>VFI196 (VFI196Q) /CSM/VF/VFI1-D/VFI196Q.Seq.d/
XXXXXXXXXXCANCAACAACAACAACAACAACAACAACAACAACCAAAACTATCACCACC
TTCTATGACCTCTTCCCCATCACAATATCAATACCAACAGCCACAACAGCAAAGACAACA
GCCACAACAACAGCAACAATATCAAAGACAACATCAGCCACCATACCA

---XTTTTTTTTTTKTITTFYDLFPITISIPTATTAKTTATTTATISKTTSATIP

Frame A:
---xnnnnnnnnnnqnyhhll*plphhnintnshnskdnshnnsnnikdnishht


Frame B:
---XTTTTTTTTTTKTITTFYDLFPITISIPTATTAKTTATTTATISKTTSATIP


Frame C:
---qqqqqqqqqqpklsppsmtsspsqyqyqqpqqqrqqpqqqqqyqrqhqppy

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFI196 (VFI196Q) /CSM/VF/VFI1-D/VFI196Q.Seq.d/                        103   8e-22
CHH452 (CHH452Q) /CSM/CH/CHH4-C/CHH452Q.Seq.d/                        103   8e-22
AHA101 (AHA101Q) /CSM/AH/AHA1-A/AHA101Q.Seq.d/                        103   8e-22
AHG215 (AHG215Q) /CSM/AH/AHG2-A/AHG215Q.Seq.d/                         98   5e-20
SHA865 (SHA865Q) /CSM/SH/SHA8-C/SHA865Q.Seq.d/                         92   3e-18
VHI783 (VHI783Q) /CSM/VH/VHI7-D/VHI783Q.Seq.d/                         30   9.5
VFC531 (VFC531Q) /CSM/VF/VFC5-B/VFC531Q.Seq.d/                         30   9.5
VFA375 (VFA375Q) /CSM/VF/VFA3-D/VFA375Q.Seq.d/                         30   9.5
SLC512 (SLC512Q) /CSM/SL/SLC5-A/SLC512Q.Seq.d/                         30   9.5
SLB312 (SLB312Q) /CSM/SL/SLB3-A/SLB312Q.Seq.d/                         30   9.5

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC101792|AC101792.2 Mus musculus clone RP24-176G22, WORKING DRAFT SEQUENCE, 20 unordered pieces.    42   2.2    1
AC124583|AC124583.3 Mus musculus chromosome UNK clone RP23-123P18, WORKING DRAFT SEQUENCE, 4 unordered pieces.    42   2.2    1
AC146140|AC146140.1 Pan troglodytes chromosome UNK clone RP43-2M6, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.    40   8.8    1
CK407044|CK407044.1 AUF_IfLvr_212_p04 Ictalurus furcatus liver cDNA library Ictalurus furcatus cDNA 5' similar to glucose-6-phosphatase, mRNA sequence.    40   8.8    1
AC141850|AC141850.2 Papio anubis clone RP41-329O9, WORKING DRAFT SEQUENCE, 4 ordered pieces.    40   8.8    1
AC073873|AC073873.7 Homo sapiens BAC clone RP11-575M4 from 7, complete sequence.    40   8.8    1
AC147271|AC147271.1 Pan troglodytes chromosome UNK clone RP43-121F15, *** SEQUENCING IN PROGRESS ***, 24 unordered pieces.    40   8.8    1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 41,304,088

 psg: 0.79  gvh: 0.48  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.39  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 36.0 %: mitochondrial
	 16.0 %: cytoplasmic
	  4.0 %: cytoskeletal

>> prediction for VFI196 is nuc

>VFI196Z.Seq
NNNNNNNNNNCANCAACAACAACAACAACAACAACAACAACAACCAAAACTATCACCACC
TTCTATGACCTCTTCCCCATCACAATATCAATACCAACAGCCACAACAGCAAAGACAACA
GCCACAACAACAGCAACAATATCAAAGACAACATCAGCCACCATACCA