VFJ721
Library VF
(Link to library)
Clone ID VFJ721
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U14740-1
Original site URL
Representative seq. ID VFJ721P
(Link to Original site)
Representative DNA sequence
>VFJ721 (VFJ721Q) /CSM/VF/VFJ7-A/VFJ721Q.Seq.d/
GTTTTTGACTCAACAAAAAAAAGCAGATTAATTTATTATNAACATCATCAACAATATCCT
CATCATCGTCATCATCATCATAAAAAGTCATACACATAATGGAACCACAATTTAAAGTTA
AAATCGATAATGATTCAGCTAGAATTTTAAAAGAATTAGCAGAAAAAAAGAGAGATGAAG
GTCTTCGTGTTGTTTTCATTGGTCCACCAGGTTCAGGTAAAGGTACTCAAGCACCATTAG
TTAAAGAAGATTATTGTTTATGTCATCTTTCAACTGGTGATATGTTAAGAGCTGCCATTG
AACAAGGTACTGAAACAGGTAAACAAGCTAAAACAATCATGGATCAAGGTGGTCTTGTTC
CAGATGAAGTTATGGTTAATATGATTAAAGAAAATATTCAAACTCCTGAATGTAAAAAAG
GTTTCATTCTTGATGGTTTCCCAAGAACTGTTCCACAAGCTGAAAAACTTGATAAAATGT
TAGCAGAAGATAATAAAAAGATTGACCATGTTTTAGATTTTGCAATTGACGATTCCTTAT
TAGTTAAACGTATCACTGGTAGACTTGTTCGTCCATCAAGTGGTAGAAGTTATCXXXXXX
XXXXAATTAAAAAAAANGAAANCTAATAATAGAATAGAATAGAATACACACACACCACNC
ACACACAAATAATATTTCAGAAACAATTNAATTTCCAAACAATCCCAACCAACCAACACA
ATCAATCAATCAATCAATTANCAACCNACANCGACAACT
sequence update 2001.11.22
Translated Amino Acid sequence
f*lnkkkqinllxtsstissssssss*KVIHIMEPQFKVKIDNDSARILKELAEKKRDEG
LRVVFIGPPGSGKGTQAPLVKEDYCLCHLSTGDMLRAAIEQGTETGKQAKTIMDQGGLVP
DEVMVNMIKENIQTPECKKGFILDGFPRTVPQAEKLDKMLAEDNKKIDHVLDFAIDDSLL
VKRITGRLVRPSSGRSY---

---LKKXKXNNRIE*nthtpxthk*yfrnnxiskqsqptntinqsinxqptxtt


Translated Amino Acid sequence (All Frames)
Frame A:
vfdstkksrliyyxhhqqyphhrhhhhkksyt*wnhnlklksimiqlef*kn*qkkremk
vfvlfslvhqvqvkvlkhh*lkkiivyvifqlvic*elplnkvlkqvnklkqswikvvlf
qmklwli*lkkifkllnvkkvsflmvsqelfhklknlikc*qkiikrltmf*ilqltipy
*lnvslvdlfvhqvvevi---

---n*kkxxliie*nrihthhxhtnnisetixfpnnpnqptqsinqsixnxxrq

Frame B:
fltqqkkad*fixniinniliiviiiikshthngtti*s*nr**fs*nfkrisrkker*r
ssccfhwstrfr*rysstis*rrllfmssfnw*yvksch*try*nr*ts*nnhgsrwscs
r*syg*yd*rkysns*m*krfhs*wfpkncsts*kt**nvsrr**kd*pcfrfcn*rfli
s*tyhw*tcssikw*kl---

---ikkxex***nrieythtthtqiifqkqxnfqtiptnqhnqsinqlxtxxdn

Frame C:
f*lnkkkqinllxtsstissssssss*KVIHIMEPQFKVKIDNDSARILKELAEKKRDEG
LRVVFIGPPGSGKGTQAPLVKEDYCLCHLSTGDMLRAAIEQGTETGKQAKTIMDQGGLVP
DEVMVNMIKENIQTPECKKGFILDGFPRTVPQAEKLDKMLAEDNKKIDHVLDFAIDDSLL
VKRITGRLVRPSSGRSY---

---LKKXKXNNRIE*nthtpxthk*yfrnnxiskqsqptntinqsinxqptxtt

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VFJ721 (VFJ721Q) /CSM/VF/VFJ7-A/VFJ721Q.Seq.d/ 975 0.0
AFL877 (AFL877Q) /CSM/AF/AFL8-D/AFL877Q.Seq.d/ 842 0.0
VHF285 (VHF285Q) /CSM/VH/VHF2-D/VHF285Q.Seq.d/ 478 e-134
VFB695 (VFB695Q) /CSM/VF/VFB6-D/VFB695Q.Seq.d/ 456 e-127
VHN534 (VHN534Q) /CSM/VH/VHN5-B/VHN534Q.Seq.d/ 50 5e-05
SSI365 (SSI365Q) /CSM/SS/SSI3-C/SSI365Q.Seq.d/ 50 5e-05
VSH292 (VSH292Q) /CSM/VS/VSH2-D/VSH292Q.Seq.d/ 48 2e-04
VSI524 (VSI524Q) /CSM/VS/VSI5-A/VSI524Q.Seq.d/ 38 0.19
VHO495 (VHO495Q) /CSM/VH/VHO4-D/VHO495Q.Seq.d/ 38 0.19
VFO820 (VFO820Q) /CSM/VF/VFO8-A/VFO820Q.Seq.d/ 38 0.19

own update 2009. 4. 4
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AX489382|AX489382.1 Sequence 6682 from Patent WO02053728. 62 3e-16 3
BI450939|BI450939.1 kt79e09.y4 Strongyloides ratti L2 SL1 TOPO v2 Strongyloides ratti cDNA 5' similar to SW:KADX_CAEEL P34346 PROBABLE ADENYLATE KINASE ISOENZYME C29E4.8 ;, mRNA sequence. 62 4e-14 4
CA898809|CA898809.1 PCEP05779 Scarlet Runner Bean Embryo-Proper Region Phaseolus coccineus cDNA 5' similar to D10335: adenylate kinase-b [Oryza sativa]; Similar to At5g63400: adenylate kinase, mRNA sequence. 70 7e-13 2
AW156723|AW156723.1 se29h12.y1 Gm-c1015 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1015-2688 5' similar to SW:KADB_ORYSA Q08480 ADENYLATE KINASE B ;, mRNA sequence. 68 3e-12 2
AJ224659|AJ224659.1 Neocallimastix frontalis mRNA for hydrogenosomal adenylate kinase hdgAKL2.2, partial. 58 4e-12 2
BG726383|BG726383.1 sae09e07.y1 Gm-c1067 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1067-2509 5' similar to SW:KADB_ORYSA Q08480 ADENYLATE KINASE B ;, mRNA sequence. 62 5e-12 3
AZ930668|AZ930668.1 474.dhz57c09.s1 Saccharomyces unisporus NRRL Y-1556 Saccharomyces unisporus genomic clone 474.dhz57c09.s1, DNA sequence. 60 5e-12 2
BE021106|BE021106.1 sm55e02.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-7827 5' similar to SW:KADB_ORYSA Q08480 ADENYLATE KINASE B ;, mRNA sequence. 62 6e-12 3
AW597647|AW597647.1 sj49a11.y1 Gm-c1033 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1033-597 5' similar to SW:KADB_ORYSA Q08480 ADENYLATE KINASE B ;, mRNA sequence. 62 6e-12 3
CA936048|CA936048.1 sav05b03.y1 Gm-c1048 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1048-4302 5' similar to SW:KADB_ORYSA Q08480 ADENYLATE KINASE B ;, mRNA sequence. 62 6e-12 3
dna update 2004. 1.19
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

AJ224659_1(AJ224659|pid:none) Neocallimastix frontalis mRNA for ... 200 5e-50
AJ224658_1(AJ224658|pid:none) Neocallimastix frontalis mRNA for ... 199 8e-50
(B0XPW9) RecName: Full=Adenylate kinase 1; Short=AK 1; ... 197 2e-49
CU928169_428(CU928169|pid:none) Kluyveromyces thermotolerans str... 197 4e-49
(B2CNY4) RecName: Full=Adenylate kinase 1; Short=AK 1; ... 194 3e-48
(Q2UBH0) RecName: Full=Adenylate kinase 1; Short=AK 1; ... 193 4e-48
AM920427_531(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 192 1e-47
(Q74ZL1) RecName: Full=Adenylate kinase 1; Short=AK 1; ... 191 2e-47
(Q4PCS5) RecName: Full=Adenylate kinase 1; Short=AK 1; ... 190 5e-47
AP007161_847(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 189 6e-47
protein update 2009. 6.22
PSORT

psg: 0.50 gvh: 0.40 alm: 0.49 top: 0.53 tms: 0.00 mit: 0.18 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: nuclear
36.0 %: cytoplasmic
16.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for VFJ721 is nuc

5' end seq. ID VFJ721F
5' end seq.
>VFJ721F.Seq
GTTTTTGACTCAACAAAAAAAAGCAGATTAATTTATTATNAACATCATCAACAATATCCT
CATCATCGTCATCATCATCATAAAAAGTCATACACATAATGGAACCACAATTTAAAGTTA
AAATCGATAATGATTCAGCTAGAATTTTAAAAGAATTAGCAGAAAAAAAGAGAGATGAAG
GTCTTCGTGTTGTTTTCATTGGTCCACCAGGTTCAGGTAAAGGTACTCAAGCACCATTAG
TTAAAGAAGATTATTGTTTATGTCATCTTTCAACTGGTGATATGTTAAGAGCTGCCATTG
AACAAGGTACTGAAACAGGTAAACAAGCTAAAACAATCATGGATCAAGGTGGTCTTGTTC
CAGATGAAGTTATGGTTAATATGATTAAAGAAAATATTCAAACTCCTGAATGTAAAAAAG
GTTTCATTCTTGATGGTTTCCCAAGAACTGTTCCACAAGCTGAAAAACTTGATAAAATGT
TAGCAGAAGATAATAAAAAGATTGACCATGTTTTAGATTTTGCAATTGACGATTCCTTAT
TAGTTAAACGTATCACTGGTAGACTTGTTCGTCCATCAAGTGGTAGAAGTTATCNNNNNN
NNNN
Length of 5' end seq. 604
3' end seq. ID VFJ721Z
3' end seq.
>VFJ721Z.Seq
NNNNNNNNNNAATTAAAAAAAANGAAANCTAATAATAGAATAGAATAGAATACACACACA
CCACNCACACACAAATAATATTTCAGAAACAATTNAATTTCCAAACAATCCCAACCAACC
AACACAATCAATCAATCAATCAATTANCAACCNACANCGACAACT
Length of 3' end seq. 165
Connected seq. ID VFJ721P
Connected seq.
>VFJ721P.Seq
GTTTTTGACTCAACAAAAAAAAGCAGATTAATTTATTATNAACATCATCAACAATATCCT
CATCATCGTCATCATCATCATAAAAAGTCATACACATAATGGAACCACAATTTAAAGTTA
AAATCGATAATGATTCAGCTAGAATTTTAAAAGAATTAGCAGAAAAAAAGAGAGATGAAG
GTCTTCGTGTTGTTTTCATTGGTCCACCAGGTTCAGGTAAAGGTACTCAAGCACCATTAG
TTAAAGAAGATTATTGTTTATGTCATCTTTCAACTGGTGATATGTTAAGAGCTGCCATTG
AACAAGGTACTGAAACAGGTAAACAAGCTAAAACAATCATGGATCAAGGTGGTCTTGTTC
CAGATGAAGTTATGGTTAATATGATTAAAGAAAATATTCAAACTCCTGAATGTAAAAAAG
GTTTCATTCTTGATGGTTTCCCAAGAACTGTTCCACAAGCTGAAAAACTTGATAAAATGT
TAGCAGAAGATAATAAAAAGATTGACCATGTTTTAGATTTTGCAATTGACGATTCCTTAT
TAGTTAAACGTATCACTGGTAGACTTGTTCGTCCATCAAGTGGTAGAAGTTATC------
----AATTAAAAAAAANGAAANCTAATAATAGAATAGAATAGAATACACACACACCACNC
ACACACAAATAATATTTCAGAAACAATTNAATTTCCAAACAATCCCAACCAACCAACACA
ATCAATCAATCAATCAATTANCAACCNACANCGACAACT
Length of connected seq. 749
Full length Seq ID -
Full length Seq. -
Length of full length seq. -