTGATTTATCCGACACCGTTTGCCAAGATGGTAATGAATGT
ACTACCAATGTTTGTGAATCAAGTGATAGTGTCCTTGGTGTATGTACAAACTCAACAGTT
GAATGCGGTGCTACCAACACTGATAAATGTATCCAATTCTCTTGTAATGAAGCCACCGGT
TGCCAACAATCAGCTGTCGTTTGTCCAGATGTTGGTAGTTGTTTAGTTGGTTATTGTGAT
AGTAAACAAGGTTGTCTCACCAAACCAAGATCTTGCGATACTGGTGTTTTCTGTTTAACT
GGTGAATGTATTGAAAATGCTGGTGGTTGTATCGTCTATGAAAAACGTTGTGATGCTGAT
AATGGAAGATGTCAACAAGGTGTATGTGTAAATAATACCGCCACTGAAGAAGGTTATTGT
AAATCTGAAGACTATGATCCATTACCATTCATTTGTAAAACTGGTGCTGTCGTTTCAACT
GCTGTCATTGCTGGTGTCACTGTCGCTGGTGCTGTTGCACTTGGTGTTTTCATTTATGGT
GGTAAAAGAGGTTATGACTATTGGAAAGAATCAAGAAATGTTCAATTCAGTGGTTCAAAT
TNTAATCCACTTTATGAACAAAATCCAAATGGTTCTGGTGTAAATCCATTATATAANATA
ATTCTGCATTATAAAATAAAATTAGTCTATATAAAT