>VFL117 (VFL117Q) /CSM/VF/VFL1-A/VFL117Q.Seq.d/
XXXXXXXXXXTAACTAGTATGTTAATGGATATTAAATTTGGTCAAGCAGTTGGATTTTTA
ATTTTATTAGCAATTTATTGTGCAATGGTAATTGGATTTGGTATGGCTTTATTGAGAAGT
TTACAAAATCATAAAAAAAATACACCATTTCAACATTTTCAAGATATGATTTTTAAAACT
AAAGTTTTGATAACAACTGTATCTTTGGTATTTATTTGTACAGTTATTGAAGAGGGTATA
TATCAATTTGCATTTGAAGAATTTTCAACTTCAACAAGTGTTCAAAGTAATTTCATTACT
TATTTAATTGATACAACTCAAATGATTGTTGTTATGTACATTTTAGCAAATGGAAAATTT
TCAAATTATATATTATTCAGGAAAGTTAAAACAACTTCATTTAATTCAAATGAAAAATCT
AGTTTAGATTCACAAGGTTCTAAAATAAATACTAAAAAATCATATCCTTCAAATTATGAT
CATAGTGGTAAATCGAATGAATTATCAATTGATTTAGATATTACATACTCAAAAAATTCA
ATTGAAAGTAATAGTATACCAAATTCAAATATAACAATTGATAACACTGGT

---TSMLMDIKFGQAVGFLILLAIYCAMVIGFGMALLRSLQNHKKNTPFQHFQDMIFKTK
VLITTVSLVFICTVIEEGIYQFAFEEFSTSTSVQSNFITYLIDTTQMIVVMYILANGKFS
NYILFRKVKTTSFNSNEKSSLDSQGSKINTKKSYPSNYDHSGKSNELSIDLDITYSKNSI
ESNSIPNSNITIDNTG

Frame A:
---n*yvngy*iwssswifnfisnllcngnwiwygfiekftks*kkytistfsrydf*n*
sfdnncifgiylysy*rgyisici*rifnfnkcsk*fhylfn*ynsndccyvhfskwkif
klyiiqes*nnfi*fk*ki*frftrf*nky*kiisfkl*s*w*ie*iin*fryyilkkfn
*k**ytkfkynn**hw


Frame B:
---TSMLMDIKFGQAVGFLILLAIYCAMVIGFGMALLRSLQNHKKNTPFQHFQDMIFKTK
VLITTVSLVFICTVIEEGIYQFAFEEFSTSTSVQSNFITYLIDTTQMIVVMYILANGKFS
NYILFRKVKTTSFNSNEKSSLDSQGSKINTKKSYPSNYDHSGKSNELSIDLDITYSKNSI
ESNSIPNSNITIDNTG


Frame C:
---lvc*wilnlvkqldf*fy*qfivqw*ldlvwly*evykiikkihhfnifki*flklk
f**qlylwylfvqllkrvyinlhlknfqlqqvfkvislli*liqlk*lllctf*qmenfq
iiyysgklkqlhliqmknlv*ihkvlk*ilknhilqimiivvnrmnyqli*ilhtqkiql
kvivyqiqi*qlitl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFL117 (VFL117Q) /CSM/VF/VFL1-A/VFL117Q.Seq.d/                       1104   0.0
CHK889 (CHK889Q) /CSM/CH/CHK8-D/CHK889Q.Seq.d/                         40   0.037
VSJ343 (VSJ343Q) /CSM/VS/VSJ3-B/VSJ343Q.Seq.d/                         38   0.15
VSE307 (VSE307Q) /CSM/VS/VSE3-A/VSE307Q.Seq.d/                         38   0.15
VSB157 (VSB157Q) /CSM/VS/VSB1-C/VSB157Q.Seq.d/                         38   0.15
SSK767 (SSK767Q) /CSM/SS/SSK7-C/SSK767Q.Seq.d/                         38   0.15
SSI276 (SSI276Q) /CSM/SS/SSI2-D/SSI276Q.Seq.d/                         38   0.15
SSF673 (SSF673Q) /CSM/SS/SSF6-D/SSF673Q.Seq.d/                         38   0.15
SSA521 (SSA521Q) /CSM/SS/SSA5-A/SSA521Q.Seq.d/                         38   0.15
SLH565 (SLH565Q) /CSM/SL/SLH5-C/SLH565Q.Seq.d/                         38   0.15

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ433804) Dictyostelium discoideum cDNA clone:ddv23a05, 3' ...   894   0.0    2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    80   5e-24  10
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    32   0.003  19
(AF083031) Guillardia theta nucleomorph chromosome 3, comple...    38   0.008  7
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    38   0.011  12
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    36   0.016  10
(CP000233) Lactobacillus salivarius UCC118, complete genome.       38   0.023  19
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    38   0.048  7
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    30   0.073  10
(FB571381) Sequence 248 from Patent EP1865317.                     50   0.094  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116984_192(AC116984|pid:none) Dictyostelium discoideum chromos...   181   1e-44
AC116987_18(AC116987|pid:none) Dictyostelium discoideum chromoso...    59   8e-08
AC116956_57(AC116956|pid:none) Dictyostelium discoideum chromoso...    47   5e-04
CP000672_1295(CP000672|pid:none) Haemophilus influenzae PittGG, ...    37   0.31
CP000383_246(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340...    34   2.6
AE014186_398(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    34   2.6
AL034560_16(AL034560|pid:none) Plasmodium falciparum MAL3P8, com...    34   2.6
AM920428_492(AM920428|pid:none) Penicillium chrysogenum Wisconsi...    34   3.4
(Q927F9) RecName: Full=Potassium-transporting ATPase A chain;   ...    33   4.5
CP000472_3311(CP000472|pid:none) Shewanella piezotolerans WP3, c...    33   5.8

 psg: 0.97  gvh: 0.70  alm: 0.27  top: 0.73  tms: 0.07  mit: 0.16  mip: 0.07
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 1.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 32.0 %: extracellular, including cell wall
	 32.0 %: plasma membrane
	 20.0 %: endoplasmic reticulum
	 12.0 %: Golgi
	  4.0 %: nuclear

>> prediction for VFL117 is exc

>VFL117Z.Seq
NNNNNNNNNNTAACTAGTATGTTAATGGATATTAAATTTGGTCAAGCAGTTGGATTTTTA
ATTTTATTAGCAATTTATTGTGCAATGGTAATTGGATTTGGTATGGCTTTATTGAGAAGT
TTACAAAATCATAAAAAAAATACACCATTTCAACATTTTCAAGATATGATTTTTAAAACT
AAAGTTTTGATAACAACTGTATCTTTGGTATTTATTTGTACAGTTATTGAAGAGGGTATA
TATCAATTTGCATTTGAAGAATTTTCAACTTCAACAAGTGTTCAAAGTAATTTCATTACT
TATTTAATTGATACAACTCAAATGATTGTTGTTATGTACATTTTAGCAAATGGAAAATTT
TCAAATTATATATTATTCAGGAAAGTTAAAACAACTTCATTTAATTCAAATGAAAAATCT
AGTTTAGATTCACAAGGTTCTAAAATAAATACTAAAAAATCATATCCTTCAAATTATGAT
CATAGTGGTAAATCGAATGAATTATCAATTGATTTAGATATTACATACTCAAAAAATTCA
ATTGAAAGTAATAGTATACCAAATTCAAATATAACAATTGATAACACTGGT