>VHB710 (VHB710Q) /CSM/VH/VHB7-A/VHB710Q.Seq.d/
XXXXXXXXXXCCTTTTCCCCAAATAAATATATCATCGTTTGGCATGGTAAAGTTTCAACT
GAACACCAAAGAGAATTGGCTGCTGATTTATTCACTTTCTTACCACCAGAATATGAAGCT
GGTGTTAAAGAATTTGACCAAGGAAAAGAAAGTGATAACTTTTGGAAAATTATTGGTGGT
AATTCTAATGATATTGTTATAAATACTTTTATAAATGAAAATAAAGAAGAAAAAGAAAAA
GAAGAAGAAGAAAAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAAAAGATAATAATAAAACAACAACAATAATTAAACATTTAAGACCAAAGAAAATT
AAATTATTTTTATGCACAGATAATTCTGGTATCTTTAAAGCAGATCAAATTAATCCATTC
TCTCAAGTTGATTTAAATTCTCAAGAGTGTGTATTGTTAGATGTTTACCATAAAGTT

---FSPNKYIIVWHGKVSTEHQRELAADLFTFLPPEYEAGVKEFDQGKESDNFWKIIGGN
SNDIVINTFINENKEEKEKEEEEKEEEEEEEEEEEEEEEEEKDNNKTTTIIKHLRPKKIK
LFLCTDNSGIFKADQINPFSQVDLNSQECVLLDVYHKV

Frame A:
---lfpk*iyhrlaw*sfn*tpkrigc*fihflttri*swc*ri*prkrk**llenyww*
f**ycykyfyk*k*rrkrkrrrrkrrrgrrrgrrrrrrrrrkr***nnnnn*tfktken*
iifmhr*fwyl*srsn*silss*fkfsrvcivrclp*s


Frame B:
---FSPNKYIIVWHGKVSTEHQRELAADLFTFLPPEYEAGVKEFDQGKESDNFWKIIGGN
SNDIVINTFINENKEEKEKEEEEKEEEEEEEEEEEEEEEEEKDNNKTTTIIKHLRPKKIK
LFLCTDNSGIFKADQINPFSQVDLNSQECVLLDVYHKV


Frame C:
---fpqinissfgmvkfqlntkenwlliyslsyhqnmklvlknltkekkvitfgkllvvi
lmill*ill*mkikkkkkkkkkkkkkrkkkrkkkkkkkkkkkiiikqqq*lni*dqrkln
yfyaqiilvslkqiklihslkli*ilksvyc*mftik

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHB710 (VHB710Q) /CSM/VH/VHB7-A/VHB710Q.Seq.d/                        400   e-111
SHE140 (SHE140Q) /CSM/SH/SHE1-B/SHE140Q.Seq.d/                        329   2e-89
CHE781 (CHE781Q) /CSM/CH/CHE7-D/CHE781Q.Seq.d/                        329   2e-89
AHC792 (AHC792Q) /CSM/AH/AHC7-D/AHC792Q.Seq.d/                        329   2e-89
SHL690 (SHL690Q) /CSM/SH/SHL6-D/SHL690Q.Seq.d/                        315   3e-85
VFM161 (VFM161Q) /CSM/VF/VFM1-C/VFM161Q.Seq.d/                        224   9e-58
VSK326 (VSK326Q) /CSM/VS/VSK3-B/VSK326Q.Seq.d/                         46   5e-04
VSI349 (VSI349Q) /CSM/VS/VSI3-C/VSI349Q.Seq.d/                         46   5e-04
VSE449 (VSE449Q) /CSM/VS/VSE4-C/VSE449Q.Seq.d/                         46   5e-04
VHB390 (VHB390Q) /CSM/VH/VHB3-D/VHB390Q.Seq.d/                         46   5e-04

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U95159|U95159.1 Dictyostelium discoideum gelsolin-related protein GRP125 gene, complete cds.   394   e-163  2
BH161616|BH161616.1 ENTSO89TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42   1.5    2
AB261097|AB261097.1 Entamoeba histolytica gene for EhSec1, partial cds.    42   3.0    2
DV457872|DV457872.1 CV02025B1D07.f1 CV02-normalized library Manihot esculenta cDNA clone CV02025B1D07.f1, mRNA sequence.    44   3.5    1
AC129859|AC129859.2 Rattus norvegicus clone CH230-245B7, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    44   3.5    1
AC120590|AC120590.3 Rattus norvegicus clone CH230-91D13, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces.    44   3.5    1
ER611820|ER611820.1 1093016315568 Global-Ocean-Sampling_GS-36-01-01-2P2KB marine metagenome genomic clone 1061002594795 5', genomic survey sequence.    44   3.5    1
AM438840|AM438840.1 Vitis vinifera, whole genome shotgun sequence, contig VV78X121629.4, clone ENTAV 115.    40   4.4    2
AE017263|AE017263.1 Mesoplasma florum L1 complete genome.          40   5.2    6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

T30330(T30330) gelsolin-related protein GRP125 - slime mold (Dic...   249   3e-65
AJ577853_1(AJ577853|pid:none) Nicotiana tabacum partial mRNA for...    47   2e-04
(P36418) RecName: Full=Protovillin; AltName: Full=100 kDa actin-...    47   3e-04
E84845(E84845)probable villin 2 [imported] - Arabidopsis thaliana      42   0.005
AK318626_1(AK318626|pid:none) Arabidopsis thaliana AT3G57410 mRN...    42   0.005
AF081202_1(AF081202|pid:none) Arabidopsis thaliana villin 2 (VLN...    42   0.005
(O81645) RecName: Full=Villin-3;  &AF081203_1(AF081203|pid:none)...    42   0.005
DQ453500_1(DQ453500|pid:none) Heliocidaris tuberculata advillin ...    42   0.009
DQ453501_1(DQ453501|pid:none) Heliocidaris erythrogramma advilli...    41   0.016
BC111730_1(BC111730|pid:none) Homo sapiens advillin, mRNA (cDNA ...    40   0.035

 psg: 0.75  gvh: 0.40  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.30  mip: 0.00
 nuc: 0.09  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 32.0 %: cytoplasmic
	 12.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for VHB710 is nuc

>VHB710Z.Seq
NNNNNNNNNNCCTTTTCCCCAAATAAATATATCATCGTTTGGCATGGTAAAGTTTCAACT
GAACACCAAAGAGAATTGGCTGCTGATTTATTCACTTTCTTACCACCAGAATATGAAGCT
GGTGTTAAAGAATTTGACCAAGGAAAAGAAAGTGATAACTTTTGGAAAATTATTGGTGGT
AATTCTAATGATATTGTTATAAATACTTTTATAAATGAAAATAAAGAAGAAAAAGAAAAA
GAAGAAGAAGAAAAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAAAAGATAATAATAAAACAACAACAATAATTAAACATTTAAGACCAAAGAAAATT
AAATTATTTTTATGCACAGATAATTCTGGTATCTTTAAAGCAGATCAAATTAATCCATTC
TCTCAAGTTGATTTAAATTCTCAAGAGTGTGTATTGTTAGATGTTTACCATAAAGTT