>VHI165 (VHI165Q) /CSM/VH/VHI1-C/VHI165Q.Seq.d/
XXXXXXXXXXAATAGTTTCCCAAATGTTACAAAAGTAATTAAAGATCATGGTGCAAATAT
CATTGGTTTATTAGAATCTGATCTTTCAAGAGTTATGACTTCAAATAGAGATTTAGTTGA
ATGGATTGCAACTGAATTACATATGTATAGTGATTTTGGACCAGAACCATCAAGAAATAC
ATGGGGTTGTGCATTATTAACAATTTTCCCAATCATTTCATCAGATAGAGTTATTTTACC
ATCACCAGAAGGTGAACTTGCATGTCTTATCGATGCAGTATTATTAATTGATGAAACACC
AGTCAATGTTATTGTTACTCATTTTGGTAATACTGAAGATGTTTTAGATAGAAAATTACA
AACTGAAGGTGCTGCTGCAATCGTTAAAAAGAACGCTGATATGCCAATCATTTTCCTTAG
TTATATCACAACCAAAGTTAACACTGAAAACTATAATACTTTAAGAGCATCAGGTTTAGA
TGATACCACAAACGAAGGTCGTTATTGTCAATATATCTTTTATAAAAATTTACAACTTAA
CAAATTCCAAAGATTCTCAAGTTTCGATATCTCTGATACTGAACAACAAGTTGCATCTTT
TTCTGTTATAAAAGAAAATAAACAACAACAACAACAAACTGAACAACAAACTCAACAATA
ATTAAGTAAAAAATATAAACAATAAAAGAATTAAAAAAATTAAAATAAAATTTTTTTAAA
TAAAATTAGA

---SFPNVTKVIKDHGANIIGLLESDLSRVMTSNRDLVEWIATELHMYSDFGPEPSRNTW
GCALLTIFPIISSDRVILPSPEGELACLIDAVLLIDETPVNVIVTHFGNTEDVLDRKLQT
EGAAAIVKKNADMPIIFLSYITTKVNTENYNTLRASGLDDTTNEGRYCQYIFYKNLQLNK
FQRFSSFDISDTEQQVASFSVIKENKQQQQQTEQQTQQ*lskkykq*kn*kn*nkiflnk
ir

Frame A:
---ivsqmlqk*lkimvqislvy*nlifqel*lqiei*lnglqlnyicivildqnhqeih
gvvhy*qfsqsfhqielfyhhqkvnlhvlsmqyy*lmkhqsmllllilvilkmf*ienyk
lkvllqslkrtlicqsfslvisqpkltlktiil*ehqv*mipqtkvvivnisfikiynlt
nskdsqvsislilnnklhlfll*kkinnnnnklnnklnnn*vkninnkrikkikikff*i
kl


Frame B:
---*fpkcyksn*rswckyhwfiri*sfksydfk*rfs*mdcn*ityv**fwtrtikkym
glciinnfpnhfir*syftitrr*tcmsyrcsiin**ntsqcycysfw*y*rcfr*kitn
*rcccnr*ker*yanhfp*lyhnqs*h*kl*yfksirfr*yhkrrsllsiyll*kftt*q
ipkilkfryl*y*ttsciffcykrk*tttttn*ttnstiik*ki*tikelkklk*nffk*
n*


Frame C:
---SFPNVTKVIKDHGANIIGLLESDLSRVMTSNRDLVEWIATELHMYSDFGPEPSRNTW
GCALLTIFPIISSDRVILPSPEGELACLIDAVLLIDETPVNVIVTHFGNTEDVLDRKLQT
EGAAAIVKKNADMPIIFLSYITTKVNTENYNTLRASGLDDTTNEGRYCQYIFYKNLQLNK
FQRFSSFDISDTEQQVASFSVIKENKQQQQQTEQQTQQ*lskkykq*kn*kn*nkiflnk
ir

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AHQ874 (AHQ874Q) /CSM/AH/AHQ8-D/AHQ874Q.Seq.d/                       1207   0.0
VHQ376 (VHQ376Q) /CSM/VH/VHQ3-D/VHQ376Q.Seq.d/                       1207   0.0
VHQ330 (VHQ330Q) /CSM/VH/VHQ3-B/VHQ330Q.Seq.d/                       1207   0.0
VHP281 (VHP281Q) /CSM/VH/VHP2-D/VHP281Q.Seq.d/                       1207   0.0
VHK570 (VHK570Q) /CSM/VH/VHK5-C/VHK570Q.Seq.d/                       1207   0.0
VHJ124 (VHJ124Q) /CSM/VH/VHJ1-A/VHJ124Q.Seq.d/                       1207   0.0
VHI165 (VHI165Q) /CSM/VH/VHI1-C/VHI165Q.Seq.d/                       1207   0.0
VHE320 (VHE320Q) /CSM/VH/VHE3-A/VHE320Q.Seq.d/                       1207   0.0
VHD494 (VHD494Q) /CSM/VH/VHD4-D/VHD494Q.Seq.d/                       1207   0.0
VHC807 (VHC807Q) /CSM/VH/VHC8-A/VHC807Q.Seq.d/                       1207   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   946   0.0    12
BX572093|BX572093.1 Prochlorococcus marinus MED4 complete genome; segment 4/5.    36   0.082  11
AC093857|AC093857.2 Homo sapiens BAC clone RP11-525J21 from 4, complete sequence.    48   0.17   1
AE014016|AE014016.1 Buchnera aphidicola str. Bp (Baizongia pistaciae), section 1 of 2 of the complete genome.    34   0.23   8
AE007609|AE007609.1 Clostridium acetobutylicum ATCC824 section 97 of 356 of the complete genome.    34   0.38   3
AP003193|AP003193.2 Clostridium perfringens str. 13 DNA, complete genome, section 9/10.    36   0.62   11
BS000088|BS000088.1 Pan troglodytes chromosome 22 clone:RP43-078B15, map 22, complete sequences.    46   0.69   1
BX248389|BX248389.4 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-236C4.    40   1.0    4
AC004153|AC004153.7 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    34   1.3    8
AP001667|AP001667.1 Homo sapiens genomic DNA, chromosome 21q, section 11/105.    34   1.4    11

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116305_23(AC116305|pid:none) Dictyostelium discoideum chromoso...   409   e-113
FN392319_424(FN392319|pid:none) Pichia pastoris GS115 chromosome...   165   1e-39
CR382121_463(CR382121|pid:none) Kluyveromyces lactis strain NRRL...   165   2e-39
CR380958_339(CR380958|pid:none) Candida glabrata strain CBS138 c...   159   1e-37
CR382131_1390(CR382131|pid:none) Yarrowia lipolytica strain CLIB...   156   7e-37
CU928180_569(CU928180|pid:none) Kluyveromyces thermotolerans str...   155   1e-36
S19427(S19427)probable membrane protein YCR017c - yeast (Sacchar...   155   2e-36
AP007151_1087(AP007151|pid:none) Aspergillus oryzae RIB40 genomi...   154   3e-36
(P25618) RecName: Full=Protein CWH43; AltName: Full=Calcofluor w...   154   4e-36
FM992695_119(FM992695|pid:none) Candida dubliniensis CD36 chromo...   154   4e-36

 psg: 0.86  gvh: 0.45  alm: 0.34  top: 0.43  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: vesicles of secretory system

>> prediction for VHI165 is cyt

>VHI165Z.Seq
NNNNNNNNNNAATAGTTTCCCAAATGTTACAAAAGTAATTAAAGATCATGGTGCAAATAT
CATTGGTTTATTAGAATCTGATCTTTCAAGAGTTATGACTTCAAATAGAGATTTAGTTGA
ATGGATTGCAACTGAATTACATATGTATAGTGATTTTGGACCAGAACCATCAAGAAATAC
ATGGGGTTGTGCATTATTAACAATTTTCCCAATCATTTCATCAGATAGAGTTATTTTACC
ATCACCAGAAGGTGAACTTGCATGTCTTATCGATGCAGTATTATTAATTGATGAAACACC
AGTCAATGTTATTGTTACTCATTTTGGTAATACTGAAGATGTTTTAGATAGAAAATTACA
AACTGAAGGTGCTGCTGCAATCGTTAAAAAGAACGCTGATATGCCAATCATTTTCCTTAG
TTATATCACAACCAAAGTTAACACTGAAAACTATAATACTTTAAGAGCATCAGGTTTAGA
TGATACCACAAACGAAGGTCGTTATTGTCAATATATCTTTTATAAAAATTTACAACTTAA
CAAATTCCAAAGATTCTCAAGTTTCGATATCTCTGATACTGAACAACAAGTTGCATCTTT
TTCTGTTATAAAAGAAAATAAACAACAACAACAACAAACTGAACAACAAACTCAACAATA
ATTAAGTAAAAAATATAAACAATAAAAGAATTAAAAAAATTAAAATAAAATTTTTTTAAA
TAAAATTAGA