>VHI137 (VHI137Q) /CSM/VH/VHI1-B/VHI137Q.Seq.d/
XXXXXXXXXXATTTAGTGAATCATCAAATTCAATTCTTTTTAATTCAACAATTATTTTAG
ATAGAGGTGATATGAAAATTAAAGTTGGATCAACATTAGAACTTTTAAATACTAAATTGA
TAAATAAAAATGCCAATATGAATATCAATGGTAATATTTATATTAATACCAATAGTAGTA
TGACAAATGGTGCCAACTTTAAATTAAATTCAAATATTCTTCCATTGAATAATTCTGGTA
CTGAAGAGTTTGATAATCAAGGTTACTTTGATATTGTAAAGGGTGCAAATGAATCAATTA
TTATGGTTCCAGTTAGAAATAGTGGTACAATTAATGTTGGTAGAGAAACTACAATTATTT
CATTCACTTCAACCAATGGTACTATAATTGTTAATCCAAATGCAACTCTTCATTCAAATA
ACACTTTTATAATTTCAAATAGTAGTGTACAAGGTAGTGGTGTAATTAATTCATCAATTT
CATCAAATGGTGGATCAAGTTATGGTAACGATACAATCACAAACTTGGATATTAATGGTA
ATTTAGAATCAAATGAAGATGAATTTATATTTACATTGGATGGTAAAAACTCTACAACTA
TTAATATTGGTAATAATGCAACCATTACAAATGCTACTTTAATCATTAGAGTTAGTAATG
ATATTGTAAATTCAACCCTAANTGCTACCTCA

---FSESSNSILFNSTIILDRGDMKIKVGSTLELLNTKLINKNANMNINGNIYINTNSSM
TNGANFKLNSNILPLNNSGTEEFDNQGYFDIVKGANESIIMVPVRNSGTINVGRETTIIS
FTSTNGTIIVNPNATLHSNNTFIISNSSVQGSGVINSSISSNGGSSYGNDTITNLDINGN
LESNEDEFIFTLDGKNSTTINIGNNATITNATLIIRVSNDIVNSTLXATS

Frame A:
---FSESSNSILFNSTIILDRGDMKIKVGSTLELLNTKLINKNANMNINGNIYINTNSSM
TNGANFKLNSNILPLNNSGTEEFDNQGYFDIVKGANESIIMVPVRNSGTINVGRETTIIS
FTSTNGTIIVNPNATLHSNNTFIISNSSVQGSGVINSSISSNGGSSYGNDTITNLDINGN
LESNEDEFIFTLDGKNSTTINIGNNATITNATLIIRVSNDIVNSTLXATS


Frame B:
---lvnhqiqffliqqlf*ievi*klkldqh*nf*iln**ikmpi*ismvifilipivv*
qmvptln*iqiffh*iilvlksliikvtlil*rvqmnqllwfqleivvqlmlveklqlfh
slqpmvl*lliqmqlfiqitll*fqivvykvvv*lihqfhqmvdqvmvtiqsqtwilmvi
*nqmkmnlylhwmvktlqllilvimqplqmll*slelvmil*iqp*xlp


Frame C:
---**iikfnsf*fnnyfr*r*yen*swinirtfky*idk*kcqyeyqw*yly*yq**yd
kwcql*ikfkyssie*fwy*rv**srll*yckgck*inyygss*k*wyn*cw*rnynyfi
hfnqwyync*skcnssfk*hfynfk**ctr*wcn*finfikwwiklw*rynhklgy*w*f
rik*r*iyiyigw*klyny*yw**cnhykcyfnh*s***yckfnpxcyl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHI137 (VHI137Q) /CSM/VH/VHI1-B/VHI137Q.Seq.d/                       1346   0.0
VHN394 (VHN394Q) /CSM/VH/VHN3-D/VHN394Q.Seq.d/                       1320   0.0
VHP481 (VHP481Q) /CSM/VH/VHP4-D/VHP481Q.Seq.d/                       1183   0.0
VHH520 (VHH520Q) /CSM/VH/VHH5-A/VHH520Q.Seq.d/                        617   e-175
VHH794 (VHH794Q) /CSM/VH/VHH7-D/VHH794Q.Seq.d/                        605   e-172
VHH521 (VHH521Q) /CSM/VH/VHH5-A/VHH521Q.Seq.d/                        585   e-166
VHA340 (VHA340Q) /CSM/VH/VHA3-B/VHA340Q.Seq.d/                        569   e-161
VHC580 (VHC580Q) /CSM/VH/VHC5-D/VHC580Q.Seq.d/                        565   e-160
VHD329 (VHD329Q) /CSM/VH/VHD3-B/VHD329Q.Seq.d/                        561   e-159
VHE339 (VHE339Q) /CSM/VH/VHE3-B/VHE339Q.Seq.d/                        559   e-158

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    38   1e-10  18
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete genome, section 1/2.    36   3e-07  17
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, complete genome.    40   5e-07  15
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    34   2e-06  21
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.           34   3e-06  25
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           36   6e-06  25
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    42   1e-05  16
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    40   1e-05  19
AL844506|AL844506.1 Plasmodium falciparum chromosome  7.           34   3e-05  26
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence.    34   5e-05  14

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY698035_1(AY698035|pid:none) Desmognathus marmoratus isolate 69...    40   0.067
AY612344_1(AY612344|pid:none) Desmognathus marmoratus voucher KH...    40   0.088
DQ018662_1(DQ018662|pid:none) Plethodon dunni isolate 75356 NADH...    37   0.57
AY612348_1(AY612348|pid:none) Desmognathus quadramaculatus vouch...    36   1.3
AY698038_1(AY698038|pid:none) Desmognathus marmoratus isolate T0...    36   1.3
AY698041_1(AY698041|pid:none) Desmognathus marmoratus isolate T0...    36   1.3
CP000270_2676(CP000270|pid:none) Burkholderia xenovorans LB400 c...    35   1.7
CP000958_1165(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ...    35   2.2
CP000319_3365(CP000319|pid:none) Nitrobacter hamburgensis X14, c...    35   2.2
CP000647_1382(CP000647|pid:none) Klebsiella pneumoniae subsp. pn...    35   2.8

 psg: 0.75  gvh: 0.35  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	  4.0 %: mitochondrial
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for VHI137 is cyt

>VHI137Z.Seq
NNNNNNNNNNATTTAGTGAATCATCAAATTCAATTCTTTTTAATTCAACAATTATTTTAG
ATAGAGGTGATATGAAAATTAAAGTTGGATCAACATTAGAACTTTTAAATACTAAATTGA
TAAATAAAAATGCCAATATGAATATCAATGGTAATATTTATATTAATACCAATAGTAGTA
TGACAAATGGTGCCAACTTTAAATTAAATTCAAATATTCTTCCATTGAATAATTCTGGTA
CTGAAGAGTTTGATAATCAAGGTTACTTTGATATTGTAAAGGGTGCAAATGAATCAATTA
TTATGGTTCCAGTTAGAAATAGTGGTACAATTAATGTTGGTAGAGAAACTACAATTATTT
CATTCACTTCAACCAATGGTACTATAATTGTTAATCCAAATGCAACTCTTCATTCAAATA
ACACTTTTATAATTTCAAATAGTAGTGTACAAGGTAGTGGTGTAATTAATTCATCAATTT
CATCAAATGGTGGATCAAGTTATGGTAACGATACAATCACAAACTTGGATATTAATGGTA
ATTTAGAATCAAATGAAGATGAATTTATATTTACATTGGATGGTAAAAACTCTACAACTA
TTAATATTGGTAATAATGCAACCATTACAAATGCTACTTTAATCATTAGAGTTAGTAATG
ATATTGTAAATTCAACCCTAANTGCTACCTCA