>VHB211 (VHB211Q) /CSM/VH/VHB2-A/VHB211Q.Seq.d/
XXXXXXXXXXATTAATGAANTGACGAATNTTGATGTNTCTANAAATGTTGATATTGCCAA
TANAATCAATATTCCNCCATCAAAANAGGGTTTCTTAAATCCATTGAAAGCATTGCAAAT
GTTTGATGAACAATTACCACACANAACCATTATGGTGGNTGATGGTGGTGATTTCGTTGG
TTCTGCAAGTTATATCGTTCGTCCAAGAGCACCATTGTCTTGGTNGGATCCTGGTGTATT
TGGTACATTGGGTGTTGGTGCTGGTTTTTCNANNGCTGCCAAACTTTGTAGNCNTGATCA
TCNAGTTNGGNCAATNTATGGTGATGGTGCTTTCGGTTATAGTATACCAGAGTTGGANAC
AATGGTACGTCATAAAATTTCAGCTGGTGCTATCACTGGTAATGATTCAGGTTGGATTCA
AATCNTACGTGAACANCAAGAACAATTAAATAGTGATGTTGGTNGTAATTTAGCTTATGG
TGATTATCATCAAGNTNCAATAGCATTTGGTGGTAAAGGTTNTAAATCAACAAATGAA

---NEXTNXDVSXNVDIANXINIPPSKXGFLNPLKALQMFDEQLPHXTIMVXDGGDFVGS
ASYIVRPRAPLSWXDPGVFGTLGVGAGFSXAAKLCXXDHXVXXXYGDGAFGYSIPELXTM
VRHKISAGAITGNDSGWIQIXREXQEQLNSDVGXNLAYGDYHQXXIAFGGKGXKSTNE

Frame A:
---lmx*rxlmxlxmlilpixsifxhqxrvs*ih*khckclmnnyhtxplwwxmvvislv
lqvisfvqehhclgxilvylvhwvlvlvfxxlpnfvxxiixxgqxmvmvlsvivyqswxq
wyvikfqlvlslvmiqvgfksyvnxknn*ivmlvvi*lmviiikxq*hlvvkvxnqqm


Frame B:
---**xdex*cxxkc*ycqxnqysxikxgflksiesianv**tittxnhygg*ww*frwf
cklyrsskstivlvgswciwyigcwcwffxxcqtl*x*sssxxnxw*wcfrl*ytrvgxn
gts*nfswcyhw**frldsnxt*txrtik**cwx*fslw*lssxxnsiww*rx*ink*


Frame C:
---NEXTNXDVSXNVDIANXINIPPSKXGFLNPLKALQMFDEQLPHXTIMVXDGGDFVGS
ASYIVRPRAPLSWXDPGVFGTLGVGAGFSXAAKLCXXDHXVXXXYGDGAFGYSIPELXTM
VRHKISAGAITGNDSGWIQIXREXQEQLNSDVGXNLAYGDYHQXXIAFGGKGXKSTNE

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHB211 (VHB211Q) /CSM/VH/VHB2-A/VHB211Q.Seq.d/                        892   0.0
VHG620 (VHG620Q) /CSM/VH/VHG6-A/VHG620Q.Seq.d/                        844   0.0
VHC622 (VHC622Q) /CSM/VH/VHC6-A/VHC622Q.Seq.d/                        844   0.0
VHC522 (VHC522Q) /CSM/VH/VHC5-A/VHC522Q.Seq.d/                        844   0.0
VFN817 (VFN817Q) /CSM/VF/VFN8-A/VFN817Q.Seq.d/                        844   0.0
VFL161 (VFL161Q) /CSM/VF/VFL1-C/VFL161Q.Seq.d/                        844   0.0
VFB703 (VFB703Q) /CSM/VF/VFB7-A/VFB703Q.Seq.d/                        844   0.0
SFI802 (SFI802Q) /CSM/SF/SFI8-A/SFI802Q.Seq.d/                        844   0.0
VHI317 (VHI317Q) /CSM/VH/VHI3-A/VHI317Q.Seq.d/                        837   0.0
VFD251 (VFD251Q) /CSM/VF/VFD2-C/VFD251Q.Seq.d/                        817   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

DY528849|DY528849.1 BAAC-PNP1307J13.g2 C.remanei EST SB146 Caenorhabditis remanei cDNA[Caenorhabditis elegans], mRNA sequence.    52   0.016  1
EJ336244|EJ336244.1 1092963480830 Global-Ocean-Sampling_GS-28-01-01-1P6-2P0KB marine metagenome genomic clone 1061002305950 3', genomic survey sequence.    46   0.99   1
CT573104|CT573104.3 Zebrafish DNA sequence *** SEQUENCING CANCELLED *** from clone  CH211-51J14.    44   3.9    1
EJ967854|EJ967854.1 1093022056861 Global-Ocean-Sampling_GS-30-02-01-1P0-1P3KB marine metagenome genomic clone 1061002981140 3', genomic survey sequence.    44   3.9    1
EJ942331|EJ942331.1 1093018894744 Global-Ocean-Sampling_GS-30-02-01-1P0-1P3KB marine metagenome genomic clone 1061002981140 5', genomic survey sequence.    44   3.9    1
BX649403|BX649403.4 Zebrafish DNA sequence from clone CH211-153M11 in linkage group 13.    44   3.9    1
AL356275|AL356275.20 Human DNA sequence from clone RP11-328D5 on chromosome 1.    44   3.9    1
AL035091|AL035091.2 Human DNA sequence from clone XX-D88L2 on chromosome 1q32.2-32.3.    44   3.9    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011761_1(BC011761|pid:none) Homo sapiens ilvB (bacterial aceto...   170   2e-41
(A1L0T0) RecName: Full=Acetolactate synthase-like protein;      ...   170   2e-41
U61263_1(U61263|pid:none) Human acetolactate synthase homolog mR...   170   2e-41
AC004794_3(AC004794|pid:none) Homo sapiens chromosome 19, cosmid...   170   2e-41
BC149989_1(BC149989|pid:none) Bos taurus ilvB (bacterial acetola...   169   4e-41
BT020804_1(BT020804|pid:none) Bos taurus ilvB (bacterial acetola...   169   4e-41
(A6QQT9) RecName: Full=Acetolactate synthase-like protein;      ...   169   4e-41
BC151580_1(BC151580|pid:none) Bos taurus ilvB (bacterial acetola...   169   4e-41
(Q8BU33) RecName: Full=Acetolactate synthase-like protein;      ...   166   4e-40
CP000686_920(CP000686|pid:none) Roseiflexus sp. RS-1, complete g...   164   2e-39

 psg: 0.75  gvh: 0.33  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 36.0 %: nuclear
	 24.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for VHB211 is cyt

>VHB211Z.Seq
NNNNNNNNNNATTAATGAANTGACGAATNTTGATGTNTCTANAAATGTTGATATTGCCAA
TANAATCAATATTCCNCCATCAAAANAGGGTTTCTTAAATCCATTGAAAGCATTGCAAAT
GTTTGATGAACAATTACCACACANAACCATTATGGTGGNTGATGGTGGTGATTTCGTTGG
TTCTGCAAGTTATATCGTTCGTCCAAGAGCACCATTGTCTTGGTNGGATCCTGGTGTATT
TGGTACATTGGGTGTTGGTGCTGGTTTTTCNANNGCTGCCAAACTTTGTAGNCNTGATCA
TCNAGTTNGGNCAATNTATGGTGATGGTGCTTTCGGTTATAGTATACCAGAGTTGGANAC
AATGGTACGTCATAAAATTTCAGCTGGTGCTATCACTGGTAATGATTCAGGTTGGATTCA
AATCNTACGTGAACANCAAGAACAATTAAATAGTGATGTTGGTNGTAATTTAGCTTATGG
TGATTATCATCAAGNTNCAATAGCATTTGGTGGTAAAGGTTNTAAATCAACAAATGAA