VFL760
Library VF
(Link to library)
Clone ID VFL760
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16460-1
Original site URL
Representative seq. ID VFL760P
(Link to Original site)
Representative DNA sequence
>VFL760 (VFL760Q) /CSM/VF/VFL7-C/VFL760Q.Seq.d/
ACTGTTGGCCTACTGGNATTTATTATTATTTTTTATTTTTTGTATATTAGCCAAATCATA
TAAAATTATATTTTTTAATTTTATTTGTAAATAATTAATTTGTATTTTTAAAAAAAAAAA
GGANGTCNGAAGCAACTATNGTTGAATTATTAAAAAGATTAGATCAAGCANCTACTCGTT
TAGAAGCAGTNGAAAAATCAATXXXXXXXXXXCCAGCACCAGCTTCATCAGCACCAGCCG
CCCCAGTTGCACCAGCTGTTTCATCCACTCCAGTTGAATCAAAGAAAGGTCCAGGTTTAG
GTGCAGTTTTCGGTGAACTTAGCAAAGGTGATGGTGTTACCAGTGGTTTAAAAAAAGTTA
CCAACGATATGAAATCCAAAAATTTCACCGACAAATCATCAGTTGTTAAAGCTGCTGATA
CTAAAGTCGCCAAAGTTGATGCTCCATCTAGACCAGCCGTTTTTGCTCTCCAAGGTAACA
AATGGTCCATTGAATATCAAGTTAACAACAAAGAAATTGTCATTGCCGAGCCAGATAGTC
GTCAAACTGTTTACATTTTCCAATGTGTAAACTCTTTAGTTCAAATCAAAGGTAAAGTTA
ATGCAATTACTCTTGATGGTTGTAAAAAGACTTCAATCGTTTTCGAAAATGCCATTTCCT
CTTGTGAAGTTGTCAATTGTAATGGTGTTGAAATCCAAGTCACTGGTCGTGTACCATCAA
TTGCTATCGATAAGACAAGTGGTTGTCAAATTTATCTCTCTAAAGATTCTTTAGAAACTG
AAATCGTCTCTTCAAAATCATCTGAAATGAATGTTTTAATTCCAGGTGCAACTGAAAATG
ATGATTTAGTTGAATTAGCTATTCCAGAACAATATAAAACTTCTGTTAAAGGTAATAAAT
TACATACTGAATCAACTTCACATATTTAAAAAAAAAATTTTTTAAATTT
sequence update 2001.11.22
Translated Amino Acid sequence
cwptgiyyyflffvy*pnhiklyflilfvnn*FVFLKKKRXSEATXVELLKRLDQAXTRL
EAVEKS---

---PAPASSAPAAPVAPAVSSTPVESKKGPGLGAVFGELSKGDGVTSGLKKVTNDMKSKN
FTDKSSVVKAADTKVAKVDAPSRPAVFALQGNKWSIEYQVNNKEIVIAEPDSRQTVYIFQ
CVNSLVQIKGKVNAITLDGCKKTSIVFENAISSCEVVNCNGVEIQVTGRVPSIAIDKTSG
CQIYLSKDSLETEIVSSKSSEMNVLIPGATENDDLVELAIPEQYKTSVKGNKLHTESTSH
I*kknfln


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllxfiiifyflyisqii*nyif*fyl*iinlyf*kkkgxxkqlxlny*kd*ikxllv
*kqxknq---

---PAPASSAPAAPVAPAVSSTPVESKKGPGLGAVFGELSKGDGVTSGLKKVTNDMKSKN
FTDKSSVVKAADTKVAKVDAPSRPAVFALQGNKWSIEYQVNNKEIVIAEPDSRQTVYIFQ
CVNSLVQIKGKVNAITLDGCKKTSIVFENAISSCEVVNCNGVEIQVTGRVPSIAIDKTSG
CQIYLSKDSLETEIVSSKSSEMNVLIPGATENDDLVELAIPEQYKTSVKGNKLHTESTSH
I*kknfln

Frame B:
llaywxlllffifcilaksykiiffnfick*licifkkkkxvxsnyx*iikkirssxysf
rssxkin---

---qhqlhqhqppqlhqlfhplqlnqrkvqv*vqfsvnlakvmvlpvv*kklpti*npki
sptnhqllkllilkspklmlhldqpfllskvtngplniklttkklslpsqivvklftfsn
v*tl*fkskvklmqlllmvvkrlqsfskmpfplvklsivmvlkskslvvyhqllsirqvv
vkfislkil*klksslqnhlk*mf*fqvqlkmmi*ln*lfqnniklllkvinyilnqlhi
fkkkif*i

Frame C:
cwptgiyyyflffvy*pnhiklyflilfvnn*FVFLKKKRXSEATXVELLKRLDQAXTRL
EAVEKS---

---stsfistsrpsctscfihss*ikersrfrcsfr*t*qr*wcyqwfkksyqryeiqkf
hrqiisc*sc*y*srqs*csi*tsrfcspr*qmvh*iss*qqrnchcrar*ssnclhfpm
cklfssnqr*s*cnys*wl*kdfnrfrkchfll*scql*wc*npshwsctincyr*dkwl
snlsl*rffrn*nrlfkii*necfnsrcn*k**fs*isysrti*nfc*r**ity*infty
lkkkffkf

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VFL760 (VFL760Q) /CSM/VF/VFL7-C/VFL760Q.Seq.d/ 1469 0.0
SFE296 (SFE296Q) /CSM/SF/SFE2-D/SFE296Q.Seq.d/ 1370 0.0
AFE312 (AFE312Q) /CSM/AF/AFE3-A/AFE312Q.Seq.d/ 1370 0.0
CFF143 (CFF143Q) /CSM/CF/CFF1-B/CFF143Q.Seq.d/ 1368 0.0
AFM838 (AFM838Q) /CSM/AF/AFM8-B/AFM838Q.Seq.d/ 1368 0.0
AFG810 (AFG810Q) /CSM/AF/AFG8-A/AFG810Q.Seq.d/ 1362 0.0
AFE320 (AFE320Q) /CSM/AF/AFE3-A/AFE320Q.Seq.d/ 1352 0.0
AFK512 (AFK512Q) /CSM/AF/AFK5-A/AFK512Q.Seq.d/ 1344 0.0
AFK741 (AFK741Q) /CSM/AF/AFK7-B/AFK741Q.Seq.d/ 1338 0.0
AFM214 (AFM214Q) /CSM/AF/AFM2-A/AFM214Q.Seq.d/ 1320 0.0

own update 2009. 4. 4
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

(U43027) Dictyostelium discoideum cyclase associated protein... 1132 0.0 2
(AU075945) Dictyostelium discoideum slug cDNA, clone SSA180. 1132 0.0 2
(AU034951) Dictyostelium discoideum slug cDNA, clone SLE391. 1132 0.0 2
(AU034738) Dictyostelium discoideum slug cDNA, clone SLE258. 1132 0.0 1
(BJ434661) Dictyostelium discoideum cDNA clone:ddv24h15, 3' ... 1132 0.0 2
(BJ343411) Dictyostelium discoideum cDNA clone:dda16c01, 3' ... 1132 0.0 2
(BJ341148) Dictyostelium discoideum cDNA clone:dda5n09, 3' e... 1132 0.0 2
(BJ403054) Dictyostelium discoideum cDNA clone:dds18l05, 3' ... 1126 0.0 2
(BJ400374) Dictyostelium discoideum cDNA clone:dds9o24, 3' e... 1126 0.0 2
(BJ398493) Dictyostelium discoideum cDNA clone:dds12l15, 3' ... 1126 0.0 2
dna update 2009. 3.24
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(P54654) RecName: Full=Adenylyl cyclase-associated protein; ... 389 e-107
AB014759_1(AB014759|pid:none) Arabidopsis thaliana mRNA for Atca... 194 3e-48
AK071446_1(AK071446|pid:none) Oryza sativa Japonica Group cDNA c... 192 1e-47
AK242106_1(AK242106|pid:none) Oryza sativa Japonica Group cDNA, ... 187 6e-46
CP001332_154(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 186 8e-46
AB014884_1(AB014884|pid:none) Gossypium hirsutum GhCAP mRNA for ... 185 2e-45
EU106855_1(EU106855|pid:none) Gossypium arboreum strain DPL972 a... 185 2e-45
EU106853_1(EU106853|pid:none) Gossypium arboreum strain DPL971 a... 185 2e-45
AK295600_1(AK295600|pid:none) Homo sapiens cDNA FLJ50529 complet... 184 3e-45
AK293134_1(AK293134|pid:none) Homo sapiens cDNA FLJ50434 complet... 184 3e-45
protein update 2009. 6.23
PSORT

psg: 0.69 gvh: 0.49 alm: 0.47 top: 0.53 tms: 0.00 mit: 0.22 mip: 0.03
nuc: 0.04 erl: 0.00 erm: 0.00 pox: 0.30 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: cytoplasmic
28.0 %: nuclear
24.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: vacuolar

>> prediction for VFL760 is cyt

5' end seq. ID VFL760F
5' end seq.
>VFL760F.Seq
ACTGTTGGCCTACTGGNATTTATTATTATTTTTTATTTTTTGTATATTAGCCAAATCATA
TAAAATTATATTTTTTAATTTTATTTGTAAATAATTAATTTGTATTTTTAAAAAAAAAAA
GGANGTCNGAAGCAACTATNGTTGAATTATTAAAAAGATTAGATCAAGCANCTACTCGTT
TAGAAGCAGTNGAAAAATCAATNNNNNNNNNN
Length of 5' end seq. 212
3' end seq. ID VFL760Z
3' end seq.
>VFL760Z.Seq
NNNNNNNNNNCCAGCACCAGCTTCATCAGCACCAGCCGCCCCAGTTGCACCAGCTGTTTC
ATCCACTCCAGTTGAATCAAAGAAAGGTCCAGGTTTAGGTGCAGTTTTCGGTGAACTTAG
CAAAGGTGATGGTGTTACCAGTGGTTTAAAAAAAGTTACCAACGATATGAAATCCAAAAA
TTTCACCGACAAATCATCAGTTGTTAAAGCTGCTGATACTAAAGTCGCCAAAGTTGATGC
TCCATCTAGACCAGCCGTTTTTGCTCTCCAAGGTAACAAATGGTCCATTGAATATCAAGT
TAACAACAAAGAAATTGTCATTGCCGAGCCAGATAGTCGTCAAACTGTTTACATTTTCCA
ATGTGTAAACTCTTTAGTTCAAATCAAAGGTAAAGTTAATGCAATTACTCTTGATGGTTG
TAAAAAGACTTCAATCGTTTTCGAAAATGCCATTTCCTCTTGTGAAGTTGTCAATTGTAA
TGGTGTTGAAATCCAAGTCACTGGTCGTGTACCATCAATTGCTATCGATAAGACAAGTGG
TTGTCAAATTTATCTCTCTAAAGATTCTTTAGAAACTGAAATCGTCTCTTCAAAATCATC
TGAAATGAATGTTTTAATTCCAGGTGCAACTGAAAATGATGATTTAGTTGAATTAGCTAT
TCCAGAACAATATAAAACTTCTGTTAAAGGTAATAAATTACATACTGAATCAACTTCACA
TATTTAAAAAAAAAATTTTTTAAATTT
Length of 3' end seq. 747
Connected seq. ID VFL760P
Connected seq.
>VFL760P.Seq
ACTGTTGGCCTACTGGNATTTATTATTATTTTTTATTTTTTGTATATTAGCCAAATCATA
TAAAATTATATTTTTTAATTTTATTTGTAAATAATTAATTTGTATTTTTAAAAAAAAAAA
GGANGTCNGAAGCAACTATNGTTGAATTATTAAAAAGATTAGATCAAGCANCTACTCGTT
TAGAAGCAGTNGAAAAATCAAT----------CCAGCACCAGCTTCATCAGCACCAGCCG
CCCCAGTTGCACCAGCTGTTTCATCCACTCCAGTTGAATCAAAGAAAGGTCCAGGTTTAG
GTGCAGTTTTCGGTGAACTTAGCAAAGGTGATGGTGTTACCAGTGGTTTAAAAAAAGTTA
CCAACGATATGAAATCCAAAAATTTCACCGACAAATCATCAGTTGTTAAAGCTGCTGATA
CTAAAGTCGCCAAAGTTGATGCTCCATCTAGACCAGCCGTTTTTGCTCTCCAAGGTAACA
AATGGTCCATTGAATATCAAGTTAACAACAAAGAAATTGTCATTGCCGAGCCAGATAGTC
GTCAAACTGTTTACATTTTCCAATGTGTAAACTCTTTAGTTCAAATCAAAGGTAAAGTTA
ATGCAATTACTCTTGATGGTTGTAAAAAGACTTCAATCGTTTTCGAAAATGCCATTTCCT
CTTGTGAAGTTGTCAATTGTAATGGTGTTGAAATCCAAGTCACTGGTCGTGTACCATCAA
TTGCTATCGATAAGACAAGTGGTTGTCAAATTTATCTCTCTAAAGATTCTTTAGAAACTG
AAATCGTCTCTTCAAAATCATCTGAAATGAATGTTTTAATTCCAGGTGCAACTGAAAATG
ATGATTTAGTTGAATTAGCTATTCCAGAACAATATAAAACTTCTGTTAAAGGTAATAAAT
TACATACTGAATCAACTTCACATATTTAAAAAAAAAATTTTTTAAATTT
Length of connected seq. 939
Full length Seq ID -
Full length Seq. -
Length of full length seq. -