>VHD327 (VHD327Q) /CSM/VH/VHD3-B/VHD327Q.Seq.d/
XXXXXXXXXXATTTGCTCTTCACTTTACATGTTGGTCGATGGTGATACCACTACATTGGC
CGGTGTTTATACATGTGCTTTCTTGGGTGTAATGTCATTGTTTGCCATTGGTAATATGTT
GTTGAAATATAAACGTTCCTCACTTCGTAGAGATATTAAGTCACCATGGATTGGCGTATT
GATTGCATTGTTTTCCGTTATTCTTGGTTTAATTTCAAATATTATCAAGGATGATTCAAT
CGTTTACTACTTTGGTATTTACTTTGGTGTTACCATTTTCATTATCATGTTAATGTTTAT
TCGTGCACGTATTCTCAAGTTATTCCTTTTCTTCACTCAAATCATTCTAAGTGGTGCTGG
TCGTGATCGTGTTGCTCGTTGGATTGGTGATGTCATTAAAAAGATTAACTCTCAACCAGT
TGTCTTCTTTGCTTCAAAGGATGATCCAGCCTATTTGAATAAAGCCATCCTTTACATTCG
TGATAATGAACAAACCAATTGGGTTAGAGTCGTACATTGTTGTAATGAAGAAGAATCAAC
CGATTCTTTCTCTTCAACTATGGAATTCTTAGATAAATGTTATNCAAAGATTAGATTAGA
T

---CSSLYMLVDGDTTTLAGVYTCAFLGVMSLFAIGNMLLKYKRSSLRRDIKSPWIGVLI
ALFSVILGLISNIIKDDSIVYYFGIYFGVTIFIIMLMFIRARILKLFLFFTQIILSGAGR
DRVARWIGDVIKKINSQPVVFFASKDDPAYLNKAILYIRDNEQTNWVRVVHCCNEEESTD
SFSSTMEFLDKCYXKIRLD

Frame A:
---falhftcwsmviplhwpvfihvlswv*chclplvicc*ninvphfveilshhglay*
lhcfplflv*fqilsrmiqsfttlvftlvlpfslsc*clfvhvfssysfsslksf*vvlv
vivllvglvmslkrltlnqlssllqrmiqpi*ikpsftfvimnkpiglesyivvmkknqp
ilslqlwns*invxqrld*


Frame B:
---llftlhvgrw*yhyigrclymcflgcnvivchw*yvvei*tflts*ry*vtmdwrid
civfryswfnfkyyqg*fnrlllwyllwcyhfhyhvnvysctysqvipflhsnhskwcws
*sccsldw*ch*kd*lstscllcfkg*sslfe*shplhs***tnqlg*srtll**rrinr
fflfnygilr*mlxkd*ir


Frame C:
---CSSLYMLVDGDTTTLAGVYTCAFLGVMSLFAIGNMLLKYKRSSLRRDIKSPWIGVLI
ALFSVILGLISNIIKDDSIVYYFGIYFGVTIFIIMLMFIRARILKLFLFFTQIILSGAGR
DRVARWIGDVIKKINSQPVVFFASKDDPAYLNKAILYIRDNEQTNWVRVVHCCNEEESTD
SFSSTMEFLDKCYXKIRLD

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHD327 (VHD327Q) /CSM/VH/VHD3-B/VHD327Q.Seq.d/                       1166   0.0
VFI245 (VFI245Q) /CSM/VF/VFI2-B/VFI245Q.Seq.d/                       1166   0.0
CHI770 (CHI770Q) /CSM/CH/CHI7-C/CHI770Q.Seq.d/                       1166   0.0
CHG858 (CHG858Q) /CSM/CH/CHG8-C/CHG858Q.Seq.d/                       1164   0.0
CHR455 (CHR455Q) /CSM/CH/CHR4-C/CHR455Q.Seq.d/                       1158   0.0
VHJ872 (VHJ872Q) /CSM/VH/VHJ8-C/VHJ872Q.Seq.d/                       1154   0.0
VHI612 (VHI612Q) /CSM/VH/VHI6-A/VHI612Q.Seq.d/                       1154   0.0
VHP887 (VHP887Q) /CSM/VH/VHP8-D/VHP887Q.Seq.d/                       1150   0.0
VHJ648 (VHJ648Q) /CSM/VH/VHJ6-B/VHJ648Q.Seq.d/                       1148   0.0
VHK267 (VHK267Q) /CSM/VH/VHK2-C/VHK267Q.Seq.d/                       1140   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116925|AC116925.2 Dictyostelium discoideum chromosome 2 map 4189423-4228998 strain AX4, complete sequence.  1166   0.0    1
AM434065|AM434065.1 Vitis vinifera, whole genome shotgun sequence, contig  VV78X257760.49, clone ENTAV 115.    48   0.29   1
DU435397|DU435397.1 1098415860821 CHORI-243 Ovis aries genomic clone CH243-238A16, genomic survey sequence.    46   1.1    1
CZ866659|CZ866659.1 OC__Ba0262K19.f OC__Ba Oryza coarctata genomic clone OC__Ba0262K19 5', genomic survey sequence.    32   2.5    3
EE570484|EE570484.1 F06_F06fm3k12_pDNRf_532709 Myzus persicae, line F001, whole male aphid library Myzus persicae cDNA clone F06_F06fm3k12_pDNRf_532709, mRNA sequence.    44   4.5    1
EJ940076|EJ940076.1 1093018860041 Global-Ocean-Sampling_GS-30-02-01-1P0-1P3KB marine metagenome genomic clone 1061002932628 5', genomic survey sequence.    44   4.5    1
EJ343596|EJ343596.1 1092963533197 Global-Ocean-Sampling_GS-28-01-01-1P6-2P0KB marine metagenome genomic clone 1061002298075 5', genomic survey sequence.    44   4.5    1
AM638996|AM638996.1 Entamoeba dispar GSS, clone dispar59e10.q1k.    44   4.5    1
AM633648|AM633648.1 Entamoeba dispar GSS, clone dispar105c04.p1k.    44   4.5    1
AM638996|AM638996.1 Entamoeba dispar GSS, clone dispar59e10.q1k.    44   4.5    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116925_7(AC116925|pid:none) Dictyostelium discoideum chromosom...   391   e-108
CT025834_28(CT025834|pid:none) uncultured sulfate-reducing bacte...   119   5e-26
CP000685_2780(CP000685|pid:none) Flavobacterium johnsoniae UW101...   105   7e-22
CR522870_2116(CR522870|pid:none) Desulfotalea psychrophila LSv54...    99   9e-20
(P53099) RecName: Full=Vitamin B6 transporter TPN1; AltName: Ful...    41   0.029
AE015927_2246(AE015927|pid:none) Clostridium tetani E88, complet...    36   0.72
CP001108_1739(CP001108|pid:none) Prosthecochloris aestuarii DSM ...    36   0.72
CR380958_263(CR380958|pid:none) Candida glabrata strain CBS138 c...    35   1.6
AE014186_297(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.1
CP001056_1611(CP001056|pid:none) Clostridium botulinum B str. Ek...    34   2.7

 psg: 0.75  gvh: 0.51  alm: 0.19  top: 0.93  tms: 0.27  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 28.0 %: plasma membrane
	 12.0 %: vacuolar
	 12.0 %: mitochondrial
	  8.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for VHD327 is end

>VHD327Z.Seq
NNNNNNNNNNATTTGCTCTTCACTTTACATGTTGGTCGATGGTGATACCACTACATTGGC
CGGTGTTTATACATGTGCTTTCTTGGGTGTAATGTCATTGTTTGCCATTGGTAATATGTT
GTTGAAATATAAACGTTCCTCACTTCGTAGAGATATTAAGTCACCATGGATTGGCGTATT
GATTGCATTGTTTTCCGTTATTCTTGGTTTAATTTCAAATATTATCAAGGATGATTCAAT
CGTTTACTACTTTGGTATTTACTTTGGTGTTACCATTTTCATTATCATGTTAATGTTTAT
TCGTGCACGTATTCTCAAGTTATTCCTTTTCTTCACTCAAATCATTCTAAGTGGTGCTGG
TCGTGATCGTGTTGCTCGTTGGATTGGTGATGTCATTAAAAAGATTAACTCTCAACCAGT
TGTCTTCTTTGCTTCAAAGGATGATCCAGCCTATTTGAATAAAGCCATCCTTTACATTCG
TGATAATGAACAAACCAATTGGGTTAGAGTCGTACATTGTTGTAATGAAGAAGAATCAAC
CGATTCTTTCTCTTCAACTATGGAATTCTTAGATAAATGTTATNCAAAGATTAGATTAGA
T