>VFL494 (VFL494Q) /CSM/VF/VFL4-D/VFL494Q.Seq.d/
XXXXXXXXXXTGGAAATATAATTTCAAATATCATGGTATCCTTTTATTATGTGTTTTCTT
TGGTGTTGGTATGGTATTTATGTTTCATTATGATCCATTAAAACCTGAATATAAAAGATA
TCAAAAATTCTTTTATGTTACATTTAAAATGGTTGATTCAATAATTTTGGGTTGTGGTTT
TGCATTTTCATATATTGCAGTTAGAATTATTTCATTATTACCACCAAGTAATGGTAAAAA
AGTAGCAATCATTTCATCACTTTGTATTGCCGCTTTATTCTTTATTGGATATGGTCATCC
AATGGCTCATACTCATTCACCATATTCAATGGAGAGTACAGTTATAATTGATTATACAAT
TCATTTACCAATCATTATTTTAACAACTGTATTGGCATTTTATCAATTTAGAATGTTAGA
GTTATCAACTGATTCAAGTTCTTCTATTTGTATGGCTGCTAAATTAAGAAATAGACCACA
TAAATATAGTTTCCCAATCAGAAGTTTAGGTATTAAATCACAAGCTGTAACTAATATTGG
TCAAACAATGGGCCATGGAGTTGGTGTAAGTGGT

---KYNFKYHGILLLCVFFGVGMVFMFHYDPLKPEYKRYQKFFYVTFKMVDSIILGCGFA
FSYIAVRIISLLPPSNGKKVAIISSLCIAALFFIGYGHPMAHTHSPYSMESTVIIDYTIH
LPIIILTTVLAFYQFRMLELSTDSSSSICMAAKLRNRPHKYSFPIRSLGIKSQAVTNIGQ
TMGHGVGVSG

Frame A:
---gniisnimvsfyyvfslvlvwylcfimih*nlnikdiknsfmlhlkwliq*fwvvvl
hfhilqlelfhyyhqvmvkk*qsfhhfvlplyslldmviqwlilihhiqwrvql*liiqf
iyqslf*qlywhfinlec*syqliqvllfvwlln*eidhinivsqsev*vlnhkl*lilv
kqwamelv*v


Frame B:
---ei*fqiswypfimcflwcwygiyvsl*sikt*i*kiskillcyi*ng*fnnfglwfc
ifiycs*nyfiittk*w*kssnhfitlycrfilywiwssngsysftifngeysyn*lyns
ftnhyfnncigilsi*nvrvin*fkffylygc*ikk*tt*i*fpnqkfry*itscn*yws
nngpwswckw


Frame C:
---KYNFKYHGILLLCVFFGVGMVFMFHYDPLKPEYKRYQKFFYVTFKMVDSIILGCGFA
FSYIAVRIISLLPPSNGKKVAIISSLCIAALFFIGYGHPMAHTHSPYSMESTVIIDYTIH
LPIIILTTVLAFYQFRMLELSTDSSSSICMAAKLRNRPHKYSFPIRSLGIKSQAVTNIGQ
TMGHGVGVSG

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFL494 (VFL494Q) /CSM/VF/VFL4-D/VFL494Q.Seq.d/                       1118   0.0
SSC351 (SSC351Q) /CSM/SS/SSC3-C/SSC351Q.Seq.d/                        244   1e-63
VFM196 (VFM196Q) /CSM/VF/VFM1-D/VFM196Q.Seq.d/                         48   1e-04
VFE825 (VFE825Q) /CSM/VF/VFE8-B/VFE825Q.Seq.d/                         48   1e-04
VFC269 (VFC269Q) /CSM/VF/VFC2-C/VFC269Q.Seq.d/                         46   6e-04
VFK815 (VFK815Q) /CSM/VF/VFK8-A/VFK815Q.Seq.d/                         40   0.036
SLI323 (SLI323Q) /CSM/SL/SLI3-A/SLI323Q.Seq.d/                         36   0.56
CHO693 (CHO693Q) /CSM/CH/CHO6-D/CHO693Q.Seq.d/                         36   0.56
AFO507 (AFO507Q) /CSM/AF/AFO5-A/AFO507Q.Seq.d/                         36   0.56
VHO171 (VHO171Q) /CSM/VH/VHO1-C/VHO171Q.Seq.d/                         34   2.2

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ434109) Dictyostelium discoideum cDNA clone:ddv23l24, 3' ...  1118   0.0    1
(AU051901) Dictyostelium discoideum slug cDNA, clone SSC351.      244   3e-60  1
(BJ427964) Dictyostelium discoideum cDNA clone:ddv10b08, 3' ...    48   6e-11  3
(BJ435066) Dictyostelium discoideum cDNA clone:ddv25o23, 3' ...    48   7e-11  3
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423...    48   4e-08  4
(BV659455) S215P60370RB8.T0 Clara Pan troglodytes troglodyte...    50   0.091  1
(AL365223) Human DNA sequence from clone RP11-55K22 on chrom...    50   0.091  1
(AC225458) Medicago truncatula clone mth2-161l3, WORKING DRA...    34   0.29   5
(AL627405) Mouse DNA sequence from clone RP23-183D11 on chro...    48   0.36   1
(AP005900) Homo sapiens genomic DNA, chromosome 18p clone:RP...    48   0.36   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001519_16(CP001519|pid:none) Borrelia sp. SV1 plasmid SV1_lp17...    34   2.4
CP000881_91(CP000881|pid:none) Hemiselmis andersenii chromosome ...    34   3.2
AY302747_1(AY302747|pid:none) Avian infectious bronchitis virus ...    33   4.2
AY686321_1(AY686321|pid:none) Gopherus polyphemus isolate GPOR33...    33   7.1
AY325731_1(AY325731|pid:none) Avian infectious bronchitis virus ...    33   7.1
(Q9J3N8) RecName: Full=Membrane protein;          Short=M protei...    32   9.3
AF206269_1(AF206269|pid:none) Avian infectious bronchitis virus ...    32   9.3
(P69603) RecName: Full=Membrane protein;          Short=M protei...    32   9.3
EU780078_1(EU780078|pid:none) Infectious bronchitis virus isolat...    32   9.3
(P69606) RecName: Full=Membrane protein;          Short=M protei...    32   9.3

 psg: 1.00  gvh: 0.54  alm: 0.19  top: 0.47  tms: 0.27  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 32.0 %: endoplasmic reticulum
	 28.0 %: plasma membrane
	 20.0 %: mitochondrial
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for VFL494 is end

>VFL494Z.Seq
NNNNNNNNNNTGGAAATATAATTTCAAATATCATGGTATCCTTTTATTATGTGTTTTCTT
TGGTGTTGGTATGGTATTTATGTTTCATTATGATCCATTAAAACCTGAATATAAAAGATA
TCAAAAATTCTTTTATGTTACATTTAAAATGGTTGATTCAATAATTTTGGGTTGTGGTTT
TGCATTTTCATATATTGCAGTTAGAATTATTTCATTATTACCACCAAGTAATGGTAAAAA
AGTAGCAATCATTTCATCACTTTGTATTGCCGCTTTATTCTTTATTGGATATGGTCATCC
AATGGCTCATACTCATTCACCATATTCAATGGAGAGTACAGTTATAATTGATTATACAAT
TCATTTACCAATCATTATTTTAACAACTGTATTGGCATTTTATCAATTTAGAATGTTAGA
GTTATCAACTGATTCAAGTTCTTCTATTTGTATGGCTGCTAAATTAAGAAATAGACCACA
TAAATATAGTTTCCCAATCAGAAGTTTAGGTATTAAATCACAAGCTGTAACTAATATTGG
TCAAACAATGGGCCATGGAGTTGGTGTAAGTGGT