AFM691
Library AF
(Link to library)
Clone ID AFM691
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig -
Original site URL
Representative seq. ID AFM691P
(Link to Original site)
Representative DNA sequence
>AFM691 (AFM691Q) /CSM/AF/AFM6-D/AFM691Q.Seq.d/
AATAATAATAATAATAACAATAATAATAATAATAATAATAATAATAATAATAATAATAAT
AGTGGTTCAACATCACCAACAGATATTGCAAATGAAAGACAAATCAATGTACATAGAACA
GATGTTCAATTAGCATCATCAGCAATTTTACAGAATATAACAGAATTTAGATTTGAAAAA
GGTGAAATTAATCCAAACCAAGTGAAGATCGTTAATGAAGGTATAGTTGATTTAATTCTA
ATACCAAGATCCAAGAGTACAGATAAAAGAGTTCAATTCTTAACAACACTCACTATTGCA
AACTTATCAATGAATGATGAAAATCATACAGCACTTACAAAATCAAAAGCATTTGATGTG
GTTGAAGCATTTGTAACTTCAAATTCTTTACATATGGATTTAGTTTGTCATTGGATAACT
TTACAACCTCATATACCTTTATTACATTCAAAATATCATCAAGTTCAATTATTTGCATTA
TATTGTCTATATAATTTAATAAGGAATGAACAATATAAAGTTGAAGTTTGGAAAGGATTA
AGTGTAAATAATGGTGTACAAAGTATTTTCATTTTATTACATTCAATGCATCCAAAXXXX
XXXXXXCAAAAAAGATAGCAGATCAATTACAGATTGAAGAACCATCAGTCACTGTGAATA
CAACAAAGATTGGTACAGATTTGAAAAAGTTATTTAATAATCAAGAATATTCAGATGTTA
TATTCACATGTGAAGGAAAGAAATTGTATGCACATAAAGCGATTTGTGCATCGAGATGCG
AACAATTGAGAGCAATGTTCACTTGGGGTAAGGAATCAAAAGAACAAGATATCAATCTAC
CACATACACCCTACTGTGCGATGTATGGTGTGTTAGAGTACATCTATTGTGGTCAAGCTA
CTATCACTTGGGAGAATGCATGTGATCTATTGCAATGGGCTGATTTCTTTTCTTTGGCTG
GTTTAAAAAGTAGTTGTGAATTTTATTTATGGCATTATATTGATTTAGAGAATGCTCCTA
TCATTTTGACTGTAGCTGATCGTTATCGTTGTACTCAATTAAGAAATGTAGCCGCTAACT
TTGTTCTTAGAAATTGGGATAAAATTAAAGATTCTGACGTTTGGATAAATCAAGTCACTG
TTGATGTTAAAAATTATATCTCTGAAAGAATTTATTCTTTAATAACTTGTTCTTGTGGTT
GTATTTGTAGTTGTGTTGATGATGCTAAAAATAATAATGCAAATTCTCCTTCTCAAANTG
NTNATAAAAANNAAATCATATTAANNAAAAANAATAACAAAATCA
sequence update 2009. 4. 3
Translated Amino Acid sequence
NNNNNNNNNNNNNNNNNNNNSGSTSPTDIANERQINVHRTDVQLASSAILQNITEFRFEK
GEINPNQVKIVNEGIVDLILIPRSKSTDKRVQFLTTLTIANLSMNDENHTALTKSKAFDV
VEAFVTSNSLHMDLVCHWITLQPHIPLLHSKYHQVQLFALYCLYNLIRNEQYKVEVWKGL
SVNNGVQSIFILLHSMHP---

---KKIADQLQIEEPSVTVNTTKIGTDLKKLFNNQEYSDVIFTCEGKKLYAHKAICASRC
EQLRAMFTWGKESKEQDINLPHTPYCAMYGVLEYIYCGQATITWENACDLLQWADFFSLA
GLKSSCEFYLWHYIDLENAPIILTVADRYRCTQLRNVAANFVLRNWDKIKDSDVWINQVT
VDVKNYISERIYSLITCSCGCICSCVDDAKNNNANSPSQXXXKXXIILXKXNNKI


Translated Amino Acid sequence (All Frames)
Frame A:
NNNNNNNNNNNNNNNNNNNNSGSTSPTDIANERQINVHRTDVQLASSAILQNITEFRFEK
GEINPNQVKIVNEGIVDLILIPRSKSTDKRVQFLTTLTIANLSMNDENHTALTKSKAFDV
VEAFVTSNSLHMDLVCHWITLQPHIPLLHSKYHQVQLFALYCLYNLIRNEQYKVEVWKGL
SVNNGVQSIFILLHSMHP---

---qkr*qinyrlknhqsl*iqqrlvqi*ksyliikniqmlyshvkerncmhikrfvhrd
ann*eqcslgvrnqknkisiyhihptvrcmvc*stsivvkllslgrmhviycnglisflw
lv*kvvvnfiygiili*rmllsf*l*livivvln*em*pltlfleigiklkiltfg*iks
llmlkiislkefil**lvlvvvfvvvlmmlkiimqilllkxxikxksy*xkxitks

Frame B:
iiiiitiiiiiiiiiiiiiivvqhhqqilqmkdksmyieqmfn*hhqqfyri*qnldlkk
vkliqtk*rslmkv*li*f*yqdprvqikefns*qhsllqtyq*mmkiiqhlqnqkhlmw
lkhl*lqilyiwi*fvig*lynliylyyiqniikfnylhyivyii**gmnniklkfgkd*
v*imvykvfsfyyiqciq---

---kkdsrsitd*rtishceynkdwyrfekvi**srifrcyihm*rkeivct*sdlciem
rtiesnvhlg*gikrtryqsttytllcdvwcvrvhllwssyyhlgecm*siamg*flffg
wfkk*l*ilfmaly*frecsyhfdcs*slslysikkcsr*lcs*klg*n*rf*rldkssh
c*c*klyl*knlffnnlflwlyl*lc**c*k**ckfsfsxxx*kxnhixxkx*qn

Frame C:
*****q**************wfnitnryck*ktnqct*nrcsisiisnfteynri*i*kr
*n*skpsedr**rys*fnsntkiqeyr*kssilnnthyckline**ksystykiksi*cg
*sicnfkfftygfslsldnfttsytfitfkissssiiciilsi*fnke*ti*s*slerik
ck*wctkyfhfitfnask---

---KKIADQLQIEEPSVTVNTTKIGTDLKKLFNNQEYSDVIFTCEGKKLYAHKAICASRC
EQLRAMFTWGKESKEQDINLPHTPYCAMYGVLEYIYCGQATITWENACDLLQWADFFSLA
GLKSSCEFYLWHYIDLENAPIILTVADRYRCTQLRNVAANFVLRNWDKIKDSDVWINQVT
VDVKNYISERIYSLITCSCGCICSCVDDAKNNNANSPSQXXXKXXIILXKXNNKI

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AFM691 (AFM691Q) /CSM/AF/AFM6-D/AFM691Q.Seq.d/ 2335 0.0
CHQ546 (CHQ546Q) /CSM/CH/CHQ5-B/CHQ546Q.Seq.d/ 1291 0.0
SFL208 (SFL208Q) /CSM/SF/SFL2-A/SFL208Q.Seq.d/ 1283 0.0
CHH877 (CHH877Q) /CSM/CH/CHH8-D/CHH877Q.Seq.d/ 1164 0.0
CHF822 (CHF822Q) /CSM/CH/CHF8-A/CHF822Q.Seq.d/ 1154 0.0
SLG557 (SLG557Q) /CSM/SL/SLG5-C/SLG557Q.Seq.d/ 981 0.0
SFI714 (SFI714Q) /CSM/SF/SFI7-A/SFI714Q.Seq.d/ 42 0.021
AFO391 (AFO391Q) /CSM/AF/AFO3-D/AFO391Q.Seq.d/ 42 0.021
VFF752 (VFF752Q) /CSM/VF/VFF7-C/VFF752Q.Seq.d/ 38 0.33
SLJ223 (SLJ223Q) /CSM/SL/SLJ2-A/SLJ223Q.Seq.d/ 38 0.33

own update 2009. 4. 3
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

(BJ347333) Dictyostelium discoideum cDNA clone:dda26e24, 3' ... 1338 0.0 1
(BJ385567) Dictyostelium discoideum cDNA clone:ddc55k11, 3' ... 1291 0.0 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 1287 0.0 2
(BJ401423) Dictyostelium discoideum cDNA clone:dds23o02, 3' ... 1283 0.0 1
(BJ380345) Dictyostelium discoideum cDNA clone:ddc37j20, 3' ... 1164 0.0 1
(BJ378889) Dictyostelium discoideum cDNA clone:ddc33l06, 3' ... 1154 0.0 2
(AU061906) Dictyostelium discoideum slug cDNA, clone SLG557. 981 0.0 2
(BJ329936) Dictyostelium discoideum cDNA clone:dda26e24, 5' ... 1061 0.0 1
(BJ390644) Dictyostelium discoideum cDNA clone:dds23o02, 5' ... 914 0.0 2
(EL571418) Physarum13624 Physarum polycephalum starvation st... 38 0.70 2
dna update 2009. 4.13
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

AC116963_61(AC116963|pid:none) Dictyostelium discoideum chromoso... 114 6e-24
AY074524_1(AY074524|pid:none) Arabidopsis thaliana unknown prote... 89 3e-16
FJ422582_1(FJ422582|pid:none) Arabidopsis thaliana ABAP1 (ABAP1)... 89 3e-16
AC132492_6(AC132492|pid:none) Oryza sativa (japonica cultivar-gr... 84 1e-14
DQ507278_1(DQ507278|pid:none) Drosophila melanogaster roadkill i... 84 1e-14
CR848583_1(CR848583|pid:none) Xenopus tropicalis finished cDNA, ... 83 2e-14
BC155387_1(BC155387|pid:none) Xenopus tropicalis regulator of ch... 83 2e-14
AK317640_1(AK317640|pid:none) Arabidopsis thaliana AT5G19330 mRN... 83 2e-14
AE014297_1843(AE014297|pid:none) Drosophila melanogaster chromos... 81 7e-14
CP001159_136(CP001159|pid:none) Thalassiosira pseudonana CCMP133... 81 7e-14
protein update 2009. 4. 6
PSORT

psg: 0.00 gvh: 0.00 alm: 0.00 top: 0.00 tms: 0.00 mit: 0.00 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

100.0 %:

>> prediction for AFM691 is

5' end seq. ID AFM691F
5' end seq.
>AFM691F.Seq
AATAATAATAATAATAACAATAATAATAATAATAATAATAATAATAATAATAATAATAAT
AGTGGTTCAACATCACCAACAGATATTGCAAATGAAAGACAAATCAATGTACATAGAACA
GATGTTCAATTAGCATCATCAGCAATTTTACAGAATATAACAGAATTTAGATTTGAAAAA
GGTGAAATTAATCCAAACCAAGTGAAGATCGTTAATGAAGGTATAGTTGATTTAATTCTA
ATACCAAGATCCAAGAGTACAGATAAAAGAGTTCAATTCTTAACAACACTCACTATTGCA
AACTTATCAATGAATGATGAAAATCATACAGCACTTACAAAATCAAAAGCATTTGATGTG
GTTGAAGCATTTGTAACTTCAAATTCTTTACATATGGATTTAGTTTGTCATTGGATAACT
TTACAACCTCATATACCTTTATTACATTCAAAATATCATCAAGTTCAATTATTTGCATTA
TATTGTCTATATAATTTAATAAGGAATGAACAATATAAAGTTGAAGTTTGGAAAGGATTA
AGTGTAAATAATGGTGTACAAAGTATTTTCATTTTATTACATTCAATGCATCCAAAXXXX
XXXXXX
Length of 5' end seq. 606
3' end seq. ID AFM691Z
3' end seq.
>AFM691Z.Seq
XXXXXXXXXXCAAAAAAGATAGCAGATCAATTACAGATTGAAGAACCATCAGTCACTGTG
AATACAACAAAGATTGGTACAGATTTGAAAAAGTTATTTAATAATCAAGAATATTCAGAT
GTTATATTCACATGTGAAGGAAAGAAATTGTATGCACATAAAGCGATTTGTGCATCGAGA
TGCGAACAATTGAGAGCAATGTTCACTTGGGGTAAGGAATCAAAAGAACAAGATATCAAT
CTACCACATACACCCTACTGTGCGATGTATGGTGTGTTAGAGTACATCTATTGTGGTCAA
GCTACTATCACTTGGGAGAATGCATGTGATCTATTGCAATGGGCTGATTTCTTTTCTTTG
GCTGGTTTAAAAAGTAGTTGTGAATTTTATTTATGGCATTATATTGATTTAGAGAATGCT
CCTATCATTTTGACTGTAGCTGATCGTTATCGTTGTACTCAATTAAGAAATGTAGCCGCT
AACTTTGTTCTTAGAAATTGGGATAAAATTAAAGATTCTGACGTTTGGATAAATCAAGTC
ACTGTTGATGTTAAAAATTATATCTCTGAAAGAATTTATTCTTTAATAACTTGTTCTTGT
GGTTGTATTTGTAGTTGTGTTGATGATGCTAAAAATAATAATGCAAATTCTCCTTCTCAA
ANTGNTNATAAAAANNAAATCATATTAANNAAAAANAATAACAAAATCA
Length of 3' end seq. 709
Connected seq. ID AFM691P
Connected seq.
>AFM691P.Seq
AATAATAATAATAATAACAATAATAATAATAATAATAATAATAATAATAATAATAATAAT
AGTGGTTCAACATCACCAACAGATATTGCAAATGAAAGACAAATCAATGTACATAGAACA
GATGTTCAATTAGCATCATCAGCAATTTTACAGAATATAACAGAATTTAGATTTGAAAAA
GGTGAAATTAATCCAAACCAAGTGAAGATCGTTAATGAAGGTATAGTTGATTTAATTCTA
ATACCAAGATCCAAGAGTACAGATAAAAGAGTTCAATTCTTAACAACACTCACTATTGCA
AACTTATCAATGAATGATGAAAATCATACAGCACTTACAAAATCAAAAGCATTTGATGTG
GTTGAAGCATTTGTAACTTCAAATTCTTTACATATGGATTTAGTTTGTCATTGGATAACT
TTACAACCTCATATACCTTTATTACATTCAAAATATCATCAAGTTCAATTATTTGCATTA
TATTGTCTATATAATTTAATAAGGAATGAACAATATAAAGTTGAAGTTTGGAAAGGATTA
AGTGTAAATAATGGTGTACAAAGTATTTTCATTTTATTACATTCAATGCATCCAAA----
------CAAAAAAGATAGCAGATCAATTACAGATTGAAGAACCATCAGTCACTGTGAATA
CAACAAAGATTGGTACAGATTTGAAAAAGTTATTTAATAATCAAGAATATTCAGATGTTA
TATTCACATGTGAAGGAAAGAAATTGTATGCACATAAAGCGATTTGTGCATCGAGATGCG
AACAATTGAGAGCAATGTTCACTTGGGGTAAGGAATCAAAAGAACAAGATATCAATCTAC
CACATACACCCTACTGTGCGATGTATGGTGTGTTAGAGTACATCTATTGTGGTCAAGCTA
CTATCACTTGGGAGAATGCATGTGATCTATTGCAATGGGCTGATTTCTTTTCTTTGGCTG
GTTTAAAAAGTAGTTGTGAATTTTATTTATGGCATTATATTGATTTAGAGAATGCTCCTA
TCATTTTGACTGTAGCTGATCGTTATCGTTGTACTCAATTAAGAAATGTAGCCGCTAACT
TTGTTCTTAGAAATTGGGATAAAATTAAAGATTCTGACGTTTGGATAAATCAAGTCACTG
TTGATGTTAAAAATTATATCTCTGAAAGAATTTATTCTTTAATAACTTGTTCTTGTGGTT
GTATTTGTAGTTGTGTTGATGATGCTAAAAATAATAATGCAAATTCTCCTTCTCAAANTG
NTNATAAAAANNAAATCATATTAANNAAAAANAATAACAAAATCA
Length of connected seq. 1295
Full length Seq ID -
Full length Seq. -
Length of full length seq. -