>VHF217 (VHF217Q) /CSM/VH/VHF2-A/VHF217Q.Seq.d/
AATTATATTATAAATTTATACTCATTTATTGGTTTGATNGNGTNCATATAAAAAGTTATT
AAATAAATAAATAATAATAATAATAATAATANCAATATTAATAATAATAATAAAATATAT
TTTAAAAAAAAAATAAAANTAAAATAAAAATXXXXXXXXXX

nyiinlysfiglxxxi*kvik*INNNNNNNXNINNNNKIYFKKKIKXK*k---

Frame A:
nyiinlysfiglxxxi*kvik*INNNNNNNXNINNNNKIYFKKKIKXK*k---


Frame B:
iil*iythllv*xxxykkllnk*iiiiiiixiliiiikyilkkk*x*nk---


Frame C:
lyykfiliywfdxvhiksy*ink******xqy*****nif*kknkxkik---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHP107 (VHP107Q) /CSM/VH/VHP1-A/VHP107Q.Seq.d/                        100   1e-20
VHO776 (VHO776Q) /CSM/VH/VHO7-D/VHO776Q.Seq.d/                        100   1e-20
VHO631 (VHO631Q) /CSM/VH/VHO6-B/VHO631Q.Seq.d/                        100   1e-20
VHM669 (VHM669Q) /CSM/VH/VHM6-C/VHM669Q.Seq.d/                        100   1e-20
VHM414 (VHM414Q) /CSM/VH/VHM4-A/VHM414Q.Seq.d/                        100   1e-20
VHK765 (VHK765Q) /CSM/VH/VHK7-C/VHK765Q.Seq.d/                        100   1e-20
VHK449 (VHK449Q) /CSM/VH/VHK4-C/VHK449Q.Seq.d/                        100   1e-20
VHJ785 (VHJ785Q) /CSM/VH/VHJ7-D/VHJ785Q.Seq.d/                        100   1e-20
VHJ657 (VHJ657Q) /CSM/VH/VHJ6-C/VHJ657Q.Seq.d/                        100   1e-20
VHJ286 (VHJ286Q) /CSM/VH/VHJ2-D/VHJ286Q.Seq.d/                        100   1e-20

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ427065) Dictyostelium discoideum cDNA clone:ddv61m01, 5' ...   100   3e-17  1
(BJ426965) Dictyostelium discoideum cDNA clone:ddv60h19, 5' ...   100   3e-17  1
(BJ426838) Dictyostelium discoideum cDNA clone:ddv60m08, 5' ...   100   3e-17  1
(BJ425713) Dictyostelium discoideum cDNA clone:ddv56i18, 5' ...   100   3e-17  1
(BJ425262) Dictyostelium discoideum cDNA clone:ddv55l04, 5' ...   100   3e-17  1
(BJ424460) Dictyostelium discoideum cDNA clone:ddv52b17, 5' ...   100   3e-17  1
(BJ424136) Dictyostelium discoideum cDNA clone:ddv51b14, 5' ...   100   3e-17  1
(BJ423931) Dictyostelium discoideum cDNA clone:ddv50j21, 5' ...   100   3e-17  1
(BJ423810) Dictyostelium discoideum cDNA clone:ddv50a16, 5' ...   100   3e-17  1
(BJ423633) Dictyostelium discoideum cDNA clone:ddv49k22, 5' ...   100   3e-17  1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 67,577,392

 psg: 0.49  gvh: -0.22  alm: 0.81  top: 0.53  tms: 0.00  mit: 0.35  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 76.0 %: nuclear
	 20.0 %: cytoplasmic
	  4.0 %: mitochondrial

>> prediction for VHF217 is nuc

>VHF217F.Seq
AATTATATTATAAATTTATACTCATTTATTGGTTTGATNGNGTNCATATAAAAAGTTATT
AAATAAATAAATAATAATAATAATAATAATANCAATATTAATAATAATAATAAAATATAT
TTTAAAAAAAAAATAAAANTAAAATAAAAATNNNNNNNNNN