>VHG139 (VHG139Q) /CSM/VH/VHG1-B/VHG139Q.Seq.d/
XXXXXXXXXXANATAAGAAAGCCACTGAAGTCGCTTTAGCCACCANAAANANAAAAGGTT
TAGCCCCAGCAATCCCAGATCTTGACAAATTCCACGAAAAACTCTAAACAATNTAAGTCG
CAC

---XKKATEVALATXXXKGLAPAIPDLDKFHEKL*tx*va

Frame A:
---XKKATEVALATXXXKGLAPAIPDLDKFHEKL*tx*va


Frame B:
---irkplksl*ppxxxkv*pqqsqiltnstknskqxksh


Frame C:
---*esh*srfshxkxkrfspsnprs*qiprktlnnxsr

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHG139 (VHG139Q) /CSM/VH/VHG1-B/VHG139Q.Seq.d/                        196   5e-50
VHP874 (VHP874Q) /CSM/modify/h12/F/treated/VHP874Q.Seq.d/             188   1e-47
VHH874 (VHH874Q) /CSM/VH/VHH8-D/VHH874Q.Seq.d/                        188   1e-47
VHG874 (VHG874Q) /CSM/VH/VHG8-D/VHG874Q.Seq.d/                        188   1e-47
VSB147 (VSB147Q) /CSM/VS/VSB1-B/VSB147Q.Seq.d/                        188   1e-47
VHQ491 (VHQ491Q) /CSM/VH/VHQ4-D/VHQ491Q.Seq.d/                        188   1e-47
VHQ483 (VHQ483Q) /CSM/VH/VHQ4-D/VHQ483Q.Seq.d/                        188   1e-47
VHQ480 (VHQ480Q) /CSM/VH/VHQ4-D/VHQ480Q.Seq.d/                        188   1e-47
VHQ476 (VHQ476Q) /CSM/VH/VHQ4-D/VHQ476Q.Seq.d/                        188   1e-47
VHQ473 (VHQ473Q) /CSM/VH/VHQ4-D/VHQ473Q.Seq.d/                        188   1e-47

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ440352) Dictyostelium discoideum cDNA clone:ddv43m09, 3' ...   196   1e-46  1
(AU285046) Dictyostelium discoideum gamete cDNA clone:FCL-AC...   188   3e-44  1
(AU284456) Dictyostelium discoideum gamete cDNA clone:FC-AW2...   188   3e-44  1
(AU284442) Dictyostelium discoideum gamete cDNA clone:FC-AV2...   188   3e-44  1
(AU284361) Dictyostelium discoideum gamete cDNA clone:FC-AO2...   188   3e-44  1
(AU284355) Dictyostelium discoideum gamete cDNA clone:FC-AO1...   188   3e-44  1
(AU261850) Dictyostelium discoideum vegetative cDNA clone:VS...   188   3e-44  1
(AU054030) Dictyostelium discoideum slug cDNA, clone SLK455.      188   3e-44  1
(AU053878) Dictyostelium discoideum slug cDNA, clone SLJ855.      188   3e-44  1
(AU053548) Dictyostelium discoideum slug cDNA, clone SLI884.      188   3e-44  1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 163,234,389

 psg: 0.86  gvh: 0.51  alm: 0.50  top: 0.37  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: extracellular, including cell wall
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for VHG139 is cyt

>VHG139Z.Seq
NNNNNNNNNNANATAAGAAAGCCACTGAAGTCGCTTTAGCCACCANAAANANAAAAGGTT
TAGCCCCAGCAATCCCAGATCTTGACAAATTCCACGAAAAACTCTAAACAATNTAAGTCG
CAC