>VHF656 (VHF656Q) /CSM/VH/VHF6-C/VHF656Q.Seq.d/
XXXXXXXXXXTCCCNAAAANCCCCCCCCCCCNAAAAAAAAAAAAAAAAAAAAAAAATAAT
AAAAATAATAAAAATAAAAATAATAAAAAATAATTAAAAAATACGTATCAGATATTTTTT
TTTGTTTTTTTAGATCAAATTTAAAAGTGACGAACCATTAATTTACATGGGATAATTAAA
CAAATATCAGTAGTGTTGGATTGGTTATTTGCTTCCACTTTTGCTTTCANGGAGCTCAGA
TATATCACA

---pkxpppxkkkkkkknnknnknknnkk*lkntyqifffvfldqi*k*RTINLHGIIKQ
ISVVLDWLFASTFAFXELRYIT

Frame A:
---pxxppppkkkkkkkk**k**k*k**kiikkyvsdiffcffrsnlkvtnh*ftwdn*t
nissvglvicfhfcfxgaqiyh


Frame B:
---pkxpppxkkkkkkknnknnknknnkk*lkntyqifffvfldqi*k*RTINLHGIIKQ
ISVVLDWLFASTFAFXELRYIT


Frame C:
---xkxpppxkkkkkkkiikiikikiiknn*kiriryfflff*ikfksdepliymg*lnk
yq*cwigyllplllsxssdis

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHF656 (VHF656Q) /CSM/VH/VHF6-C/VHF656Q.Seq.d/                        228   3e-59
VSI389 (VSI389Q) /CSM/VS/VSI3-D/VSI389Q.Seq.d/                         32   3.7
VSH442 (VSH442Q) /CSM/VS/VSH4-B/VSH442Q.Seq.d/                         32   3.7
VFC724 (VFC724Q) /CSM/VF/VFC7-A/VFC724Q.Seq.d/                         32   3.7
SSM535 (SSM535Q) /CSM/SS/SSM5-B/SSM535Q.Seq.d/                         32   3.7
SLE552 (SLE552Q) /CSM/SL/SLE5-C/SLE552Q.Seq.d/                         32   3.7
SHJ330 (SHJ330Q) /CSM/SH/SHJ3-B/SHJ330Q.Seq.d/                         32   3.7
AFJ575 (AFJ575Q) /CSM/AF/AFJ5-D/AFJ575Q.Seq.d/                         32   3.7
AFI807 (AFI807Q) /CSM/AF/AFI8-A/AFI807Q.Seq.d/                         32   3.7

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ440121) Dictyostelium discoideum cDNA clone:ddv42o14, 3' ...   228   4e-58  2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...   172   4e-39  1
(AP001694) Homo sapiens genomic DNA, chromosome 21q, section...    38   2.2    2
(DU269118) 1098589019347 CHORI-243 Ovis aries genomic clone ...    42   8.8    1
(CL943106) OA_ABa0061H14.r OA_ABa Oryza australiensis genomi...    42   8.8    1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 233,904,899

 psg: 0.76  gvh: 0.69  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.34  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for VHF656 is cyt

>VHF656Z.Seq
NNNNNNNNNNTCCCNAAAANCCCCCCCCCCCNAAAAAAAAAAAAAAAAAAAAAAAATAAT
AAAAATAATAAAAATAAAAATAATAAAAAATAATTAAAAAATACGTATCAGATATTTTTT
TTTGTTTTTTTAGATCAAATTTAAAAGTGACGAACCATTAATTTACATGGGATAATTAAA
CAAATATCAGTAGTGTTGGATTGGTTATTTGCTTCCACTTTTGCTTTCANGGAGCTCAGA
TATATCACA