>VHI402 (VHI402Q) /CSM/VH/VHI4-A/VHI402Q.Seq.d/
AAAATGAAATATTTATTAGTATATTTACACATATTACTATTTTGTTTATTAAAGATCAAT
AGCCAAAAGTATTGCACTTATAGTGGTGTTGGAGAAGATTATAATATCAAATTTGATGTC
TTACAAACATATGGTGTTGGTTTTCATTACTCATATTTAAGTGTTATTTTTACAACTTGT
AATTATACTATTCCTTGTGGTAGTAATAGTAATAATGTATTGTGTGGATCATATCCATCA
ATTGTTCCACGCAAGTATCTTTCATTGGGATTTGTTAATGGCAGTACACATAGTTATAGC
AAAGACGGACTAATGATAACATATATATCACAGGATACAACAAATGATAATGATTGCAAA
AGATATACAACAAATGTGATTTTTCAATGTAGACCAGATGGTGATGTATCCGATTCATTA
GATGTTGGCATCGACAATATACTTATTGATTCATGTATTGTTGAATTCACACTCTCTTCA
CGTACAGTGTGTCAAACATGTCCAAACTGTTTAAAAACACATCAAACATCATGTAATGTG
AAAAGTGGTTGGTGTACTTGTGATGGTAATACAAAAGGTTTAAATTGTGATCAATTAAAT
GCAAATATATCATCGGTATTAACACCXXXXXXXXXX

KMKYLLVYLHILLFCLLKINSQKYCTYSGVGEDYNIKFDVLQTYGVGFHYSYLSVIFTTC
NYTIPCGSNSNNVLCGSYPSIVPRKYLSLGFVNGSTHSYSKDGLMITYISQDTTNDNDCK
RYTTNVIFQCRPDGDVSDSLDVGIDNILIDSCIVEFTLSSRTVCQTCPNCLKTHQTSCNV
KSGWCTCDGNTKGLNCDQLNANISSVLT---

Frame A:
KMKYLLVYLHILLFCLLKINSQKYCTYSGVGEDYNIKFDVLQTYGVGFHYSYLSVIFTTC
NYTIPCGSNSNNVLCGSYPSIVPRKYLSLGFVNGSTHSYSKDGLMITYISQDTTNDNDCK
RYTTNVIFQCRPDGDVSDSLDVGIDNILIDSCIVEFTLSSRTVCQTCPNCLKTHQTSCNV
KSGWCTCDGNTKGLNCDQLNANISSVLT---


Frame B:
k*niy*yiytyyyfvy*rsiaksialivvlekiiisnlmsykhmvlvfithi*vlflqlv
iilflvvvivimycvdhihqlfhasifhwdllmavhiviaktd***hiyhriqqmimiak
diqqm*ffnvdqmvmypih*mlastiyllihvllnshslhvqcvkhvqtv*khikhhvm*
kvvgvlvmviqkv*ivin*mqiyhry*h---


Frame C:
neifisifthitilfikdq*pkvlhl*wcwrrl*yqi*cltniwcwfsllifkcyfynl*
lyyslw*****civwiisincstqvsfigic*wqyt*l*qrrtndniyitgynk***lqk
iynkcdfsm*trw*cirfircwhrqyty*fmyc*ihtlftysvsnmsklfkntsnim*ce
kwlvyl*w*ykrfkl*sikckyiigin---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHI402 (VHI402Q) /CSM/VH/VHI4-A/VHI402Q.Seq.d/                       1241   0.0
VHM647 (VHM647Q) /CSM/VH/VHM6-B/VHM647Q.Seq.d/                       1239   0.0
VHL566 (VHL566Q) /CSM/VH/VHL5-C/VHL566Q.Seq.d/                       1239   0.0
VHL563 (VHL563Q) /CSM/VH/VHL5-C/VHL563Q.Seq.d/                       1239   0.0
VHD437 (VHD437Q) /CSM/VH/VHD4-B/VHD437Q.Seq.d/                       1239   0.0
SHL423 (SHL423Q) /CSM/SH/SHL4-A/SHL423Q.Seq.d/                       1239   0.0
AHJ335 (AHJ335Q) /CSM/AH/AHJ3-B/AHJ335Q.Seq.d/                       1239   0.0
VHM628 (VHM628Q) /CSM/VH/VHM6-B/VHM628Q.Seq.d/                       1237   0.0
VHE106 (VHE106Q) /CSM/VH/VHE1-A/VHE106Q.Seq.d/                       1231   0.0
VHP763 (VHP763Q) /CSM/VH/VHP7-C/VHP763Q.Seq.d/                       1213   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ422782) Dictyostelium discoideum cDNA clone:ddv47d02, 5' ...  1241   0.0    1
(BJ425656) Dictyostelium discoideum cDNA clone:ddv56m12, 5' ...  1239   0.0    1
(BJ425109) Dictyostelium discoideum cDNA clone:ddv54m15, 5' ...  1239   0.0    1
(BJ425066) Dictyostelium discoideum cDNA clone:ddv54c17, 5' ...  1239   0.0    1
(BJ419834) Dictyostelium discoideum cDNA clone:ddv37j10, 5' ...  1239   0.0    1
(BJ397409) Dictyostelium discoideum cDNA clone:dds46n06, 5' ...  1239   0.0    1
(BJ335200) Dictyostelium discoideum cDNA clone:dda49f09, 5' ...  1239   0.0    1
(BJ425621) Dictyostelium discoideum cDNA clone:ddv56g08, 5' ...  1237   0.0    1
(BJ420388) Dictyostelium discoideum cDNA clone:ddv39k01, 5' ...  1231   0.0    1
(BJ423651) Dictyostelium discoideum cDNA clone:ddv49n24, 5' ...  1132   0.0    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117076_37(AC117076|pid:none) Dictyostelium discoideum chromoso...    80   4e-14
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso...    65   2e-09
CR933358_1(CR933358|pid:none) Mini antigen, Paramecium tetraurel...    45   0.002
CR759893_1(CR759893|pid:none) Zebrafish DNA sequence from clone ...    45   0.002
(P02468) RecName: Full=Laminin subunit gamma-1; AltName: Full=La...    43   0.009
(A0JP86) RecName: Full=Laminin subunit gamma-1; Flags: Precursor...    41   0.026
AX045119_1(AX045119|pid:none) Sequence 27 from Patent WO0066730.       40   0.074
AX045117_1(AX045117|pid:none) Sequence 25 from Patent WO0066730.       40   0.074
AB385108_1(AB385108|pid:none) Synthetic construct DNA, clone: pF...    40   0.074
BC165945_1(BC165945|pid:none) Synthetic construct Mus musculus c...    39   0.13

 psg: 0.93  gvh: 0.70  alm: 0.39  top: 0.37  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: extracellular, including cell wall
	 20.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  8.0 %: nuclear
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for VHI402 is exc

>VHI402F.Seq
AAAATGAAATATTTATTAGTATATTTACACATATTACTATTTTGTTTATTAAAGATCAAT
AGCCAAAAGTATTGCACTTATAGTGGTGTTGGAGAAGATTATAATATCAAATTTGATGTC
TTACAAACATATGGTGTTGGTTTTCATTACTCATATTTAAGTGTTATTTTTACAACTTGT
AATTATACTATTCCTTGTGGTAGTAATAGTAATAATGTATTGTGTGGATCATATCCATCA
ATTGTTCCACGCAAGTATCTTTCATTGGGATTTGTTAATGGCAGTACACATAGTTATAGC
AAAGACGGACTAATGATAACATATATATCACAGGATACAACAAATGATAATGATTGCAAA
AGATATACAACAAATGTGATTTTTCAATGTAGACCAGATGGTGATGTATCCGATTCATTA
GATGTTGGCATCGACAATATACTTATTGATTCATGTATTGTTGAATTCACACTCTCTTCA
CGTACAGTGTGTCAAACATGTCCAAACTGTTTAAAAACACATCAAACATCATGTAATGTG
AAAAGTGGTTGGTGTACTTGTGATGGTAATACAAAAGGTTTAAATTGTGATCAATTAAAT
GCAAATATATCATCGGTATTAACACCNNNNNNNNNN