>VFI190 (VFI190Q) /CSM/VF/VFI1-D/VFI190Q.Seq.d/
ATTTTTTTTTTTAAAGTTTTACATATNTATAAACAATCAATTTAAAAAATGATGAAATTT
TTAATTGTTTTAATTTTAGCATTATTCGCTTTATCAAGNGTTAATGCAAGCAGCGCTATT
GAATGCGAACTTTGNGAATATGCTGCCAATTATGGNGAATTGCTCATTCAATCAAATGCC
ACCGAAACTGAAATTATCGATAAAGTTGAAAACTTTTGCAAAGTTATCCCATCTAGTTTC
CAAGCCACTTGNGATAGTTTAATCGCAAACTATGGTAAACAACTCATTCAAATGATTGTC
AACAAAGAATCACCAAGCACTTTGNGCGCTCAAATTGATATGTGTGCATCATCAACTGAA
GCCGTCCAAGGTATTTTANAATGTGACATTTGCCAATTCATCGTTAAACAAGTCAACAAA
TATATTTCAGGTAACGCAACTGAAGCCCAAATCCTCAAATTCTTAGATACTGATTGTGAA
GTCTTTGGTAAAGGTGGTTCGGTAACTTGTCAAXXXXXXXXXX

ifffkvlhxykqsi*KMMKFLIVLILALFALSXVNASSAIECELXEYAANYGELLIQSNA
TETEIIDKVENFCKVIPSSFQATXDSLIANYGKQLIQMIVNKESPSTLXAQIDMCASSTE
AVQGILXCDICQFIVKQVNKYISGNATEAQILKFLDTDCEVFGKGGSVTC---

Frame A:
ifffkvlhxykqsi*KMMKFLIVLILALFALSXVNASSAIECELXEYAANYGELLIQSNA
TETEIIDKVENFCKVIPSSFQATXDSLIANYGKQLIQMIVNKESPSTLXAQIDMCASSTE
AVQGILXCDICQFIVKQVNKYISGNATEAQILKFLDTDCEVFGKGGSVTC---


Frame B:
ffflkfyixinnqfkk**nf*lf*f*hyslyqxlmqaallnanfxnmlpimxncsfnqmp
pklklsiklktfaklshlvskplxiv*sqtmvnnsfk*lstknhqalxalklicvhhqlk
pskvfxnvtfansslnkstnifqvtqlkpkssns*ilivkslvkvvr*lv---


Frame C:
fff*sftyx*tinlkndeifncfnfsiirfikx*ckqry*mrtlxiccqlwxiahsikch
rn*nyr*s*kllqsypi*fpshlx*fnrklw*tthsndcqqritkhfxrsn*yvciin*s
rpryfxm*hlpihr*tsqqiyfr*rn*spnpqilry*l*slw*rwfgnls---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFI190 (VFI190Q) /CSM/VF/VFI1-D/VFI190Q.Seq.d/                        952   0.0
VFO870 (VFO870Q) /CSM/VF/VFO8-C/VFO870Q.Seq.d/                        936   0.0
VFL608 (VFL608Q) /CSM/VF/VFL6-A/VFL608Q.Seq.d/                        936   0.0
VFL571 (VFL571Q) /CSM/VF/VFL5-C/VFL571Q.Seq.d/                        936   0.0
VFF888 (VFF888Q) /CSM/VF/VFF8-D/VFF888Q.Seq.d/                        936   0.0
VFF843 (VFF843Q) /CSM/VF/VFF8-B/VFF843Q.Seq.d/                        936   0.0
VFF267 (VFF267Q) /CSM/VF/VFF2-C/VFF267Q.Seq.d/                        936   0.0
VFN547 (VFN547Q) /CSM/VF/VFN5-B/VFN547Q.Seq.d/                        930   0.0
VFG332 (VFG332Q) /CSM/VF/VFG3-B/VFG332Q.Seq.d/                        928   0.0
VFF621 (VFF621Q) /CSM/VF/VFF6-A/VFF621Q.Seq.d/                        920   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AU206530|AU206530.1 Caenorhabditis elegans cDNA clone:yk877f01 : 5' end, single read.   212   4e-51  1
AF175768|AF175768.1 Dictyostelium discoideum SAPLIP C protein mRNA, complete cds.    78   2e-11  2
AY379774|AY379774.1 Medicago truncatula chromosome 5 clone MtH1-015B03 strain Jemalong A17, WORKING DRAFT SEQUENCE, 27 unordered pieces.    52   0.001  3
AC019292|AC019292.10 Homo sapiens, clone RP11-23J14, complete sequence.    44   0.005  6
AC129358|AC129358.4 Rattus norvegicus clone CH230-387H5, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    44   0.006  4
AC025855|AC025855.3 Homo sapiens chromosome 8 clone RP11-392L24 map 8, LOW-PASS SEQUENCE SAMPLING.    40   0.016  2
AC010838|AC010838.11 Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACR13D24, complete sequence.    36   0.018  5
AE001438|AE001438.3 Clostridium acetobutylicum megaplasmid pSOL1, complete sequence.    50   0.031  1
AX360265|AX360265.1 Sequence 18 from Patent WO0204489.             42   0.032  4
AX360264|AX360264.1 Sequence 17 from Patent WO0204489.             42   0.032  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66367_1(U66367|pid:none) Dictyostelium discoideum SapA (sapA) m...    75   1e-12
BT045327_1(BT045327|pid:none) Salmo salar clone ssal-rgf-518-210...    72   8e-12
BT045905_1(BT045905|pid:none) Salmo salar clone ssal-rgf-536-147...    72   8e-12
BT058972_1(BT058972|pid:none) Salmo salar clone ssal-rgf-517-167...    72   8e-12
CR388420_1(CR388420|pid:none) Zebrafish DNA sequence from clone ...    69   5e-11
AF108656_1(AF108656|pid:none) Gallus gallus prosaposin mRNA, com...    69   5e-11
BC056717_1(BC056717|pid:none) Danio rerio prosaposin, mRNA (cDNA...    69   5e-11
(O13035) RecName: Full=Proactivator polypeptide; Contains:   Rec...    69   5e-11
AF276996_1(AF276996|pid:none) Danio rerio lysosomal cofactor/neu...    69   5e-11
AB209776_1(AB209776|pid:none) Homo sapiens mRNA for prosaposin v...    65   1e-09

 psg: 0.99  gvh: 0.88  alm: 0.42  top: 0.07  tms: 0.00  mit: 0.34  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: extracellular, including cell wall
	 12.0 %: cytoplasmic
	 12.0 %: endoplasmic reticulum
	  8.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: nuclear

>> prediction for VFI190 is exc

>VFI190F.Seq
ATTTTTTTTTTTAAAGTTTTACATATNTATAAACAATCAATTTAAAAAATGATGAAATTT
TTAATTGTTTTAATTTTAGCATTATTCGCTTTATCAAGNGTTAATGCAAGCAGCGCTATT
GAATGCGAACTTTGNGAATATGCTGCCAATTATGGNGAATTGCTCATTCAATCAAATGCC
ACCGAAACTGAAATTATCGATAAAGTTGAAAACTTTTGCAAAGTTATCCCATCTAGTTTC
CAAGCCACTTGNGATAGTTTAATCGCAAACTATGGTAAACAACTCATTCAAATGATTGTC
AACAAAGAATCACCAAGCACTTTGNGCGCTCAAATTGATATGTGTGCATCATCAACTGAA
GCCGTCCAAGGTATTTTANAATGTGACATTTGCCAATTCATCGTTAAACAAGTCAACAAA
TATATTTCAGGTAACGCAACTGAAGCCCAAATCCTCAAATTCTTAGATACTGATTGTGAA
GTCTTTGGTAAAGGTGGTTCGGTAACTTGTCAANNNNNNNNNN