>VHI108 (VHI108Q) /CSM/VH/VHI1-A/VHI108Q.Seq.d/
XXXXXXXXXXTCACCATACATTCAAACCTTGGAGAATTCAAGTGAATCACCAGTGTTGGT
AGATCTTAGTTCCGATCATAGATTCAATGAAAAATGGACCTATGGTCAACCAGAAACCAA
TCGTGCAGCAATTAAAGAATCCAAATTAATCGCCAATCCAGGTTGTTATGCAACTGGTAT
GTTTTTAACATTGAAGCCATTTGTCAATGATTTAGTAACACCACCATCTTGTTTTGGTAT
TTCAGGTTATTCCGGTGCTGGTAGTAAACCATCTGAAAAGAATGATCCAACACGTCTAAG
TGATAATATCTTACCTTACAAATTGGTTCAACATACTCATGAACTTGAGGTTAGTCATCA
ATTGGGTAGTCCAATCTATTTCATGCCACATGTTGGTCAATTCTTTCAAGGTATTACCCT
TACAATCTCAATGGAACTCAAATATCCAATGACCAAAGAACAAGTGGTCGAACGTTATCA
AAAATTCTATCAAAATGAACCGTTAATTAAAATCGATAAAGATGGTATTCCAGAGGTTAA
ATCAAATAGTGGTAAACATACTGTTACAATTGGTGGTTTTGCTGTCAATGGTAATCATTT
AGTTGTCGTAACCACTTTAGATAATTTATTAAA

---PYIQTLENSSESPVLVDLSSDHRFNEKWTYGQPETNRAAIKESKLIANPGCYATGMF
LTLKPFVNDLVTPPSCFGISGYSGAGSKPSEKNDPTRLSDNILPYKLVQHTHELEVSHQL
GSPIYFMPHVGQFFQGITLTISMELKYPMTKEQVVERYQKFYQNEPLIKIDKDGIPEVKS
NSGKHTVTIGGFAVNGNHLVVVTTLDNLL

Frame A:
---hhtfkpwriqvnhqcw*ilvpiidsmkngpmvnqkpivqqlknpn*spiqvvmqlvc
f*h*shlsmi**hhhlvlvfqvipvlvvnhlkrmiqhv*viisyltnwfnilmnlrlvin
wvvqsischmlvnsfkvlplqsqwnsniq*pknkwsnviknsikmnr*lksikmvfqrln
qivvnillqlvvllsmvii*ls*pl*iiy*


Frame B:
---tihsnlgefk*itsvgrs*frs*iq*kmdlwstrnqscsn*riqinrqsrllcnwyv
fnieaicq*fsnttilfwyfrlfrcw**ti*ke*sntsk**yltlqigstys*t*g*ssi
g*snlfhatcwsilsryypynlngtqisndqrtsgrtlskilsk*tvn*nr*rwysrg*i
k*w*tycynwwfccqw*sfscrnhfr*fik


Frame C:
---PYIQTLENSSESPVLVDLSSDHRFNEKWTYGQPETNRAAIKESKLIANPGCYATGMF
LTLKPFVNDLVTPPSCFGISGYSGAGSKPSEKNDPTRLSDNILPYKLVQHTHELEVSHQL
GSPIYFMPHVGQFFQGITLTISMELKYPMTKEQVVERYQKFYQNEPLIKIDKDGIPEVKS
NSGKHTVTIGGFAVNGNHLVVVTTLDNLL

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHI108 (VHI108Q) /CSM/VH/VHI1-A/VHI108Q.Seq.d/                       1235   0.0
AHE809 (AHE809Q) /CSM/AH/AHE8-A/AHE809Q.Seq.d/                       1235   0.0
VHJ741 (VHJ741Q) /CSM/VH/VHJ7-B/VHJ741Q.Seq.d/                       1229   0.0
SHK272 (SHK272Q) /CSM/SH/SHK2-C/SHK272Q.Seq.d/                       1215   0.0
VHJ479 (VHJ479Q) /CSM/VH/VHJ4-D/VHJ479Q.Seq.d/                       1213   0.0
AHB227 (AHB227Q) /CSM/AH/AHB2-B/AHB227Q.Seq.d/                       1187   0.0
CHM268 (CHM268Q) /CSM/CH/CHM2-C/CHM268Q.Seq.d/                       1168   0.0
AHE324 (AHE324Q) /CSM/AH/AHE3-A/AHE324Q.Seq.d/                       1160   0.0
AHJ453 (AHJ453Q) /CSM/AH/AHJ4-C/AHJ453Q.Seq.d/                       1126   0.0
AHF679 (AHF679Q) /CSM/AH/AHF6-D/AHF679Q.Seq.d/                       1122   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AL425928|AL425928.1 clone BA0AB008G09 of library BA0AB from strain CLIB 210 of Kluyveromyces lactis.    60   4e-05  1
AC092761|AC092761.1 Papio cynocephalus anubis clone RP41-64C11, WORKING DRAFT SEQUENCE, 1 ordered pieces.    38   0.22   5
AC092515|AC092515.2 Papio cynocephalus anubis clone RP41-66O1, WORKING DRAFT SEQUENCE, 2 ordered pieces.    38   0.30   4
AC138190|AC138190.1 Mus musculus clone RP23-224G5, LOW-PASS SEQUENCE SAMPLING.    36   0.43   5
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    36   1.7    11
AC102471|AC102471.3 Mus musculus clone RP24-374A6, WORKING DRAFT SEQUENCE, 2 ordered pieces.    34   1.7    5
AC120816|AC120816.4 Rattus norvegicus clone CH230-347G6, WORKING DRAFT SEQUENCE, 4 unordered pieces.    38   2.0    7
AC108850|AC108850.2 Mus musculus clone RP24-85N11, WORKING DRAFT SEQUENCE, 7 unordered pieces.    44   2.3    1
AC107834|AC107834.9 Mus musculus chromosome 1 clone RP23-251L12 map 1, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.    44   2.3    1
AC100895|AC100895.2 Mus musculus clone RP23-69G5, LOW-PASS SEQUENCE SAMPLING.    44   2.3    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013598_2615(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K...   217   3e-55
CP000967_1954(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P...   214   2e-54
(Q2P2F6) RecName: Full=N-acetyl-gamma-glutamyl-phosphate reducta...   214   2e-54
(Q3BSI7) RecName: Full=N-acetyl-gamma-glutamyl-phosphate reducta...   214   2e-54
(B0RS54) RecName: Full=N-acetyl-gamma-glutamyl-phosphate reducta...   209   4e-53
(B2FMD7) RecName: Full=N-acetyl-gamma-glutamyl-phosphate reducta...   208   1e-52
CP001111_2719(CP001111|pid:none) Stenotrophomonas maltophilia R5...   207   3e-52
(Q4UVI5) RecName: Full=N-acetyl-gamma-glutamyl-phosphate reducta...   204   1e-51
CU928175_343(CU928175|pid:none) Zygosaccharomyces rouxii strain ...   202   5e-51
CP000941_285(CP000941|pid:none) Xylella fastidiosa M12, complete...   198   9e-50

 psg: 0.75  gvh: 0.29  alm: 0.41  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: plasma membrane
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for VHI108 is cyt

>VHI108Z.Seq
NNNNNNNNNNTCACCATACATTCAAACCTTGGAGAATTCAAGTGAATCACCAGTGTTGGT
AGATCTTAGTTCCGATCATAGATTCAATGAAAAATGGACCTATGGTCAACCAGAAACCAA
TCGTGCAGCAATTAAAGAATCCAAATTAATCGCCAATCCAGGTTGTTATGCAACTGGTAT
GTTTTTAACATTGAAGCCATTTGTCAATGATTTAGTAACACCACCATCTTGTTTTGGTAT
TTCAGGTTATTCCGGTGCTGGTAGTAAACCATCTGAAAAGAATGATCCAACACGTCTAAG
TGATAATATCTTACCTTACAAATTGGTTCAACATACTCATGAACTTGAGGTTAGTCATCA
ATTGGGTAGTCCAATCTATTTCATGCCACATGTTGGTCAATTCTTTCAAGGTATTACCCT
TACAATCTCAATGGAACTCAAATATCCAATGACCAAAGAACAAGTGGTCGAACGTTATCA
AAAATTCTATCAAAATGAACCGTTAATTAAAATCGATAAAGATGGTATTCCAGAGGTTAA
ATCAAATAGTGGTAAACATACTGTTACAATTGGTGGTTTTGCTGTCAATGGTAATCATTT
AGTTGTCGTAACCACTTTAGATAATTTATTAAA