>VHE436 (VHE436Q) /CSM/VH/VHE4-B/VHE436Q.Seq.d/
ACCTTTATTAAAAAATCCAAATAAACATAAACATAAATATAATAAACATAAAAAATGAGT
AAAATCATTCACAATTTACAAAACATAGAGTTAGACTCATTAAAAAAACTTGGAGAAGTT
ACCAAATATTTAAATGAACATCCAATGCTTAGATCATTTTTAATTTCCACTGGTCTCATT
GTAACCTCAAAATTAATTAAATTAATCAAAAATAGAATTAGAAATAATACAATTTTAGAA
ATTGATTTTACAAATACAATTGATACATCTGATGTTGATATTAGTCCAATTGAAAAATTA
CTTGATCCAAATATTATTTCATTTAGATCACTTTTAGATGCAATTGAAAAAGCAGCAAAT
GATAAGAGGGTGATTGGTTTAATTGTTAGATTAAGTGGTGAAAATCAATTTTCATTAGCA
AATATTCAAGAATTTAGAAATGCAATTTCATTCTTTAAGAGTAAAGGTAAGAGAACCGTT
GCTTTCACTGATTCATTCTGTGAGGCTGGTAGTGGTATTGGTAGATACTATATGGCTTCA
ATTTTCCATGATGTCTATATGGCACCATCAGGTACTTTAAATTTAATTAATACTCAATAT
GATTTCGCTTTCATTAXXXXXXXXXXATAAAATCGTTGCATTGGGTGCAACACTAACTGG
TTCAATTGGTGTTTTAACTGCTAAATTCAATTTGAAAGGAATGTGGGAAGAGAAGGTTCA
TGTCAAATTTGATGCCCTCCATTTGAATCCAGATGGTGCCACTGACAATTCAACTTACTT
CTCCTCATTACACAATTACACAGAAAAGCAATTGGCCGAGGTCAATAGTTATATGGATTT
CATTTATGAAGATTTCACTAGTAAAGTTAGTAAAGGTCGTAGATTAACTCGTGATCAAGT
TGAAGAGATTGCTCGTGGTCGTGTTTGGACTGGTGCTCAAGCATTAAAACTCTCACTCGT
TGATAAATTGGGTGGCTTGAAAGAGGCAATTGAAGTTGCCAAAGAATTGGTTGGTATCGC
ATCAAATGTTCAACCACATGTTGTCACCTATCCAAAGGAAACAGTTTTATCACAATTGGT
TGCCTCTAGTGCAAACAATTCTCAAGACCTTGAAAGACGTGGCACTCCAGCTCAAGCTTC
AATCACTCATTCTGTTGGTGTTTCAACATCAATCTTTACCAAATTTTCAACACTTACAAA
ATTAATTCTTTTACCAAATAATTCAATCTCTTCAATTGCAAATACTTTAATTAATAATCA
AAAAAATAGTAATATCTTATCAATGAATCAATCTTCATTAATTTCTTCATCTTTTTAAAA
TTTTTTTAAAATAAAAATTTAAATAAAATTTAAAATAAA

tfikksk*t*t*i**t*KMSKIIHNLQNIELDSLKKLGEVTKYLNEHPMLRSFLISTGLI
VTSKLIKLIKNRIRNNTILEIDFTNTIDTSDVDISPIEKLLDPNIISFRSLLDAIEKAAN
DKRVIGLIVRLSGENQFSLANIQEFRNAISFFKSKGKRTVAFTDSFCEAGSGIGRYYMAS
IFHDVYMAPSGTLNLINTQYDFAFI---

---KIVALGATLTGSIGVLTAKFNLKGMWEEKVHVKFDALHLNPDGATDNSTYFSSLHNY
TEKQLAEVNSYMDFIYEDFTSKVSKGRRLTRDQVEEIARGRVWTGAQALKLSLVDKLGGL
KEAIEVAKELVGIASNVQPHVVTYPKETVLSQLVASSANNSQDLERRGTPAQASITHSVG
VSTSIFTKFSTLTKLILLPNNSISSIANTLINNQKNSNILSMNQSSLISSSF*nffkiki
*ikfki

Frame A:
tfikksk*t*t*i**t*KMSKIIHNLQNIELDSLKKLGEVTKYLNEHPMLRSFLISTGLI
VTSKLIKLIKNRIRNNTILEIDFTNTIDTSDVDISPIEKLLDPNIISFRSLLDAIEKAAN
DKRVIGLIVRLSGENQFSLANIQEFRNAISFFKSKGKRTVAFTDSFCEAGSGIGRYYMAS
IFHDVYMAPSGTLNLINTQYDFAFI---

---ikslhwvqh*lvqlvf*llnsi*kecgkrrfmsnlmpsi*iqmvpltiqltsphyti
tqksnwprsiviwisfmkislvklvkvvd*lviklkrllvvvfglvlkh*nshslinwva
*krqlklpknwlvshqmfnhmlspiqrkqfyhnwlplvqtilktlkdvalqlklqslill
vfqhqslpnfqhlqn*ffyqiiqslqlqil*liikkivisyq*inlh*flhlfkiflk*k
fk*nlk*

Frame B:
pllknpnkhkhkynkhkk*vksftiykt*s*th*knleklpni*mniqcldhf*fplvsl
*pqn*ln*skieleiiqf*klilqiqlihlmlilvqlknyliqilfhldhf*mqlkkqqm
irg*lv*lld*vvkinfh*qifknlemqfhslrvkvrepllslihsvrlvvvlvdtiwlq
fsmmsiwhhqvl*i*lilnmislsl---

---*nrcigcntnwfnwcfnc*iqfernvgregscqi*cppfesrwch*qfnllllitql
hrkaigrgq*lygfhl*rfh**s**rs*ins*ss*rdcswscldwcssiktltr**igwl
ergn*scqrigwyrikcsttcchlskgnsfitigcl*ckqfsrp*ktwhssssfnhsfcw
cfninlyqifntykinsftk*fnlfnckyfn**skk**ylinesifinffiflkff*nkn
lnki*nk

Frame C:
ly*kiqinininiinikne*nhsqftkhrvrlikktwrsyqifk*tsna*iifnfhwshc
nlkin*inqk*n*k*ynfrn*fykyn*yi*c*y*sn*kit*skyyfi*itfrcn*kssk*
*egdwfnc*ikw*ksifiskysri*kcnfil*e*r*enrcfh*fil*gw*wyw*ilygfn
fp*clygtiryfkfn*ysi*frfh---

---KIVALGATLTGSIGVLTAKFNLKGMWEEKVHVKFDALHLNPDGATDNSTYFSSLHNY
TEKQLAEVNSYMDFIYEDFTSKVSKGRRLTRDQVEEIARGRVWTGAQALKLSLVDKLGGL
KEAIEVAKELVGIASNVQPHVVTYPKETVLSQLVASSANNSQDLERRGTPAQASITHSVG
VSTSIFTKFSTLTKLILLPNNSISSIANTLINNQKNSNILSMNQSSLISSSF*nffkiki
*ikfki

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHE436 (VHE436Q) /CSM/VH/VHE4-B/VHE436Q.Seq.d/                       2329   0.0
VHJ536 (VHJ536Q) /CSM/VH/VHJ5-B/VHJ536Q.Seq.d/                       1316   0.0
VHO671 (VHO671Q) /CSM/VH/VHO6-C/VHO671Q.Seq.d/                       1308   0.0
VHK271 (VHK271Q) /CSM/VH/VHK2-C/VHK271Q.Seq.d/                       1308   0.0
AHJ464 (AHJ464Q) /CSM/AH/AHJ4-C/AHJ464Q.Seq.d/                       1308   0.0
AFK760 (AFK760Q) /CSM/AF/AFK7-C/AFK760Q.Seq.d/                       1306   0.0
CHO817 (CHO817Q) /CSM/CH/CHO8-A/CHO817Q.Seq.d/                       1296   0.0
AFJ890 (AFJ890Q) /CSM/AF/AFJ8-D/AFJ890Q.Seq.d/                       1285   0.0
AFK142 (AFK142Q) /CSM/AF/AFK1-B/AFK142Q.Seq.d/                       1221   0.0
SSD325 (SSD325Q) /CSM/SS/SSD3-B/SSD325Q.Seq.d/                       1217   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

EH659231|EH659231.1 USDA-FP_186163 Adult Blue-green Sharpshooter (WHGA) Graphocephala atropunctata cDNA clone WHGA043-6-T3_F01 5', mRNA sequence.    48   0.67   1
AC124773|AC124773.4 Mus musculus chromosome 3 clone RP23-49B23, complete sequence.    42   1.2    4
AL935331|AL935331.9 Mouse DNA sequence from clone RP24-264J19 on chromosome 2.    34   1.4    2
EK332724|EK332724.1 1095467030114 Global-Ocean-Sampling_GS-31-01-01-1P3-1P8KB marine metagenome genomic clone 1061005814964 3', genomic survey sequence.    34   2.4    3
AL513191|AL513191.4 Human DNA sequence from clone RP11-224F24 on chromosome 1.    40   2.6    3
AU242857|AU242857.1 Oryzias latipes cDNA clone:NGY20.01g.          46   2.7    1
AC126140|AC126140.4 Rattus norvegicus clone CH230-101N3, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    46   2.7    1
AC118515|AC118515.4 Rattus norvegicus clone CH230-233A9, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    46   2.7    1
AC096047|AC096047.6 Rattus norvegicus clone CH230-12N19, WORKING DRAFT SEQUENCE, 3 unordered pieces.    46   2.7    1
AC095310|AC095310.5 Rattus norvegicus clone CH230-15J9, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.    46   2.7    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000113_7315(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   116   2e-24
CP000449_864(CP000449|pid:none) Maricaulis maris MCS10, complete...   108   4e-22
CP000580_1064(CP000580|pid:none) Mycobacterium sp. JLS, complete...   107   1e-21
CP000384_1034(CP000384|pid:none) Mycobacterium sp. MCS, complete...   107   1e-21
AE016958_4188(AE016958|pid:none) Mycobacterium avium subsp. para...   104   8e-21
CP000480_1435(CP000480|pid:none) Mycobacterium smegmatis str. MC...   103   1e-20
CP000656_4996(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c...   102   4e-20
AL583923_183(AL583923|pid:none) Mycobacterium leprae strain TN c...   100   1e-19
CP000854_1043(CP000854|pid:none) Mycobacterium marinum M, comple...   100   2e-19
AP007255_1598(AP007255|pid:none) Magnetospirillum magneticum AMB...   100   2e-19

 psg: 0.71  gvh: 0.49  alm: 0.33  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: Golgi

>> prediction for VHE436 is cyt

>VHE436F.Seq
ACCTTTATTAAAAAATCCAAATAAACATAAACATAAATATAATAAACATAAAAAATGAGT
AAAATCATTCACAATTTACAAAACATAGAGTTAGACTCATTAAAAAAACTTGGAGAAGTT
ACCAAATATTTAAATGAACATCCAATGCTTAGATCATTTTTAATTTCCACTGGTCTCATT
GTAACCTCAAAATTAATTAAATTAATCAAAAATAGAATTAGAAATAATACAATTTTAGAA
ATTGATTTTACAAATACAATTGATACATCTGATGTTGATATTAGTCCAATTGAAAAATTA
CTTGATCCAAATATTATTTCATTTAGATCACTTTTAGATGCAATTGAAAAAGCAGCAAAT
GATAAGAGGGTGATTGGTTTAATTGTTAGATTAAGTGGTGAAAATCAATTTTCATTAGCA
AATATTCAAGAATTTAGAAATGCAATTTCATTCTTTAAGAGTAAAGGTAAGAGAACCGTT
GCTTTCACTGATTCATTCTGTGAGGCTGGTAGTGGTATTGGTAGATACTATATGGCTTCA
ATTTTCCATGATGTCTATATGGCACCATCAGGTACTTTAAATTTAATTAATACTCAATAT
GATTTCGCTTTCATTANNNNNNNNNN

>VHE436Z.Seq
NNNNNNNNNNATAAAATCGTTGCATTGGGTGCAACACTAACTGGTTCAATTGGTGTTTTA
ACTGCTAAATTCAATTTGAAAGGAATGTGGGAAGAGAAGGTTCATGTCAAATTTGATGCC
CTCCATTTGAATCCAGATGGTGCCACTGACAATTCAACTTACTTCTCCTCATTACACAAT
TACACAGAAAAGCAATTGGCCGAGGTCAATAGTTATATGGATTTCATTTATGAAGATTTC
ACTAGTAAAGTTAGTAAAGGTCGTAGATTAACTCGTGATCAAGTTGAAGAGATTGCTCGT
GGTCGTGTTTGGACTGGTGCTCAAGCATTAAAACTCTCACTCGTTGATAAATTGGGTGGC
TTGAAAGAGGCAATTGAAGTTGCCAAAGAATTGGTTGGTATCGCATCAAATGTTCAACCA
CATGTTGTCACCTATCCAAAGGAAACAGTTTTATCACAATTGGTTGCCTCTAGTGCAAAC
AATTCTCAAGACCTTGAAAGACGTGGCACTCCAGCTCAAGCTTCAATCACTCATTCTGTT
GGTGTTTCAACATCAATCTTTACCAAATTTTCAACACTTACAAAATTAATTCTTTTACCA
AATAATTCAATCTCTTCAATTGCAAATACTTTAATTAATAATCAAAAAAATAGTAATATC
TTATCAATGAATCAATCTTCATTAATTTCTTCATCTTTTTAAAATTTTTTTAAAATAAAA
ATTTAAATAAAATTTAAAATAAA

>VHE436P.Seq
ACCTTTATTAAAAAATCCAAATAAACATAAACATAAATATAATAAACATAAAAAATGAGT
AAAATCATTCACAATTTACAAAACATAGAGTTAGACTCATTAAAAAAACTTGGAGAAGTT
ACCAAATATTTAAATGAACATCCAATGCTTAGATCATTTTTAATTTCCACTGGTCTCATT
GTAACCTCAAAATTAATTAAATTAATCAAAAATAGAATTAGAAATAATACAATTTTAGAA
ATTGATTTTACAAATACAATTGATACATCTGATGTTGATATTAGTCCAATTGAAAAATTA
CTTGATCCAAATATTATTTCATTTAGATCACTTTTAGATGCAATTGAAAAAGCAGCAAAT
GATAAGAGGGTGATTGGTTTAATTGTTAGATTAAGTGGTGAAAATCAATTTTCATTAGCA
AATATTCAAGAATTTAGAAATGCAATTTCATTCTTTAAGAGTAAAGGTAAGAGAACCGTT
GCTTTCACTGATTCATTCTGTGAGGCTGGTAGTGGTATTGGTAGATACTATATGGCTTCA
ATTTTCCATGATGTCTATATGGCACCATCAGGTACTTTAAATTTAATTAATACTCAATAT
GATTTCGCTTTCATTA----------ATAAAATCGTTGCATTGGGTGCAACACTAACTGG
TTCAATTGGTGTTTTAACTGCTAAATTCAATTTGAAAGGAATGTGGGAAGAGAAGGTTCA
TGTCAAATTTGATGCCCTCCATTTGAATCCAGATGGTGCCACTGACAATTCAACTTACTT
CTCCTCATTACACAATTACACAGAAAAGCAATTGGCCGAGGTCAATAGTTATATGGATTT
CATTTATGAAGATTTCACTAGTAAAGTTAGTAAAGGTCGTAGATTAACTCGTGATCAAGT
TGAAGAGATTGCTCGTGGTCGTGTTTGGACTGGTGCTCAAGCATTAAAACTCTCACTCGT
TGATAAATTGGGTGGCTTGAAAGAGGCAATTGAAGTTGCCAAAGAATTGGTTGGTATCGC
ATCAAATGTTCAACCACATGTTGTCACCTATCCAAAGGAAACAGTTTTATCACAATTGGT
TGCCTCTAGTGCAAACAATTCTCAAGACCTTGAAAGACGTGGCACTCCAGCTCAAGCTTC
AATCACTCATTCTGTTGGTGTTTCAACATCAATCTTTACCAAATTTTCAACACTTACAAA
ATTAATTCTTTTACCAAATAATTCAATCTCTTCAATTGCAAATACTTTAATTAATAATCA
AAAAAATAGTAATATCTTATCAATGAATCAATCTTCATTAATTTCTTCATCTTTTTAAAA
TTTTTTTAAAATAAAAATTTAAATAAAATTTAAAATAAA