>AFN569 (AFN569Q) /CSM/AF/AFN5-C/AFN569Q.Seq.d/
XXXXXXXXXXGNATATCGTCNTANANGGTGGTTCANCCATGTNTNNANNTTTTGGTAAAC
GTCTTCAACGTGATNCCNNACGTTCTGTCGATTNCCGTATCGAACGNNNNAAAGAATTAG
GTGGTGGTAAAATTNNAGCTGTCCCATTGGCCGTCAACGTNANCTCTCACAATATGCAAC
G

---XIVXXGGSXMXXXFGKRLQRDXXRSVDXRIERXKELGGGKIXAVPLAVNVXSHNMQ

Frame A:
---XIVXXGGSXMXXXFGKRLQRDXXRSVDXRIERXKELGGGKIXAVPLAVNVXSHNMQ


Frame B:
---issxxvvxpcxxxlvnvfnvxpxvlsixvsnxxkn*vvvkxxlshwpstxxlticn


Frame C:
---yrxxxwfxhvxxfw*tsst*xxtfcrxpyrtxxrirww*nxscpigrqrxlsqyat

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFN569 (AFN569Q) /CSM/AF/AFN5-C/AFN569Q.Seq.d/                        210   5e-54
SFI274 (SFI274Q) /CSM/SF/SFI2-D/SFI274Q.Seq.d/                        184   3e-46
AFN526 (AFN526Q) /CSM/AF/AFN5-B/AFN526Q.Seq.d/                        165   3e-40
VSF457 (VSF457Q) /CSM/VS/VSF4-C/VSF457Q.Seq.d/                        163   1e-39
VFD509 (VFD509Q) /CSM/VF/VFD5-A/VFD509Q.Seq.d/                        163   1e-39
SFB660 (SFB660Q) /CSM/SF/SFB6-C/SFB660Q.Seq.d/                        163   1e-39
FCL-AA15 (FCL-AA15Q) /CSM/FCL/FCL-AA/FCL-AA15Q.Seq.d/                 163   1e-39
AFN649 (AFN649Q) /CSM/AF/AFN6-C/AFN649Q.Seq.d/                        163   1e-39
AFJ410 (AFJ410Q) /CSM/AF/AFJ4-A/AFJ410Q.Seq.d/                        163   1e-39
AFI845 (AFI845Q) /CSM/AF/AFI8-B/AFI845Q.Seq.d/                        163   1e-39

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

Z46418|Z46418.1 Dictyostelium discoideum mRNA for actin-like protein.   163  9e-37  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY577012_1(AY577012|pid:none) Danio rerio clone RZ152A2C04 ARP3 ...    58   9e-08
BC096845_1(BC096845|pid:none) Danio rerio ARP3 actin-related pro...    58   9e-08
AB292042_1(AB292042|pid:none) Rattus norvegicus Arp3 mRNA for ac...    57   2e-07
AB292043_1(AB292043|pid:none) Rattus norvegicus Arp3 mRNA for ac...    57   2e-07
(Q90WD0) RecName: Full=Actin-related protein 3; AltName: Full=Ac...    57   2e-07
AK300030_1(AK300030|pid:none) Homo sapiens cDNA FLJ51082 complet...    57   2e-07
(Q4V7C7) RecName: Full=Actin-related protein 3; AltName: Full=Ac...    57   2e-07
AK302152_1(AK302152|pid:none) Homo sapiens cDNA FLJ52434 complet...    57   2e-07
AY533216_1(AY533216|pid:none) Chinchilla lanigera actin-related ...    57   2e-07
BC064225_1(BC064225|pid:none) Xenopus tropicalis ARP3 actin-rela...    57   2e-07

 psg: 0.84  gvh: 0.46  alm: 0.45  top: 0.67  tms: 0.00  mit: 0.27  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 24.0 %: nuclear
	 16.0 %: cytoskeletal
	 16.0 %: mitochondrial
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for AFN569 is cyt

>AFN569Z.Seq
----------GNATATCGTCNTANANGGTGGTTCANCCATGTNTNNANNTTTTGGTAAAC
GTCTTCAACGTGATNCCNNACGTTCTGTCGATTNCCGTATCGAACGNNNNAAAGAATTAG
GTGGTGGTAAAATTNNAGCTGTCCCATTGGCCGTCAACGTNANCTCTCACAATATGCAAC
G