>VHH226 (VHH226Q) /CSM/VH/VHH2-B/VHH226Q.Seq.d/
XXXXXXXXXXCTATGTATATCAATCACTCTCCTTGTGGCAACATATTCTTCATGATATGT
TTAAACTTTGGTACTTTGCAGAAATTGATCTTTTATGCGGACACAGATATCAATTATCAA
ACACTGGTCAAGGTCTAAATCGTATTCAACAATGTCCAAACGTTGGTAAAATTATGCATA
GTATTCTACGTCAAACTCAAAAAAAAGTTGGTGATGATTGGGTTGGTTCTTCCGTTATTC
ATTTGGGTGATCATAACGTTCCAAACTCTTTGGTTTTCATCGATAAATACACTCAAATCT
CTAGAATCCTAAGTCCAATCGTTTTAACCATTGAATATATTCCAAAGATCACCGATCCAA
ATTTAGTTGCTTACATCAAAAACACCTTTGGTGGTCCACAAACTTTAACCAAAATCATCC
TTTGTGATTTCTTTAAACACGCTTTCGATGGTAGTGGTGCCGATAACTTTTTCGATGCTG
GCTCTTGTATTGATGGTAGATTAACTTCTGCTTGGCAATGGTCTGCTCAAATCGCAAA

---YVYQSLSLWQHILHDMFKLWYFAEIDLLCGHRYQLSNTGQGLNRIQQCPNVGKIMHS
ILRQTQKKVGDDWVGSSVIHLGDHNVPNSLVFIDKYTQISRILSPIVLTIEYIPKITDPN
LVAYIKNTFGGPQTLTKIILCDFFKHAFDGSGADNFFDAGSCIDGRLTSAWQWSAQIA

Frame A:
---YVYQSLSLWQHILHDMFKLWYFAEIDLLCGHRYQLSNTGQGLNRIQQCPNVGKIMHS
ILRQTQKKVGDDWVGSSVIHLGDHNVPNSLVFIDKYTQISRILSPIVLTIEYIPKITDPN
LVAYIKNTFGGPQTLTKIILCDFFKHAFDGSGADNFFDAGSCIDGRLTSAWQWSAQIA


Frame B:
---myinhspcgniffmiclnfgtlqklifyadtdinyqtlvkv*ivfnnvqtlvklciv
fyvklkkklvmiglvlplfiwviitfqtlwfssintlksles*vqsf*plnifqrspiqi
*lltsktplvvhkl*pkssfvislntlsmvvvpitfsmlalvlmvd*lllgngllksq


Frame C:
---cisitllvatyss*yv*tlvlcrn*sfmrtqisiikhwsrsksystmskrw*nya*y
stsnskksw**lgwffrysfg*s*rsklfgfhr*ihsnl*npksnrfnh*iyskdhrskf
sclhqkhlwwstnfnqnhpl*fl*trfrw*wcr*lfrcwlly*w*infclamvcsnrk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHP208 (VHP208Q) /CSM/VH/VHP2-A/VHP208Q.Seq.d/                        999   0.0
VHO745 (VHO745Q) /CSM/VH/VHO7-B/VHO745Q.Seq.d/                        999   0.0
VHK760 (VHK760Q) /CSM/VH/VHK7-C/VHK760Q.Seq.d/                        999   0.0
VHI553 (VHI553Q) /CSM/VH/VHI5-C/VHI553Q.Seq.d/                        999   0.0
VHI541 (VHI541Q) /CSM/VH/VHI5-B/VHI541Q.Seq.d/                        999   0.0
VHH226 (VHH226Q) /CSM/VH/VHH2-B/VHH226Q.Seq.d/                        999   0.0
VHE160 (VHE160Q) /CSM/VH/VHE1-C/VHE160Q.Seq.d/                        999   0.0
VHD241 (VHD241Q) /CSM/VH/VHD2-B/VHD241Q.Seq.d/                        999   0.0
VHC810 (VHC810Q) /CSM/VH/VHC8-A/VHC810Q.Seq.d/                        999   0.0
VHC753 (VHC753Q) /CSM/VH/VHC7-C/VHC753Q.Seq.d/                        999   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ382217) Dictyostelium discoideum cDNA clone:ddc44c03, 3' ...   658   0.0    2
(BJ445959) Dictyostelium discoideum cDNA clone:ddv61o02, 3' ...   658   0.0    2
(BJ382757) Dictyostelium discoideum cDNA clone:ddc45d21, 3' ...   658   0.0    2
(BJ380513) Dictyostelium discoideum cDNA clone:ddc38m09, 3' ...   658   0.0    2
(BJ385500) Dictyostelium discoideum cDNA clone:ddc55m01, 3' ...   658   0.0    2
(BJ436848) Dictyostelium discoideum cDNA clone:ddv32m09, 3' ...   658   0.0    2
(BJ442024) Dictyostelium discoideum cDNA clone:ddv48i13, 3' ...   658   0.0    2
(BJ404947) Dictyostelium discoideum cDNA clone:dds30j05, 3' ...   658   0.0    2
(BJ378837) Dictyostelium discoideum cDNA clone:ddc33a06, 3' ...   658   0.0    2
(BJ445708) Dictyostelium discoideum cDNA clone:ddv60j11, 3' ...   658   0.0    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001575_110(CP001575|pid:none) Micromonas sp. RCC299 chromosome...   224   1e-57
CR940353_528(CR940353|pid:none) Theileria annulata strain Ankara...   217   1e-55
CR382131_1131(CR382131|pid:none) Yarrowia lipolytica strain CLIB...   214   9e-55
CP001142_478(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1...   190   2e-47
AM910996_269(AM910996|pid:none) Plasmodium knowlesi strain H chr...   187   1e-46
AL844507_105(AL844507|pid:none) Plasmodium falciparum 3D7 chromo...   187   2e-46
CR380956_239(CR380956|pid:none) Candida glabrata strain CBS138 c...   181   1e-44
CR382125_995(CR382125|pid:none) Kluyveromyces lactis strain NRRL...   177   2e-43
CU928179_226(CU928179|pid:none) Zygosaccharomyces rouxii strain ...   176   3e-43
AE016819_283(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...   175   7e-43

 psg: 0.83  gvh: 0.35  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: endoplasmic reticulum

>> prediction for VHH226 is cyt

>VHH226Z.Seq
NNNNNNNNNNCTATGTATATCAATCACTCTCCTTGTGGCAACATATTCTTCATGATATGT
TTAAACTTTGGTACTTTGCAGAAATTGATCTTTTATGCGGACACAGATATCAATTATCAA
ACACTGGTCAAGGTCTAAATCGTATTCAACAATGTCCAAACGTTGGTAAAATTATGCATA
GTATTCTACGTCAAACTCAAAAAAAAGTTGGTGATGATTGGGTTGGTTCTTCCGTTATTC
ATTTGGGTGATCATAACGTTCCAAACTCTTTGGTTTTCATCGATAAATACACTCAAATCT
CTAGAATCCTAAGTCCAATCGTTTTAACCATTGAATATATTCCAAAGATCACCGATCCAA
ATTTAGTTGCTTACATCAAAAACACCTTTGGTGGTCCACAAACTTTAACCAAAATCATCC
TTTGTGATTTCTTTAAACACGCTTTCGATGGTAGTGGTGCCGATAACTTTTTCGATGCTG
GCTCTTGTATTGATGGTAGATTAACTTCTGCTTGGCAATGGTCTGCTCAAATCGCAAA