>VHA289 (VHA289Q) /CSM/VH/VHA2-D/VHA289Q.Seq.d/
ATGGTTAATTTCACAATCGATCAAATTCGTGCCATTATGGACCGNCGTGAAAATATCAGA
AATATGTCTGTTATTGCTCATGTCGATCACGGTAAAACCACTTTATCAGATTCTTTAATC
CAAAGAGCTGGTATTATTGCCGATAAAGTTTCTGGNGATATGAGATATATGTCATGTCGT
GCTGATGAACAAGXXXXXXXXXX

MVNFTIDQIRAIMDRRENIRNMSVIAHVDHGKTTLSDSLIQRAGIIADKVSGDMRYMSCR
ADEQ---

Frame A:
MVNFTIDQIRAIMDRRENIRNMSVIAHVDHGKTTLSDSLIQRAGIIADKVSGDMRYMSCR
ADEQ---


Frame B:
wlisqsikfvplwtxvkiseicllllmsitvkplyqil*skelvllpikflxi*dichvv
lmn---


Frame C:
g*fhnrsnschygpx*kyqkyvcycscrsr*nhfirffnpkswyycr*sfwxyeiyvmsc
**t---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHP874 (VHP874Q) /CSM/modify/h12/F/treated/VHP874Q.Seq.d/             371   e-102
VHH874 (VHH874Q) /CSM/VH/VHH8-D/VHH874Q.Seq.d/                        371   e-102
VHG874 (VHG874Q) /CSM/VH/VHG8-D/VHG874Q.Seq.d/                        371   e-102
VHP874 (VHP874Q) /CSM/modify/h12/F/treated/VHP874Q.Seq.d/             371   e-102
VHH874 (VHH874Q) /CSM/VH/VHH8-D/VHH874Q.Seq.d/                        371   e-102
VHG874 (VHG874Q) /CSM/VH/VHG8-D/VHG874Q.Seq.d/                        371   e-102
VHQ491 (VHQ491Q) /CSM/VH/VHQ4-D/VHQ491Q.Seq.d/                        371   e-102
VHQ476 (VHQ476Q) /CSM/VH/VHQ4-D/VHQ476Q.Seq.d/                        371   e-102
VHQ473 (VHQ473Q) /CSM/VH/VHQ4-D/VHQ473Q.Seq.d/                        371   e-102
VHQ469 (VHQ469Q) /CSM/VH/VHQ4-C/VHQ469Q.Seq.d/                        371   e-102

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M26017|M26017.1 D.discoideum elongation factor 2 mRNA, complete cds.   369   2e-98  1
EL513430|EL513430.1 CHUX465.b1_A21.ab1 CHU(XYZ) puzzle sunflower Helianthus paradoxus cDNA clone CHUX465, mRNA sequence.    72   2e-12  3
EL476245|EL476245.1 CHUL4181.b1_J14.ab1 CHU(LMS) puzzle sunflower Helianthus paradoxus cDNA clone CHUL4181, mRNA sequence.    72   2e-12  3
DY941362|DY941362.1 CHPX9185.b1_B18.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPX9185, mRNA sequence.    72   2e-12  3
DY938228|DY938228.1 CHPX5032.b1_O09.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPX5032, mRNA sequence.    72   2e-12  3
DY907212|DY907212.1 CHAX1940.b1_G05.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAX1940, mRNA sequence.    72   2e-12  3
AZ931993|AZ931993.1 474.dhz93a01.s1 Saccharomyces unisporus NRRL Y-1556 Saccharomyces unisporus genomic clone 474.dhz93a01.s1, DNA sequence.    82   6e-12  1
Y09664|Y09664.1 C.albicans EFT2 gene.                              78   1e-10  1
AF107286|AF107286.1 Candida albicans elongation factor 2 (EFT2) gene, partial cds.    78   1e-10  1
DY910258|DY910258.1 CHAX5220.b1_G10.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAX5220, mRNA sequence.    64   3e-10  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM270011_29(AM270011|pid:none) Aspergillus niger contig An02c016...    95   9e-19
AY391422_1(AY391422|pid:none) Danio rerio eukaryotic translation...    94   1e-18
BT045031_1(BT045031|pid:none) Salmo salar clone ssal-rgf-510-120...    94   1e-18
BT059038_1(BT059038|pid:none) Salmo salar clone ssal-rgf-521-328...    94   1e-18
A40411(A40411) translation elongation factor eEF-2 - Caenorhabdi...    94   1e-18
AY026074_1(AY026074|pid:none) Monosiga brevicollis elongation fa...    93   2e-18
BC089730_1(BC089730|pid:none) Xenopus tropicalis MGC108369 prote...    93   2e-18
CR859604_1(CR859604|pid:none) Pongo abelii mRNA; cDNA DKFZp468K0...    93   3e-18
AK298498_1(AK298498|pid:none) Homo sapiens cDNA FLJ56548 complet...    93   3e-18
AK032997_1(AK032997|pid:none) Mus musculus 12 days embryo male w...    93   3e-18

 psg: 0.35  gvh: 0.38  alm: 0.54  top: 0.53  tms: 0.00  mit: 0.28  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 32.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for VHA289 is nuc

>VHA289F.Seq
ATGGTTAATTTCACAATCGATCAAATTCGTGCCATTATGGACCGNCGTGAAAATATCAGA
AATATGTCTGTTATTGCTCATGTCGATCACGGTAAAACCACTTTATCAGATTCTTTAATC
CAAAGAGCTGGTATTATTGCCGATAAAGTTTCTGGNGATATGAGATATATGTCATGTCGT
GCTGATGAACAAGNNNNNNNNNN