>VFG549 (VFG549Q) /CSM/VF/VFG5-C/VFG549Q.Seq.d/
XXXXXXXXXXAAAAATATTTAGGTTCAGCATTAGATTCTCAAACTGTAAAGACATTCCTC
CAAAATGAATGTAACAAACTTCCAGGTGTTGTTGGTGATGTTTGTAATGAAGTTGTAAAT
GAATATCTTGAATTTGCAGTCACTCAACTCGAAGCTAAATTTAACCCAACTGAAATTTGT
CAATTATTTTCATTCTGTACTGCTGGATCTGAATCATCAGATGCATCTGAAATCAAAATT
AATAACAACTCATATATTGATTGTCAAATTTGTGAAGTTTTAGCAAATTTCGTAGTCTAT
GATAAGAATTATACAACTCATTTCGAAGATAAACTCAATAAATTATGTAGTTGTTTATCT
CGTAGTTTAATTGAACCATGTCTTAACTTTGTTTCACAATATGGTTCTGATCTTGTACAA
ATCATC

---KYLGSALDSQTVKTFLQNECNKLPGVVGDVCNEVVNEYLEFAVTQLEAKFNPTEICQ
LFSFCTAGSESSDASEIKINNNSYIDCQICEVLANFVVYDKNYTTHFEDKLNKLCSCLSR
SLIEPCLNFVSQYGSDLVQII

Frame A:
---kifrfsirfsnckdippk*m*qtsrccw*cl**sck*is*icshstrs*i*pn*nls
iifilycwi*iirci*nqn**qliy*lsnl*sfskfrsl**elynsfrr*tq*im*lfis
*fn*tms*lcftiwf*sctnh


Frame B:
---KYLGSALDSQTVKTFLQNECNKLPGVVGDVCNEVVNEYLEFAVTQLEAKFNPTEICQ
LFSFCTAGSESSDASEIKINNNSYIDCQICEVLANFVVYDKNYTTHFEDKLNKLCSCLSR
SLIEPCLNFVSQYGSDLVQII


Frame C:
---ni*vqh*ilkl*rhsskmnvtnfqvllvmfvmkl*mnilnlqslnsklnltqlkfvn
yfhsvlldlnhqmhlksklitthilivkfvkf*qis*smiriiqliskinsinyvvvylv
v*lnhvltlfhnmvlilyks

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFN623 (VFN623Q) /CSM/VF/VFN6-A/VFN623Q.Seq.d/                        825   0.0
VFM205 (VFM205Q) /CSM/VF/VFM2-A/VFM205Q.Seq.d/                        825   0.0
VFJ635 (VFJ635Q) /CSM/VF/VFJ6-B/VFJ635Q.Seq.d/                        825   0.0
VFG549 (VFG549Q) /CSM/VF/VFG5-C/VFG549Q.Seq.d/                        825   0.0
VFE307 (VFE307Q) /CSM/VF/VFE3-A/VFE307Q.Seq.d/                        825   0.0
VFB595 (VFB595Q) /CSM/VF/VFB5-D/VFB595Q.Seq.d/                        825   0.0
VFA464 (VFA464Q) /CSM/VF/VFA4-C/VFA464Q.Seq.d/                        825   0.0
VFL348 (VFL348Q) /CSM/VF/VFL3-B/VFL348Q.Seq.d/                        817   0.0
SSD712 (SSD712Q) /CSM/SS/SSD7-A/SSD712Q.Seq.d/                        811   0.0
VFD617 (VFD617Q) /CSM/VF/VFD6-A/VFD617Q.Seq.d/                        805   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U66367|U66367.1 Dictyostelium discoideum SapA (sapA) mRNA, partial cds.   817   0.0    1
AR300198|AR300198.1 Sequence 1 from patent US 6537773.             36   0.001  15
AC010477|AC010477.8 Homo sapiens chromosome 5 clone CTD-2313D3, complete sequence.    42   0.042  6
AC121235|AC121235.16 Medicago truncatula clone mth2-21k24, WORKING DRAFT SEQUENCE, 2 ordered pieces.    36   0.075  4
AC132078|AC132078.2 Canis familiaris clone RP81-406J22, WORKING DRAFT SEQUENCE, 9 ordered pieces.    36   0.18   6
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    34   0.20   6
BX649552|BX649552.3 Zebrafish DNA sequence from clone CH211-91I13 in linkage group 18.    34   0.31   6
AC114964|AC114964.2 Homo sapiens chromosome 5 clone RP11-275B7, complete sequence.    42   0.33   5
AC009465|AC009465.7 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete sequence.    46   0.40   1
AC137078|AC137078.20 Medicago truncatula clone mth2-10e12, WORKING DRAFT SEQUENCE.    40   0.69   8

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66367_1(U66367|pid:none) Dictyostelium discoideum SapA (sapA) m...   281   4e-75
AK223290_1(AK223290|pid:none) Homo sapiens mRNA for prosaposin (...    61   1e-08
(Q6IBQ6) RecName: Full=Proactivator polypeptide; Contains:   Rec...    61   1e-08
AY892719_1(AY892719|pid:none) Synthetic construct Homo sapiens c...    61   1e-08
BC054988_1(BC054988|pid:none) Xenopus laevis hypothetical protei...    60   2e-08
CR456746_1(CR456746|pid:none) Homo sapiens full open reading fra...    60   2e-08
DQ062781_1(DQ062781|pid:none) Drosophila simulans saposin-relate...    59   7e-08
AK299184_1(AK299184|pid:none) Homo sapiens cDNA FLJ54136 complet...    58   9e-08
AB209776_1(AB209776|pid:none) Homo sapiens mRNA for prosaposin v...    57   2e-07
CR861454_1(CR861454|pid:none) Pongo abelii mRNA; cDNA DKFZp459G1...    57   2e-07

 psg: 0.75  gvh: 0.35  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 44.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for VFG549 is cyt

>VFG549Z.Seq
----------AAAAATATTTAGGTTCAGCATTAGATTCTCAAACTGTAAAGACATTCCTC
CAAAATGAATGTAACAAACTTCCAGGTGTTGTTGGTGATGTTTGTAATGAAGTTGTAAAT
GAATATCTTGAATTTGCAGTCACTCAACTCGAAGCTAAATTTAACCCAACTGAAATTTGT
CAATTATTTTCATTCTGTACTGCTGGATCTGAATCATCAGATGCATCTGAAATCAAAATT
AATAACAACTCATATATTGATTGTCAAATTTGTGAAGTTTTAGCAAATTTCGTAGTCTAT
GATAAGAATTATACAACTCATTTCGAAGATAAACTCAATAAATTATGTAGTTGTTTATCT
CGTAGTTTAATTGAACCATGTCTTAACTTTGTTTCACAATATGGTTCTGATCTTGTACAA
ATCATC