>VHB551 (VHB551Q) /CSM/VH/VHB5-C/VHB551Q.Seq.d/
AAATAAAAGAAAAAGAAAATGAGATTATTATTATTATTAATTTTAATAATAACAATTAAT
TTTAGTTATGGTGTATTAACACCTAAAAATTTAGCAGGTGAAGCAAGTGAATTTGGTTCA
TTTAATATTCCAAATCCAATGGATGTAGCACAAAGTAGTGATAGTTCATTATTTGGTATT
TCAATGACACAAAGCCAATTGAAAAATTCATTTGAATGGTCAGGAGTTGTACCAGTTGAT
TCAGAAGAAGAATTTACATTAACATTCTTTTCAAGTTTTCCATTAAGTGAATTTAAAGTT
GAAGCATCACCAAAAACTTCATTATCATCTTCCAAATCAGAATCAGAACATAAATCAAAA
TTCTATAAGGTGATTAAATCAATATATCAAACACCAACCGTTACCAATGGTTCATTTGGT
ATTGATGGTGCAACAACTCCATCATTTAGTTTAACATGGGATAAACCAGTTGTTGGAGAT
TGGAATGTTGTAATCACAGCCTCATCATCATTAAGAAAGAATGAAAAATTCCAAAAGATG
GTAGAAGATTCAACACCTCAATTGTTAATGTTGGTTCAAAATCCAAGTGATACTCATATC
TACTCTTATGTATCATCATACAATAATTTATTCACAGXXXXXXXXXXCCAATTGAGGATT
TTGAAAATTCTGTAGAGTTCCAAGATTTTAATCAAAATCGTGGTAATGATGAATTTGCTC
AAATACTTGCCAATTTCGGTAGCCAATATACCGATGGTTTTTCACTTGTTGCTCATAGTC
AAGGTGGTAACGCTGCTCTTCACCTCGTAACATTCTATTTCAGTGGACTTGATCTTTCTC
AAAAACTTGAAGGTCGTGTCATTCAATCAATGGGTACTCCATACCAAGGTACTGCTCTCG
CTGGTACTTGGGCTTCTATTGGTAGTGCTGTAGGTGTTGGTTGTTCTGCAAATGATGATC
TCACTGTTGATGGTGCCGCTTTATGGTTAAAATCAATTCCAGCAGATAAAAGAGCTTTAG
TTTATTATACAACTACTCAATATAGTACTGGTTCTTTAATTAATTATTGTAATTTGGCTT
CCAATGCAGTCTTAGAATGGCCAAATGATGGTGTTGTTGATAATGAGCATACTCCACTCG
AAGGTGGTGTATATTTAAATAACTTTAAAGACTGGTGTCACTCTGATGGTATGCACTCAC
CACAACAAACTACAAATACTGAATATAACAAAGAAATGAGTTCCAACTCTGTTTGGTAAA
CTACTTTGTATTATTTTTTTTTCTCTACAATAATNNAATAAAATCGATTTATATTAAAT

k*KKKKMRLLLLLILIITINFSYGVLTPKNLAGEASEFGSFNIPNPMDVAQSSDSSLFGI
SMTQSQLKNSFEWSGVVPVDSEEEFTLTFFSSFPLSEFKVEASPKTSLSSSKSESEHKSK
FYKVIKSIYQTPTVTNGSFGIDGATTPSFSLTWDKPVVGDWNVVITASSSLRKNEKFQKM
VEDSTPQLLMLVQNPSDTHIYSYVSSYNNLFT---

---PIEDFENSVEFQDFNQNRGNDEFAQILANFGSQYTDGFSLVAHSQGGNAALHLVTFY
FSGLDLSQKLEGRVIQSMGTPYQGTALAGTWASIGSAVGVGCSANDDLTVDGAALWLKSI
PADKRALVYYTTTQYSTGSLINYCNLASNAVLEWPNDGVVDNEHTPLEGGVYLNNFKDWC
HSDGMHSPQQTTNTEYNKEMSSNSVW*ttlyyfffstixx*nrfiln

Frame A:
k*KKKKMRLLLLLILIITINFSYGVLTPKNLAGEASEFGSFNIPNPMDVAQSSDSSLFGI
SMTQSQLKNSFEWSGVVPVDSEEEFTLTFFSSFPLSEFKVEASPKTSLSSSKSESEHKSK
FYKVIKSIYQTPTVTNGSFGIDGATTPSFSLTWDKPVVGDWNVVITASSSLRKNEKFQKM
VEDSTPQLLMLVQNPSDTHIYSYVSSYNNLFT---

---PIEDFENSVEFQDFNQNRGNDEFAQILANFGSQYTDGFSLVAHSQGGNAALHLVTFY
FSGLDLSQKLEGRVIQSMGTPYQGTALAGTWASIGSAVGVGCSANDDLTVDGAALWLKSI
PADKRALVYYTTTQYSTGSLINYCNLASNAVLEWPNDGVVDNEHTPLEGGVYLNNFKDWC
HSDGMHSPQQTTNTEYNKEMSSNSVW*ttlyyfffstixx*nrfiln

Frame B:
nkrkrk*dyyyy*f***qlilvmvy*hlki*qvkqvnlvhlifqiqwm*hkvvivhylvf
q*hkan*kihlngqelyqliqkknlh*hsfqvfh*vnlklkhhqklhyhlpnqnqninqn
sir*lnqyikhqplpmvhlvlmvqqlhhlv*hginqlleigml*sqphhh*ermknskrw
*kiqhlnc*cwfkiqvilistlmyhhtiiysq---

---qlrilkil*sskilikivvmmnllkylpisvanipmvfhlllivkvvtllfts*hsi
svdliflknlkvvsfnqwvlhtkvllslvlglllvvl*vlvvlqmmisllmvplyg*nqf
qqikel*fiiqllnivlvl*liiviwlpmqs*ngqmmvllimsilhskvvyi*itlktgv
tlmvcthhnklqilnitkk*vptlfgkllciiffslq*xnkidly*

Frame C:
ikekeneiiiiinfnnnn*f*lwcint*kfsr*sk*iwfi*ysksngcstk***fiiwyf
ndtkpiekfi*mvrscts*frrriyinilfkfsik*i*s*sitknfiiifqirirt*iki
l*gd*inisntnryqwfiwy*wcnnsii*fnmg*tscwrleccnhsliiikke*kipkdg
rrfntsivnvgsksk*ysylllciiiq*fih---

---n*gf*kfcrvprf*sksw***icsntcqfr*piyrwfftccs*srw*rcssprnilf
qwt*sfskt*rschsingysiprycsrwylgfyw*ccrcwlfck**shc*wcrfmvkins
sr*ksfsllynysi*ywffn*ll*fgfqcslrmak*wcc***aystrrwcifk*l*rlvs
l*wyaltttnyky*i*qrnefqlclvnyfvlffflynnxiksiyik

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHP574 (VHP574Q) /CSM/VH/VHP5-D/VHP574Q.Seq.d/                       1267   0.0
VHO152 (VHO152Q) /CSM/VH/VHO1-C/VHO152Q.Seq.d/                       1267   0.0
VHN665 (VHN665Q) /CSM/VH/VHN6-C/VHN665Q.Seq.d/                       1267   0.0
VHN675 (VHN675Q) /CSM/VH/VHN6-D/VHN675Q.Seq.d/                       1257   0.0
VHQ437 (VHQ437Q) /CSM/VH/VHQ4-B/VHQ437Q.Seq.d/                       1253   0.0
VHP806 (VHP806Q) /CSM/VH/VHP8-A/VHP806Q.Seq.d/                       1253   0.0
VHP701 (VHP701Q) /CSM/VH/VHP7-A/VHP701Q.Seq.d/                       1253   0.0
VHP671 (VHP671Q) /CSM/VH/VHP6-C/VHP671Q.Seq.d/                       1253   0.0
VHP580 (VHP580Q) /CSM/VH/VHP5-D/VHP580Q.Seq.d/                       1253   0.0
VHP430 (VHP430Q) /CSM/VH/VHP4-B/VHP430Q.Seq.d/                       1253   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.  1096   0.0    1
Z11691|Z11691.1 Dictyostelium discoideum mRNA for Conditioned medium factor.   567   0.0    6
BX842599|BX842599.1 Neurospora crassa DNA linkage group II BAC clone B10A24.    48   0.63   1
EJ792093|EJ792093.1 1093017382067 Global-Ocean-Sampling_GS-30-02-01-1P0-1P3KB marine metagenome genomic clone 1061002737898 5', genomic survey sequence.    42   0.78   2
EJ863502|EJ863502.1 1093018230555 Global-Ocean-Sampling_GS-30-02-01-1P0-1P3KB marine metagenome genomic clone 1061002737898 3', genomic survey sequence.    42   0.90   2
AC087272|AC087272.5 Homo sapiens chromosome 8, clone RP11-139G7, complete sequence.    46   1.4    6
DY299389|DY299389.1 IC0AAA98BA06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.    46   2.5    1
DW054739|DW054739.1 CLLX7293.b1_J24.ab1 CLL(XYZ) lettuce saligna Lactuca saligna cDNA clone CLLX7293, mRNA sequence.    46   2.5    1
DW048907|DW048907.1 CLLX1655.b1_N05.ab1 CLL(XYZ) lettuce saligna Lactuca saligna cDNA clone CLLX1655, mRNA sequence.    46   2.5    1
DV208674|DV208674.1 0089P0115Z_D09_T7 Mimulus guttatus library 2 Mimulus guttatus cDNA clone 0089P0115Z_D09 3', mRNA sequence.    46   2.5    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM920689_339(AM920689|pid:none) Xanthomonas campestris pv. campe...   188   3e-46
CP000050_316(CP000050|pid:none) Xanthomonas campestris pv. campe...   186   1e-45
AE008922_313(AE008922|pid:none) Xanthomonas campestris pv. campe...   186   1e-45
AM039952_339(AM039952|pid:none) Xanthomonas campestris pv. vesic...   186   2e-45
AB302139_1(AB302139|pid:none) Uncultured bacterium plaM8 gene fo...    38   0.92
AB302138_1(AB302138|pid:none) Uncultured bacterium plaM7 gene fo...    38   0.92
CP001034_767(CP001034|pid:none) Natranaerobius thermophilus JW/N...    37   2.1
AF440781_31(AF440781|pid:none) Streptomyces cinnamonensis polyet...    35   6.0
AM270302_47(AM270302|pid:none) Aspergillus niger contig An13c008...    35   6.0
CP000447_3167(CP000447|pid:none) Shewanella frigidimarina NCIMB ...    35   6.0

 psg: 1.00  gvh: 0.65  alm: 0.40  top: 0.07  tms: 0.00  mit: 0.33  mip: 0.02
 nuc: 0.04  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: extracellular, including cell wall
	 24.0 %: cytoplasmic
	 12.0 %: endoplasmic reticulum
	  8.0 %: vacuolar
	  8.0 %: nuclear
	  4.0 %: vesicles of secretory system

>> prediction for VHB551 is exc

>VHB551F.Seq
AAATAAAAGAAAAAGAAAATGAGATTATTATTATTATTAATTTTAATAATAACAATTAAT
TTTAGTTATGGTGTATTAACACCTAAAAATTTAGCAGGTGAAGCAAGTGAATTTGGTTCA
TTTAATATTCCAAATCCAATGGATGTAGCACAAAGTAGTGATAGTTCATTATTTGGTATT
TCAATGACACAAAGCCAATTGAAAAATTCATTTGAATGGTCAGGAGTTGTACCAGTTGAT
TCAGAAGAAGAATTTACATTAACATTCTTTTCAAGTTTTCCATTAAGTGAATTTAAAGTT
GAAGCATCACCAAAAACTTCATTATCATCTTCCAAATCAGAATCAGAACATAAATCAAAA
TTCTATAAGGTGATTAAATCAATATATCAAACACCAACCGTTACCAATGGTTCATTTGGT
ATTGATGGTGCAACAACTCCATCATTTAGTTTAACATGGGATAAACCAGTTGTTGGAGAT
TGGAATGTTGTAATCACAGCCTCATCATCATTAAGAAAGAATGAAAAATTCCAAAAGATG
GTAGAAGATTCAACACCTCAATTGTTAATGTTGGTTCAAAATCCAAGTGATACTCATATC
TACTCTTATGTATCATCATACAATAATTTATTCACAGNNNNNNNNNN

>VHB551Z.Seq
NNNNNNNNNNCCAATTGAGGATTTTGAAAATTCTGTAGAGTTCCAAGATTTTAATCAAAA
TCGTGGTAATGATGAATTTGCTCAAATACTTGCCAATTTCGGTAGCCAATATACCGATGG
TTTTTCACTTGTTGCTCATAGTCAAGGTGGTAACGCTGCTCTTCACCTCGTAACATTCTA
TTTCAGTGGACTTGATCTTTCTCAAAAACTTGAAGGTCGTGTCATTCAATCAATGGGTAC
TCCATACCAAGGTACTGCTCTCGCTGGTACTTGGGCTTCTATTGGTAGTGCTGTAGGTGT
TGGTTGTTCTGCAAATGATGATCTCACTGTTGATGGTGCCGCTTTATGGTTAAAATCAAT
TCCAGCAGATAAAAGAGCTTTAGTTTATTATACAACTACTCAATATAGTACTGGTTCTTT
AATTAATTATTGTAATTTGGCTTCCAATGCAGTCTTAGAATGGCCAAATGATGGTGTTGT
TGATAATGAGCATACTCCACTCGAAGGTGGTGTATATTTAAATAACTTTAAAGACTGGTG
TCACTCTGATGGTATGCACTCACCACAACAAACTACAAATACTGAATATAACAAAGAAAT
GAGTTCCAACTCTGTTTGGTAAACTACTTTGTATTATTTTTTTTTCTCTACAATAATNNA
ATAAAATCGATTTATATTAAAT

>VHB551P.Seq
AAATAAAAGAAAAAGAAAATGAGATTATTATTATTATTAATTTTAATAATAACAATTAAT
TTTAGTTATGGTGTATTAACACCTAAAAATTTAGCAGGTGAAGCAAGTGAATTTGGTTCA
TTTAATATTCCAAATCCAATGGATGTAGCACAAAGTAGTGATAGTTCATTATTTGGTATT
TCAATGACACAAAGCCAATTGAAAAATTCATTTGAATGGTCAGGAGTTGTACCAGTTGAT
TCAGAAGAAGAATTTACATTAACATTCTTTTCAAGTTTTCCATTAAGTGAATTTAAAGTT
GAAGCATCACCAAAAACTTCATTATCATCTTCCAAATCAGAATCAGAACATAAATCAAAA
TTCTATAAGGTGATTAAATCAATATATCAAACACCAACCGTTACCAATGGTTCATTTGGT
ATTGATGGTGCAACAACTCCATCATTTAGTTTAACATGGGATAAACCAGTTGTTGGAGAT
TGGAATGTTGTAATCACAGCCTCATCATCATTAAGAAAGAATGAAAAATTCCAAAAGATG
GTAGAAGATTCAACACCTCAATTGTTAATGTTGGTTCAAAATCCAAGTGATACTCATATC
TACTCTTATGTATCATCATACAATAATTTATTCACAG----------CCAATTGAGGATT
TTGAAAATTCTGTAGAGTTCCAAGATTTTAATCAAAATCGTGGTAATGATGAATTTGCTC
AAATACTTGCCAATTTCGGTAGCCAATATACCGATGGTTTTTCACTTGTTGCTCATAGTC
AAGGTGGTAACGCTGCTCTTCACCTCGTAACATTCTATTTCAGTGGACTTGATCTTTCTC
AAAAACTTGAAGGTCGTGTCATTCAATCAATGGGTACTCCATACCAAGGTACTGCTCTCG
CTGGTACTTGGGCTTCTATTGGTAGTGCTGTAGGTGTTGGTTGTTCTGCAAATGATGATC
TCACTGTTGATGGTGCCGCTTTATGGTTAAAATCAATTCCAGCAGATAAAAGAGCTTTAG
TTTATTATACAACTACTCAATATAGTACTGGTTCTTTAATTAATTATTGTAATTTGGCTT
CCAATGCAGTCTTAGAATGGCCAAATGATGGTGTTGTTGATAATGAGCATACTCCACTCG
AAGGTGGTGTATATTTAAATAACTTTAAAGACTGGTGTCACTCTGATGGTATGCACTCAC
CACAACAAACTACAAATACTGAATATAACAAAGAAATGAGTTCCAACTCTGTTTGGTAAA
CTACTTTGTATTATTTTTTTTTCTCTACAATAATNNAATAAAATCGATTTATATTAAAT