AFN685
Library AF
(Link to library)
Clone ID AFN685
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID AFN685P
(Link to Original site)
Representative DNA sequence
>AFN685 (AFN685Q) /CSM/AF/AFN6-D/AFN685Q.Seq.d/
TACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCA
AATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACC
TTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCAT
CAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTA
AAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTA
AATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAA
ATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTG
GTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAA
TGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGGTGGTTCACATGCAGGTAATAAA
TTAGCTATGCAAGAATTTATGATTTTACCAGTCGXXXXXXXXXXAATGTCATCAGTGGTA
GATACGGTCAAGATGCTATCAATGTTGGTGATGAAGGTGGTTTCGCTCCACCAATTCAAA
GCAACAAAGAAGGTCTTGAACTCTTAAAACTTGCCATTGAAAAAGCTGGTTACACAGGTT
TAGTTAAAATTGGTATGGATTGTGCTGCCTCTGAATTCAAAGTTGAAAATGGTTACGATC
TTGACTTCAAAACTAAAAACAATGACGGTTCAGCTGTTATCTCTGGTGAAAAATTAGGTG
ATCTCTACAGAGAATTCATTAAAGAATATCCAATCATTTCAATTGAAGATCCATTTGATC
AAGATGATTGGGAATCATACACTAAATTAACAGCATCAGTTGATATTCAAATTGTTGGTG
ATGATTTACTTGTTACCAACCCAGAAAGAATTAAGACTGGTATTGAAAAGAAAGCATGTA
ATGCTCTTTTATTAAAAGTTAACCAAATTGGTTCAGTCACTGAATCAATTCGTGCCGCTC
TTGACTCAAAGAATGCATCATGGGGTGTCATGGTTAGCCATCGTTCAGGTGAAACTGAAG
ATACCTTCATTGCTGATTTAGTTGTTGGTTTAGGTACTGGTCAAATTAAAACTGGTGCTC
CATGTAGATCAGAAAGATTAGCCAAATACAATCAACTTGTTAGAATTAACGAAGAGTTAG
GTGAAAACCATAACTATGCGGTTTAACTTTCCGTAAATTTTAATTTTACTCATAATATG
sequence update 2001. 6. 1
Translated Amino Acid sequence
yfiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfhqvh
qlvfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sismvpq
ikvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*DYQFQHSMLSMGGSHAGNK
LAMQEFMILPV---

---NVISGRYGQDAINVGDEGGFAPPIQSNKEGLELLKLAIEKAGYTGLVKIGMDCAASE
FKVENGYDLDFKTKNNDGSAVISGEKLGDLYREFIKEYPIISIEDPFDQDDWESYTKLTA
SVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKVNQIGSVTESIRAALDSKNASWGVMV
SHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERLAKYNQLVRINEELGENHNYAV*lsv
nfnfthnm


Translated Amino Acid sequence (All Frames)
Frame A:
yfiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfhqvh
qlvfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sismvpq
ikvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*DYQFQHSMLSMGGSHAGNK
LAMQEFMILPV---

---NVISGRYGQDAINVGDEGGFAPPIQSNKEGLELLKLAIEKAGYTGLVKIGMDCAASE
FKVENGYDLDFKTKNNDGSAVISGEKLGDLYREFIKEYPIISIEDPFDQDDWESYTKLTA
SVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKVNQIGSVTESIRAALDSKNASWGVMV
SHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERLAKYNQLVRINEELGENHNYAV*lsv
nfnfthnm

Frame B:
tlfffisiyiyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscssirci
nwyl*sc*ikrw**ikilr*rctqsnqkhsrshstsrhw*isfrsscyr*indrsrwypk
*r*ircqrypcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwvvhmqvin
*lcknl*fyqs---

---mssvvdtvkmlsmlvmkvvslhqfkatkkvlns*nlplkklvtqv*lklvwivlpln
sklkmvtiltsklktmtvqllslvkn*vistenslkniqsfqlkihlikmignhtln*qh
qlifkllvmiyllptqkelrlvlkrkhvmlfy*kltklvqslnqfvplltqrmhhgvswl
aivqvklkipslli*llv*vlvklklvlhvdqkd*pntinlleltks*vktitmrfnfp*
ilillii

Frame C:
lyfflslsiyisffkmsviksikareildsrgnptvevdlytekdgvvssfraavpsgas
tgiyeavelrdgdksrylgkgvlkaiknileviqpavigksvsdqaaidklmidldgtpn
kgklganailavslavcragaadrnlplykyiseiagtkmrlpvpafnvingwftcr**i
syariydfts---

---chqw*irsrcyqcw**rwfrstnskqqrrs*tlktch*kswlhrfs*nwyglccl*i
qs*kwlrs*lqn*kq*rfscylw*kir*slqrih*risnhfn*rsi*sr*lgiih*insi
s*ysncw**ftcyqprkn*dwy*kesm*csfiks*pnwfsh*inscrs*lkecimgchg*
psfr*n*rylhc*fscwfrywsn*nwcsm*irkisqiqstc*n*rrvr*kp*lcgltfrk
f*fys*y

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AFN685 (AFN685Q) /CSM/AF/AFN6-D/AFN685Q.Seq.d/ 2524 0.0
SFH339 (SFH339Q) /CSM/SF/SFH3-B/SFH339Q.Seq.d/ 1457 0.0
VFE233 (VFE233Q) /CSM/VF/VFE2-B/VFE233Q.Seq.d/ 1443 0.0
SSI448 (SSI448Q) /CSM/SS/SSI4-B/SSI448Q.Seq.d/ 1443 0.0
SFE744 (SFE744Q) /CSM/SF/SFE7-B/SFE744Q.Seq.d/ 1443 0.0
SFC169 (SFC169Q) /CSM/SF/SFC1-C/SFC169Q.Seq.d/ 1443 0.0
CHB226 (CHB226Q) /CSM/CH/CHB2-B/CHB226Q.Seq.d/ 1443 0.0
AFK881 (AFK881Q) /CSM/AF/AFK8-D/AFK881Q.Seq.d/ 1443 0.0
AFG692 (AFG692Q) /CSM/AF/AFG6-D/AFG692Q.Seq.d/ 1443 0.0
SFB846 (SFB846Q) /CSM/SF/SFB8-B/SFB846Q.Seq.d/ 1437 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

X80474|X80474.1 N.frontalis enolase gene. 64 1e-76 13
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 70 2e-68 11
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 2e-57 10
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 2e-57 10
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds. 76 2e-57 10
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds. 76 1e-55 9
BM395755|BM395755.1 5009-0-10-H08.t.1 Chilcoat/Turkewitz cDNA (large fraction) Tetrahymena thermophila cDNA, mRNA sequence. 121 1e-48 5
BM165201|BM165201.1 EST567724 PyBS Plasmodium yoelii yoelii cDNA clone PYCMI87 5' end, mRNA sequence. 92 1e-46 5
AF348930|AF348930.1 Tetrahymena bergeri enolase (eno) gene, partial cds. 66 2e-46 6
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 8e-46 10
dna update 2003. 9.11
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 742 0.0
EF137905_1(EF137905|pid:none) Helianthus annuus plastid enolase ... 529 e-149
AC016662_10(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 520 e-146
AK243111_1(AK243111|pid:none) Oryza sativa Japonica Group cDNA, ... 509 e-143
DQ497988_1(DQ497988|pid:none) Polypterus senegalus enolase B mRN... 508 e-142
EU964132_1(EU964132|pid:none) Zea mays clone 276124 enolase mRNA... 507 e-142
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 506 e-142
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 506 e-142
T12341(T12341) phosphopyruvate hydratase (EC 4.2.1.11) - common ... 504 e-141
(Q43130) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 503 e-141
protein update 2009. 4.25
PSORT

psg: 0.75 gvh: 0.51 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.19 mip: 0.07
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
28.0 %: nuclear
12.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for AFN685 is cyt

5' end seq. ID AFN685F
5' end seq.
>AFN685F.Seq
TACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCA
AATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACC
TTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCAT
CAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTA
AAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTA
AATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAA
ATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTG
GTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAA
TGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGGTGGTTCACATGCAGGTAATAAA
TTAGCTATGCAAGAATTTATGATTTTACCAGTCG----------
Length of 5' end seq. 574
3' end seq. ID AFN685Z
3' end seq.
>AFN685Z.Seq
----------AATGTCATCAGTGGTAGATACGGTCAAGATGCTATCAATGTTGGTGATGA
AGGTGGTTTCGCTCCACCAATTCAAAGCAACAAAGAAGGTCTTGAACTCTTAAAACTTGC
CATTGAAAAAGCTGGTTACACAGGTTTAGTTAAAATTGGTATGGATTGTGCTGCCTCTGA
ATTCAAAGTTGAAAATGGTTACGATCTTGACTTCAAAACTAAAAACAATGACGGTTCAGC
TGTTATCTCTGGTGAAAAATTAGGTGATCTCTACAGAGAATTCATTAAAGAATATCCAAT
CATTTCAATTGAAGATCCATTTGATCAAGATGATTGGGAATCATACACTAAATTAACAGC
ATCAGTTGATATTCAAATTGTTGGTGATGATTTACTTGTTACCAACCCAGAAAGAATTAA
GACTGGTATTGAAAAGAAAGCATGTAATGCTCTTTTATTAAAAGTTAACCAAATTGGTTC
AGTCACTGAATCAATTCGTGCCGCTCTTGACTCAAAGAATGCATCATGGGGTGTCATGGT
TAGCCATCGTTCAGGTGAAACTGAAGATACCTTCATTGCTGATTTAGTTGTTGGTTTAGG
TACTGGTCAAATTAAAACTGGTGCTCCATGTAGATCAGAAAGATTAGCCAAATACAATCA
ACTTGTTAGAATTAACGAAGAGTTAGGTGAAAACCATAACTATGCGGTTTAACTTTCCGT
AAATTTTAATTTTACTCATAATATG
Length of 3' end seq. 735
Connected seq. ID AFN685P
Connected seq.
>AFN685P.Seq
TACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCA
AATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACC
TTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCAT
CAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTA
AAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTA
AATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAA
ATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTG
GTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAA
TGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGGTGGTTCACATGCAGGTAATAAA
TTAGCTATGCAAGAATTTATGATTTTACCAGTCG----------AATGTCATCAGTGGTA
GATACGGTCAAGATGCTATCAATGTTGGTGATGAAGGTGGTTTCGCTCCACCAATTCAAA
GCAACAAAGAAGGTCTTGAACTCTTAAAACTTGCCATTGAAAAAGCTGGTTACACAGGTT
TAGTTAAAATTGGTATGGATTGTGCTGCCTCTGAATTCAAAGTTGAAAATGGTTACGATC
TTGACTTCAAAACTAAAAACAATGACGGTTCAGCTGTTATCTCTGGTGAAAAATTAGGTG
ATCTCTACAGAGAATTCATTAAAGAATATCCAATCATTTCAATTGAAGATCCATTTGATC
AAGATGATTGGGAATCATACACTAAATTAACAGCATCAGTTGATATTCAAATTGTTGGTG
ATGATTTACTTGTTACCAACCCAGAAAGAATTAAGACTGGTATTGAAAAGAAAGCATGTA
ATGCTCTTTTATTAAAAGTTAACCAAATTGGTTCAGTCACTGAATCAATTCGTGCCGCTC
TTGACTCAAAGAATGCATCATGGGGTGTCATGGTTAGCCATCGTTCAGGTGAAACTGAAG
ATACCTTCATTGCTGATTTAGTTGTTGGTTTAGGTACTGGTCAAATTAAAACTGGTGCTC
CATGTAGATCAGAAAGATTAGCCAAATACAATCAACTTGTTAGAATTAACGAAGAGTTAG
GTGAAAACCATAACTATGCGGTTTAACTTTCCGTAAATTTTAATTTTACTCATAATATG
Length of connected seq. 1309
Full length Seq ID -
Full length Seq. -
Length of full length seq. -