>AFM734 (AFM734Q) /CSM/AF/AFM7-B/AFM734Q.Seq.d/
XXXXXXXXXXTCAAATTTAGCAGGTAATAGATTAACAGAAGAATATTATAGAATTTTATC
TAGTAAAAATATTACAGTCAATCCAATTAATTTAATTAAAAAAGTAGAGATTAAAACTGG
TGAATTTGGTATTACACCATACAATATACCAACACTCACTGAATCTTATAAAAGATATGT
TACATTAGAAACTATTAGAGATTTAAAAGAAACTTCTTGTAGAGTTTCTGATACAAAGGA
TTTAGGTGAAGATATAAATATAGCACAAGTACCATATGAATTGCCAGATGGTAATTTATT
AGAGATTGGTTCAGATAGATTTCAAATTCCTGAATTATTATTTAATCCAACACCATTGAA
TGAACAAATTTTAAATAACAATAATAATAATAGCAATGGTGAGAATACAACAACATCATC
AGTTGTTCAACAACCACAATATCAAGGATTAGGAAGAATGATTATAGAATCATTAGAGAA
AAGTGATACAGATATTCGTAAAGAATTAATAAGTAATTTAATTATAACTGGTGGTAATAC
ATTATTTGCAGGTTTCCAAGAAAGATTAGTTAGAGACATTTCTGAAATCTCTTATAATAA
ACCAAAAATCGTTGCAAATCAAACTGAAAAAAAAGAATTCAGTTTGGATTGGTGGTT

---NLAGNRLTEEYYRILSSKNITVNPINLIKKVEIKTGEFGITPYNIPTLTESYKRYVT
LETIRDLKETSCRVSDTKDLGEDINIAQVPYELPDGNLLEIGSDRFQIPELLFNPTPLNE
QILNNNNNNSNGENTTTSSVVQQPQYQGLGRMIIESLEKSDTDIRKELISNLIITGGNTL
FAGFQERLVRDISEISYNKPKIVANQTEKKEFSLDWW

Frame A:
---qi*qvid*qkniiefylvkilqsiqli*lkk*rlklvnlvlhhtiyqhslnlikdml
h*kllei*kkllvefliqri*vki*i*hkyhmncqmviy*rlvqidfkflnyyliqhh*m
nkf*itiiiiamvriqqhhqlfnnhnikd*ee*l*nh*rkviqifvkn**vi*l*lvvih
ylqvskkd*letflksliinqkslqiklkkknsvwigg


Frame B:
---kfsr**inrril*nfi**kyysqsn*fn*ksrd*nw*iwyytiqytnth*il*kicy
irny*rfkrnfl*sf*ykgfr*rykyststi*iarw*firdwfr*isns*iii*sntie*
tnfk*q****qw*eynniiscstttisrirkndyriirek*yrys*rink*fnynww*yi
icrfprkis*rhf*nll**tknrcksn*kkriqfglvv


Frame C:
---NLAGNRLTEEYYRILSSKNITVNPINLIKKVEIKTGEFGITPYNIPTLTESYKRYVT
LETIRDLKETSCRVSDTKDLGEDINIAQVPYELPDGNLLEIGSDRFQIPELLFNPTPLNE
QILNNNNNNSNGENTTTSSVVQQPQYQGLGRMIIESLEKSDTDIRKELISNLIITGGNTL
FAGFQERLVRDISEISYNKPKIVANQTEKKEFSLDWW

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFM734 (AFM734Q) /CSM/AF/AFM7-B/AFM734Q.Seq.d/                       1235   0.0
AFG296 (AFG296Q) /CSM/AF/AFG2-D/AFG296Q.Seq.d/                       1221   0.0
SFC783 (SFC783Q) /CSM/SF/SFC7-D/SFC783Q.Seq.d/                       1213   0.0
CFH524 (CFH524Q) /CSM/CF/CFH5-A/CFH524Q.Seq.d/                       1178   0.0
SFL243 (SFL243Q) /CSM/SF/SFL2-B/SFL243Q.Seq.d/                       1132   0.0
SFF737 (SFF737Q) /CSM/SF/SFF7-B/SFF737Q.Seq.d/                       1126   0.0
SFB730 (SFB730Q) /CSM/SF/SFB7-B/SFB730Q.Seq.d/                        902   0.0
CFK273 (CFK273Q) /CSM/CF/CFK2-D/CFK273Q.Seq.d/                        844   0.0
AFL224 (AFL224Q) /CSM/AF/AFL2-A/AFL224Q.Seq.d/                        761   0.0
AFA162 (AFA162Q) /CSM/AF/AFA1-C/AFA162Q.Seq.d/                        650   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ347155) Dictyostelium discoideum cDNA clone:dda26d09, 3' ...  1221   0.0    2
(BJ342431) Dictyostelium discoideum cDNA clone:dda13o24, 3' ...  1221   0.0    2
(BJ399638) Dictyostelium discoideum cDNA clone:dds6f21, 3' e...  1213   0.0    2
(BJ374769) Dictyostelium discoideum cDNA clone:ddc16o05, 3' ...  1174   0.0    2
(BJ401453) Dictyostelium discoideum cDNA clone:dds23e12, 3' ...  1128   0.0    2
(BJ398416) Dictyostelium discoideum cDNA clone:dds12j09, 3' ...  1122   0.0    2
(BJ399149) Dictyostelium discoideum cDNA clone:dds4l07, 3' e...   898   0.0    2
(BJ376242) Dictyostelium discoideum cDNA clone:ddc21a20, 3' ...   841   0.0    2
(BJ345282) Dictyostelium discoideum cDNA clone:dda23o06, 3' ...   759   0.0    2
(BJ342799) Dictyostelium discoideum cDNA clone:dda1k15, 3' e...   567   0.0    3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q84M92) RecName: Full=Actin-related protein 4;  &AK228098_1(AK2...   126   5e-28
AY087788_1(AY087788|pid:none) Arabidopsis thaliana clone 38419 m...   126   6e-28
BT038602_1(BT038602|pid:none) Zea mays full-length cDNA clone ZM...   125   8e-28
AC152123_6(AC152123|pid:none) Genomic sequence for broccoli [Bra...   123   4e-27
CR954204_278(CR954204|pid:none) Ostreococcus tauri strain OTTH05...   105   1e-21
AB086366_1(AB086366|pid:none) Dileptus margaritifer mRNA for act...    88   2e-16
AB169693_1(AB169693|pid:none) Macaca fascicularis brain cDNA, cl...    87   4e-16
AK297620_1(AK297620|pid:none) Homo sapiens cDNA FLJ52695 complet...    87   4e-16
AB170491_1(AB170491|pid:none) Macaca fascicularis brain cDNA clo...    87   4e-16
DQ980427_1(DQ980427|pid:none) Peridinium limbatum clone plactin2...    87   4e-16

 psg: 0.00  gvh: 0.00  alm: 0.00  top: 0.00  tms: 0.00  mit: 0.00  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	100.0 %: 

>> prediction for AFM734 is 

>AFM734Z.Seq
XXXXXXXXXXTCAAATTTAGCAGGTAATAGATTAACAGAAGAATATTATAGAATTTTATC
TAGTAAAAATATTACAGTCAATCCAATTAATTTAATTAAAAAAGTAGAGATTAAAACTGG
TGAATTTGGTATTACACCATACAATATACCAACACTCACTGAATCTTATAAAAGATATGT
TACATTAGAAACTATTAGAGATTTAAAAGAAACTTCTTGTAGAGTTTCTGATACAAAGGA
TTTAGGTGAAGATATAAATATAGCACAAGTACCATATGAATTGCCAGATGGTAATTTATT
AGAGATTGGTTCAGATAGATTTCAAATTCCTGAATTATTATTTAATCCAACACCATTGAA
TGAACAAATTTTAAATAACAATAATAATAATAGCAATGGTGAGAATACAACAACATCATC
AGTTGTTCAACAACCACAATATCAAGGATTAGGAAGAATGATTATAGAATCATTAGAGAA
AAGTGATACAGATATTCGTAAAGAATTAATAAGTAATTTAATTATAACTGGTGGTAATAC
ATTATTTGCAGGTTTCCAAGAAAGATTAGTTAGAGACATTTCTGAAATCTCTTATAATAA
ACCAAAAATCGTTGCAAATCAAACTGAAAAAAAAGAATTCAGTTTGGATTGGTGGTT