>VHC835 (VHC835Q) /CSM/VH/VHC8-B/VHC835Q.Seq.d/
AACTCTCGAGTGCAAAAAAAGTAAAGTACAAAATGGTTAATTTCACAATCGATCAAATTC
GTGCCATTATGGACCGTCGTGAAAATATCANAAATATGTCTGTTATTGCTCATGTCGATC
ACGGTAAAACCACTTTATCANATNCTTTAATCCAAAGAGCTGGTATTATTGCCGATAAAG
TTTCTGGTGATATGAGATATATGTCATGTCGNGCTGATGAACAANAGCGTGGTATCACCA
TTAAATCTTCATCTGTATCACTNCACTTAGAAATGCCAAAGGAAGACAAATTACCAGCTG
GTTGNACTTCACACGAATTTTTAATCAATCTTATCGATTXXXXXXXXXX

LSSAKKVKYKMVNFTIDQIRAIMDRRENIXNMSVIAHVDHGKTTLSXXLIQRAGIIADKV
SGDMRYMSCRADEQXRGITIKSSSVSLHLEMPKEDKLPAGXTSHEFLINLID---

Frame A:
nsrvqkk*stkwlisqsikfvplwtvvkisxicllllmsitvkplyxxl*skelvllpik
flvi*dichvxlmnxsvvsplnlhlyhxt*kcqrktnyqlvxlhtnf*sils---


Frame B:
tleckkskvqng*fhnrsnschygps*kyxkyvcycscrsr*nhfixxfnpkswyycr*s
fw*yeiyvmsx**txawyhh*ificitxlrnakgrqitswlxftrifnqsyr---


Frame C:
LSSAKKVKYKMVNFTIDQIRAIMDRRENIXNMSVIAHVDHGKTTLSXXLIQRAGIIADKV
SGDMRYMSCRADEQXRGITIKSSSVSLHLEMPKEDKLPAGXTSHEFLINLID---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHC835 (VHC835Q) /CSM/VH/VHC8-B/VHC835Q.Seq.d/                        591   e-168
VHP874 (VHP874Q) /CSM/modify/h12/F/treated/VHP874Q.Seq.d/             583   e-166
VHH874 (VHH874Q) /CSM/VH/VHH8-D/VHH874Q.Seq.d/                        583   e-166
VHG874 (VHG874Q) /CSM/VH/VHG8-D/VHG874Q.Seq.d/                        583   e-166
VHP874 (VHP874Q) /CSM/modify/h12/F/treated/VHP874Q.Seq.d/             583   e-166
VHH874 (VHH874Q) /CSM/VH/VHH8-D/VHH874Q.Seq.d/                        583   e-166
VHG874 (VHG874Q) /CSM/VH/VHG8-D/VHG874Q.Seq.d/                        583   e-166
VHQ491 (VHQ491Q) /CSM/VH/VHQ4-D/VHQ491Q.Seq.d/                        583   e-166
VHQ476 (VHQ476Q) /CSM/VH/VHQ4-D/VHQ476Q.Seq.d/                        583   e-166
VHQ473 (VHQ473Q) /CSM/VH/VHQ4-D/VHQ473Q.Seq.d/                        583   e-166

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M26017|M26017.1 D.discoideum elongation factor 2 mRNA, complete cds.   581   e-162  1
EL513430|EL513430.1 CHUX465.b1_A21.ab1 CHU(XYZ) puzzle sunflower Helianthus paradoxus cDNA clone CHUX465, mRNA sequence.    72   5e-14  3
EL476245|EL476245.1 CHUL4181.b1_J14.ab1 CHU(LMS) puzzle sunflower Helianthus paradoxus cDNA clone CHUL4181, mRNA sequence.    72   5e-14  3
DY941362|DY941362.1 CHPX9185.b1_B18.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPX9185, mRNA sequence.    72   5e-14  3
DY938228|DY938228.1 CHPX5032.b1_O09.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPX5032, mRNA sequence.    72   5e-14  3
DY907212|DY907212.1 CHAX1940.b1_G05.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAX1940, mRNA sequence.    72   5e-14  3
CO080174|CO080174.1 GR__Ea43H12.r GR__Ea Gossypium raimondii cDNA clone GR__Ea43H12 3', mRNA sequence.    56   1e-12  4
EK578481|EK578481.1 1095521378025 Global-Ocean-Sampling_GS-32-01-01-1P3-1P6KB marine metagenome genomic clone 1061005950241 5', genomic survey sequence.    52   2e-12  3
DY910258|DY910258.1 CHAX5220.b1_G10.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAX5220, mRNA sequence.    64   1e-11  3
DY905253|DY905253.1 CHAX11663.b1_N11.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAX11663, mRNA sequence.    64   1e-11  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM270011_29(AM270011|pid:none) Aspergillus niger contig An02c016...   122   5e-27
(Q6FYA7) RecName: Full=Elongation factor 2;          Short=EF-2;...   117   9e-26
AY026074_1(AY026074|pid:none) Monosiga brevicollis elongation fa...   115   6e-25
AF248644_1(AF248644|pid:none) Filobasidiella neoformans var. neo...   115   6e-25
AF083031_87(AF083031|pid:none) Guillardia theta nucleomorph chro...   114   1e-24
AY144924_1(AY144924|pid:none) Saccharomyces castellii clone Cont...   114   1e-24
(Q874B9) RecName: Full=Elongation factor 2;          Short=EF-2;...   113   2e-24
DQ357217_1(DQ357217|pid:none) Leishmania braziliensis elongation...   112   3e-24
AM494972_26(AM494972|pid:none) Leishmania braziliensis chromosom...   112   3e-24
AY618550_1(AY618550|pid:none) Trypanosoma cruzi elongation facto...   112   4e-24

 psg: 0.71  gvh: 0.49  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.30  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 28.0 %: cytoplasmic
	 28.0 %: mitochondrial
	 28.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: endoplasmic reticulum

>> prediction for VHC835 is cyt

>VHC835F.Seq
AACTCTCGAGTGCAAAAAAAGTAAAGTACAAAATGGTTAATTTCACAATCGATCAAATTC
GTGCCATTATGGACCGTCGTGAAAATATCANAAATATGTCTGTTATTGCTCATGTCGATC
ACGGTAAAACCACTTTATCANATNCTTTAATCCAAAGAGCTGGTATTATTGCCGATAAAG
TTTCTGGTGATATGAGATATATGTCATGTCGNGCTGATGAACAANAGCGTGGTATCACCA
TTAAATCTTCATCTGTATCACTNCACTTAGAAATGCCAAAGGAAGACAAATTACCAGCTG
GTTGNACTTCACACGAATTTTTAATCAATCTTATCGATTNNNNNNNNNN