>VHB439 (VHB439Q) /CSM/VH/VHB4-B/VHB439Q.Seq.d/
XXXXXXXXXXAATGCTTACTNTTGTTGTATTTCAACTNTAATGCCCTATAAATCATTACC
ATTACCAAAGTATCGTCCCNATTTATATCGCTGGTGATAGTCATTGTTTTTCAACCGCTT
GGACTCCTCTCACAATTCAAGGTGAACAACGTCTTTTCCATCCTNTATTGGTAACTGGTC
TAAAGATGTGGCATNTTCGTCCCTCAAGTAAATTCTATCCAAAAGTAAACTTTTATAACG
TCGTTCCAACCGNTCCACCAGGCTCTGAAATAGTTTTCCAATTTGGTGAAATCGATTGTC
GTGAAGGTATCATCATCTCTGTTGAACGTTGTCGTTATAAAGATGTTGAAGATGGTATGA
ATGTTACAATCGATTATTATATNTCTGCTNTAAAAGATTTGGTAGATAAGTATAAATATA
AAATTTTCATTCATCCAGTTGTACCTGTCCTTAATGAAACTCGTCATATAGTTAAAGAAT
TTAATAAAATTTTTGAAAAGAAAATTAAAGCTTGNAAAGAATTTGTTTGGTTANANTTTT
TCCCAACTCTNTTAAATCCTCAGGATGAAAATTCTTTTAATACTCAATACGCCTTAGATG
GCACTCATATGAATCCTTCTTATGTTCCANTAATTGAATCTTGTATAAACAATCAT

---mltxvvfql*CPINHYHYQSIVPIYIAGDSHCFSTAWTPLTIQGEQRLFHPXLVTGL
KMWHXRPSSKFYPKVNFYNVVPTXPPGSEIVFQFGEIDCREGIIISVERCRYKDVEDGMN
VTIDYYXSAXKDLVDKYKYKIFIHPVVPVLNETRHIVKEFNKIFEKKIKAXKEFVWLXFF
PTLLNPQDENSFNTQYALDGTHMNPSYVPXIESCINNH

Frame A:
---mltxvvfql*CPINHYHYQSIVPIYIAGDSHCFSTAWTPLTIQGEQRLFHPXLVTGL
KMWHXRPSSKFYPKVNFYNVVPTXPPGSEIVFQFGEIDCREGIIISVERCRYKDVEDGMN
VTIDYYXSAXKDLVDKYKYKIFIHPVVPVLNETRHIVKEFNKIFEKKIKAXKEFVWLXFF
PTLLNPQDENSFNTQYALDGTHMNPSYVPXIESCINNH


Frame B:
---cllllyfnxnal*iititkvssxfislvivivfqplgllsqfkvnnvfsilyw*lv*
rcgxfvpqvnsiqk*tfitsfqpxhqalk*fsnlvksivvkvsssllnvvvikmlkmv*m
lqsiiixll*kiw*isinikfsfiqlylslmklvi*lknlikflkrklklxknlfgxxfs
qlx*ilrmkillilntp*mali*illmfx*lnlv*ti


Frame C:
---ayxccistxmpykslplpkyrpxlyrw**slffnrldsshnsr*ttsfpsxignwsk
dvaxsslk*ilskskll*rrsnrstrl*nsfpiw*nrls*ryhhlc*tlsl*rc*rwyec
ynrllyxcxkrfgr*v*i*nfhsssctcp**nssys*ri**nf*ken*slxriclvxxfp
nsxkssg*kff*ysirlrwhsyesflcsxn*ilykqs

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHB439 (VHB439Q) /CSM/VH/VHB4-B/VHB439Q.Seq.d/                       1203   0.0
VHE442 (VHE442Q) /CSM/VH/VHE4-B/VHE442Q.Seq.d/                       1179   0.0
SFF890 (SFF890Q) /CSM/SF/SFF8-D/SFF890Q.Seq.d/                       1179   0.0
CHR725 (CHR725Q) /CSM/CH/CHR7-B/CHR725Q.Seq.d/                       1179   0.0
CHG287 (CHG287Q) /CSM/CH/CHG2-D/CHG287Q.Seq.d/                       1179   0.0
VHA884 (VHA884Q) /CSM/VH/VHA8-D/VHA884Q.Seq.d/                       1172   0.0
VHI262 (VHI262Q) /CSM/VH/VHI2-C/VHI262Q.Seq.d/                       1156   0.0
AHO782 (AHO782Q) /CSM/AH/AHO7-D/AHO782Q.Seq.d/                       1156   0.0
CHN540 (CHN540Q) /CSM/CH/CHN5-B/CHN540Q.Seq.d/                       1152   0.0
SHF650 (SHF650Q) /CSM/SH/SHF6-C/SHF650Q.Seq.d/                       1142   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC090407|AC090407.2 Homo sapiens chromosome 18 clone RP11-849J9 map 18, WORKING DRAFT SEQUENCE, 3 unordered pieces.    50   0.078  1
AP001364|AP001364.3 Homo sapiens genomic DNA, chromosome 18q12 clone:RP11-867A6, WORKING DRAFT SEQUENCE, 9 unordered pieces.    50   0.078  1
AP001165|AP001165.2 Homo sapiens genomic DNA, chromosome 18q12 clone:RP11-849J9, WORKING DRAFT SEQUENCE, 31 unordered pieces.    50   0.078  1
AC015967|AC015967.8 Homo sapiens chromosome 18, clone RP11-294N21, complete sequence.    50   0.078  1
AC102275|AC102275.2 Mus musculus clone RP24-290E7, WORKING DRAFT SEQUENCE, 40 unordered pieces.    42   0.13   2
AL831776|AL831776.3 Mouse DNA sequence from clone RP23-307M2 on chromosome 4.    42   0.15   2
EJ104618|EJ104618.1 1092343132295 Global-Ocean-Sampling_GS-27-01-01-1P8-2P0KB marine metagenome genomic clone 1061001386480 3', genomic survey sequence.    46   0.20   2
EJ262707|EJ262707.1 1095349052003 Global-Ocean-Sampling_GS-27-01-01-1P8-2P0KB marine metagenome genomic clone 1061005431604 5', genomic survey sequence.    48   0.31   1
EI375940|EI375940.1 POTC028TF Solanum tuberosum RHPOKEY BAC ends Solanum tuberosum genomic clone RHPOKEY019_E07, genomic survey sequence.    48   0.31   1
AC151801|AC151801.1 Solanum demissum chromosome 11 clone PGEC591C22, complete sequence.    48   0.31   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001141_348(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1...    80   7e-14
CP000282_2197(CP000282|pid:none) Saccharophagus degradans 2-40, ...    59   2e-07
(Q042F4) RecName: Full=Enolase 2;          EC=4.2.1.11; AltName:...    33   5.6

 psg: 0.90  gvh: 0.50  alm: 0.46  top: 0.40  tms: 0.00  mit: 0.23  mip: 0.10
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: vesicles of secretory system
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for VHB439 is cyt

>VHB439Z.Seq
NNNNNNNNNNAATGCTTACTNTTGTTGTATTTCAACTNTAATGCCCTATAAATCATTACC
ATTACCAAAGTATCGTCCCNATTTATATCGCTGGTGATAGTCATTGTTTTTCAACCGCTT
GGACTCCTCTCACAATTCAAGGTGAACAACGTCTTTTCCATCCTNTATTGGTAACTGGTC
TAAAGATGTGGCATNTTCGTCCCTCAAGTAAATTCTATCCAAAAGTAAACTTTTATAACG
TCGTTCCAACCGNTCCACCAGGCTCTGAAATAGTTTTCCAATTTGGTGAAATCGATTGTC
GTGAAGGTATCATCATCTCTGTTGAACGTTGTCGTTATAAAGATGTTGAAGATGGTATGA
ATGTTACAATCGATTATTATATNTCTGCTNTAAAAGATTTGGTAGATAAGTATAAATATA
AAATTTTCATTCATCCAGTTGTACCTGTCCTTAATGAAACTCGTCATATAGTTAAAGAAT
TTAATAAAATTTTTGAAAAGAAAATTAAAGCTTGNAAAGAATTTGTTTGGTTANANTTTT
TCCCAACTCTNTTAAATCCTCAGGATGAAAATTCTTTTAATACTCAATACGCCTTAGATG
GCACTCATATGAATCCTTCTTATGTTCCANTAATTGAATCTTGTATAAACAATCAT