AFM826
Library AF
(Link to library)
Clone ID AFM826
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig -
Original site URL
Representative seq. ID
(Link to Original site)
Representative DNA sequence
>AFM826 (AFM826Q) /CSM/AF/AFM8-B/AFM826Q.Seq.d/
XXXXXXXXXXTAAATCAATTCCAGATTTATTGGAATTGGATCATCTTACTGTTTCTGGTG
ATGTTTACTTTGGTTCAAGAATTACTCTTAAAGGTACAGTCATTATTGTAGCTAATCATG
GTGAACGTGTTGATATTCCAGATGGTGTGGTNNTAGAAAATAAAG
sequence update 2009. 4. 3
Translated Amino Acid sequence
---KSIPDLLELDHLTVSGDVYFGSRITLKGTVIIVANHGERVDIPDGVVXENK


Translated Amino Acid sequence (All Frames)
Frame A:
---KSIPDLLELDHLTVSGDVYFGSRITLKGTVIIVANHGERVDIPDGVVXENK


Frame B:
---nqfqiywnwiillflvmftlvqelllkvqsll*limvnvlifqmvwx*kik


Frame C:
---insrfigigssycfw*cllwfknys*ryshycs*sw*tc*ysrwcgxrk*


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VSD295 (VSD295Q) /CSM/VS/VSD2-D/VSD295Q.Seq.d/ 295 1e-79
VFL461 (VFL461Q) /CSM/VF/VFL4-C/VFL461Q.Seq.d/ 295 1e-79
VFK853 (VFK853Q) /CSM/VF/VFK8-C/VFK853Q.Seq.d/ 295 1e-79
SSK668 (SSK668Q) /CSM/SS/SSK6-C/SSK668Q.Seq.d/ 295 1e-79
SSI236 (SSI236Q) /CSM/SS/SSI2-B/SSI236Q.Seq.d/ 295 1e-79
SSH420 (SSH420Q) /CSM/SS/SSH4-A/SSH420Q.Seq.d/ 295 1e-79
SSF238 (SSF238Q) /CSM/SS/SSF2-B/SSF238Q.Seq.d/ 295 1e-79
SSE519 (SSE519Q) /CSM/SS/SSE5-A/SSE519Q.Seq.d/ 295 1e-79
SSB729 (SSB729Q) /CSM/SS/SSB7-B/SSB729Q.Seq.d/ 295 1e-79
SFK890 (SFK890Q) /CSM/SF/SFK8-D/SFK890Q.Seq.d/ 295 1e-79

own update 2009. 4. 3
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

(Y00145) Dictyostelium discoideum UDP glucose pyrophosphoryl... 295 2e-76 1
(AU284944) Dictyostelium discoideum gamete cDNA clone:FC-BQ2... 295 2e-76 1
(AU284943) Dictyostelium discoideum gamete cDNA clone:FC-BQ2... 295 2e-76 1
(AU263795) Dictyostelium discoideum vegetative cDNA clone:VS... 295 2e-76 1
(AU038210) Dictyostelium discoideum slug cDNA, clone SSH420. 295 2e-76 1
(AU037295) Dictyostelium discoideum slug cDNA, clone SSB729. 295 2e-76 1
(C94412) Dictyostelium discoideum slug cDNA, clone SSK668. 295 2e-76 1
(C92762) Dictyostelium discoideum slug cDNA, clone SSF238. 295 2e-76 1
(C92520) Dictyostelium discoideum slug cDNA, clone SSE519. 295 2e-76 1
(C90195) Dictyostelium discoideum slug cDNA, clone SSI236. 295 2e-76 1
dna update 2009. 4.14
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(P08800) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 102 5e-21
BC026626_1(BC026626|pid:none) Mus musculus UDP-glucose pyrophosp... 85 8e-16
CU651563_4(CU651563|pid:none) Zebrafish DNA sequence from clone ... 85 8e-16
S35692(S35692)UTP-glucose-1-phosphate uridylyltransferase (EC 2.... 85 8e-16
(Q91ZJ5) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 85 8e-16
S62599(S62599)UTP-glucose-1-phosphate uridylyltransferase (EC 2.... 85 8e-16
AK153885_1(AK153885|pid:none) Mus musculus 2 days neonate thymus... 85 8e-16
CR860388_1(CR860388|pid:none) Pongo abelii mRNA; cDNA DKFZp459A0... 85 8e-16
AK300731_1(AK300731|pid:none) Homo sapiens cDNA FLJ56155 complet... 85 8e-16
BC084711_1(BC084711|pid:none) Rattus norvegicus UDP-glucose pyro... 85 8e-16
protein update 2009. 4. 6
PSORT

psg: 0.00 gvh: 0.00 alm: 0.00 top: 0.00 tms: 0.00 mit: 0.00 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

100.0 %:

>> prediction for AFM826 is

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID AFM826Z
3' end seq.
>AFM826Z.Seq
XXXXXXXXXXTAAATCAATTCCAGATTTATTGGAATTGGATCATCTTACTGTTTCTGGTG
ATGTTTACTTTGGTTCAAGAATTACTCTTAAAGGTACAGTCATTATTGTAGCTAATCATG
GTGAACGTGTTGATATTCCAGATGGTGTGGTNNTAGAAAATAAAG
Length of 3' end seq. 165
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -