>VFI179 (VFI179Q) /CSM/VF/VFI1-D/VFI179Q.Seq.d/
XXXXXXXXXXTAAATTTAAATGGTCAGTCATTGACAGATGGCAAGATCATAAAGGTTTCA
TTGATGCAACTATTCATAAAATTAAAAAAGCATATAATCAATTTAATAGTAAATTAAGGG
AATTGGATATTGATGATGTTGATGCTAATAATAATAATAATAATAAGCCAGTACTAGTAT
TTTCAGCACACTCATTACCAATGTCGACTGTTGAAAAAGGTGATCCATATCCACAGGAAG
TCGCAGAGACAGTTTGTAGAGTTATGGATGGTTTGGGCATTAGGGATGAAGAGACTGGTA
AACCATTGGAATATATTTTAGCATGGCAAAGTAAAGTTGGACCCTTGCCTTGGTTATCAC
CAAAAACAAGTTTTGTAATTGAACAATTGGCAAAGAAAGGTCGTAATGCAATTGTGATCC
CAATTGCATTCACTTCTGATCATATTGAAACTTTATCAGAAATTGATATTGAATTACAAC
ATCTCGCTAAAAAATGTGGTATGAAATTATTAGTACGTTCTGAATCTTTAAATGATGATC
CTTTAATTATCTCTGCTATGGCTGATTTAGTTAATACTCATTTAAAATCAAATAAAACAA
TTCATTCTAATCAATATCATTTAAAATGTCCTGGT

---KFKWSVIDRWQDHKGFIDATIHKIKKAYNQFNSKLRELDIDDVDANNNNNNKPVLVF
SAHSLPMSTVEKGDPYPQEVAETVCRVMDGLGIRDEETGKPLEYILAWQSKVGPLPWLSP
KTSFVIEQLAKKGRNAIVIPIAFTSDHIETLSEIDIELQHLAKKCGMKLLVRSESLNDDP
LIISAMADLVNTHLKSNKTIHSNQYHLKCPG

Frame A:
---KFKWSVIDRWQDHKGFIDATIHKIKKAYNQFNSKLRELDIDDVDANNNNNNKPVLVF
SAHSLPMSTVEKGDPYPQEVAETVCRVMDGLGIRDEETGKPLEYILAWQSKVGPLPWLSP
KTSFVIEQLAKKGRNAIVIPIAFTSDHIETLSEIDIELQHLAKKCGMKLLVRSESLNDDP
LIISAMADLVNTHLKSNKTIHSNQYHLKCPG


Frame B:
---nlngqsltdgkiikvslmqlfiklkkhiinlivn*gnwilmmlmliiiiiisqy*yf
qhthyqcrllkkvihihrksqrqfvelwmvwalgmkrlvnhwnif*hgkvkldpclgyhq
kqvl*lnnwqrkvvmql*sqlhslliilklyqklilnynislknvv*ny*yvlnl*mmil
*lsllwli*lili*nqikqfilinii*nvl


Frame C:
---i*mvsh*qmars*rfh*cnys*n*ksi*si***ikgigy**c*c*******astsif
stlitnvdc*kr*sistgsrrdsl*sygwfgh*g*rdw*tigiyfsmak*swtlalvitk
nkfcn*tigkers*cncdpncihf*sy*nfirn*y*ittsr*kmwyeiistf*ifk**sf
nylcyg*fs*ysfkik*nnsf*sisfkmsw

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSE471 (VSE471Q) /CSM/VS/VSE4-C/VSE471Q.Seq.d/                        930   0.0
VFI179 (VFI179Q) /CSM/VF/VFI1-D/VFI179Q.Seq.d/                        930   0.0
VFH742 (VFH742Q) /CSM/VF/VFH7-B/VFH742Q.Seq.d/                        906   0.0
VFN150 (VFN150Q) /CSM/VF/VFN1-C/VFN150Q.Seq.d/                        872   0.0
CHQ156 (CHQ156Q) /CSM/CH/CHQ1-C/CHQ156Q.Seq.d/                         38   0.16
VSJ733 (VSJ733Q) /CSM/VS/VSJ7-B/VSJ733Q.Seq.d/                         36   0.63
VSF244 (VSF244Q) /CSM/VS/VSF2-B/VSF244Q.Seq.d/                         36   0.63
VSE804 (VSE804Q) /CSM/VS/VSE8-A/VSE804Q.Seq.d/                         36   0.63
VSD805 (VSD805Q) /CSM/VS/VSD8-A/VSD805Q.Seq.d/                         36   0.63
VHK408 (VHK408Q) /CSM/VH/VHK4-A/VHK408Q.Seq.d/                         36   0.63

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence.    32   3e-05  12
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, complete sequence, section 1/5.    32   2e-04  16
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    38   2e-04  16
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    40   0.001  13
AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence.    34   0.004  10
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    32   0.005  12
AE014121|AE014121.1 Buchnera aphidicola str. Sg (Schizaphis graminum) section 46 of 57 of the complete genome.    36   0.005  5
AC009728|AC009728.14 Homo sapiens 12 BAC RP11-864B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    36   0.014  7
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 map 6245135-6357017 strain AX4, complete sequence.    32   0.051  9
BX572091|BX572091.1 Prochlorococcus marinus MED4 complete genome; segment 2/5.    44   0.054  12

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P22315) RecName: Full=Ferrochelatase, mitochondrial;          E...   179   6e-44
AK004718_1(AK004718|pid:none) Mus musculus adult male lung cDNA,...   179   6e-44
(O57478) RecName: Full=Ferrochelatase, mitochondrial;          E...   177   2e-43
DQ498978_1(DQ498978|pid:none) Mesocricetus auratus sex steroid-d...   175   8e-43
(P22600) RecName: Full=Ferrochelatase, mitochondrial;          E...   175   8e-43
AK092416_1(AK092416|pid:none) Homo sapiens cDNA FLJ35097 fis, cl...   171   2e-41
A36403(A36403;A55316;JQ0727) ferrochelatase (EC 4.99.1.1) precur...   171   2e-41
BT019959_1(BT019959|pid:none) Homo sapiens ferrochelatase (proto...   171   2e-41
AK223190_1(AK223190|pid:none) Homo sapiens mRNA for Hypothetical...   171   2e-41
BX571744_1(BX571744|pid:none) Homo sapiens mRNA; cDNA DKFZp686P1...   171   2e-41

 psg: 0.59  gvh: 0.27  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: extracellular, including cell wall
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for VFI179 is cyt

>VFI179Z.Seq
NNNNNNNNNNTAAATTTAAATGGTCAGTCATTGACAGATGGCAAGATCATAAAGGTTTCA
TTGATGCAACTATTCATAAAATTAAAAAAGCATATAATCAATTTAATAGTAAATTAAGGG
AATTGGATATTGATGATGTTGATGCTAATAATAATAATAATAATAAGCCAGTACTAGTAT
TTTCAGCACACTCATTACCAATGTCGACTGTTGAAAAAGGTGATCCATATCCACAGGAAG
TCGCAGAGACAGTTTGTAGAGTTATGGATGGTTTGGGCATTAGGGATGAAGAGACTGGTA
AACCATTGGAATATATTTTAGCATGGCAAAGTAAAGTTGGACCCTTGCCTTGGTTATCAC
CAAAAACAAGTTTTGTAATTGAACAATTGGCAAAGAAAGGTCGTAATGCAATTGTGATCC
CAATTGCATTCACTTCTGATCATATTGAAACTTTATCAGAAATTGATATTGAATTACAAC
ATCTCGCTAAAAAATGTGGTATGAAATTATTAGTACGTTCTGAATCTTTAAATGATGATC
CTTTAATTATCTCTGCTATGGCTGATTTAGTTAATACTCATTTAAAATCAAATAAAACAA
TTCATTCTAATCAATATCATTTAAAATGTCCTGGT