>VFG409 (VFG409Q) /CSM/VF/VFG4-A/VFG409Q.Seq.d/
XXXXXXXXXXTTCCAGGGTGCCCTTAAAACTGATACCATTGTTTTTGATTCTGTCAATGG
ATGGCAACAAGTCGATGTAGTAGGTGCATCACCAACCCCAAGAGCTCATCATCATTTACA
CTATAATGAAGAATTAGATTCAATTTTCACCTATGGCGGCTATACCAATTGTAGTACCTA
CACCACCAATGAATGTAATTATCTTGGCGATTTATGGAGTCTTGATTTATCAACAAAAGT
TTGGAAGCAACATCTCTTTGATGTAACCAAAGGACCAGGAAATAGAGATAATGCCAAATT
CATTTATTCCGATCAAAATCAACTTTTCTTAATTGGTGGAAGTAATTATCAATACACCAA
CTTTATGGATGTATGGCGTTTTGATTTAATTACAAATGAATGGACTCAATTAACCATTTT
ACCATTAGTTGATCCAGAAACTTATATTCAAACTCCAATTCCAAGTAC

---QGALKTDTIVFDSVNGWQQVDVVGASPTPRAHHHLHYNEELDSIFTYGGYTNCSTYT
TNECNYLGDLWSLDLSTKVWKQHLFDVTKGPGNRDNAKFIYSDQNQLFLIGGSNYQYTNF
MDVWRFDLITNEWTQLTILPLVDPETYIQTPIPS

Frame A:
---srvplkliplflilsmdgnksm**vhhqpqeliiiytimkn*iqfspmaaipivvpt
ppmnviilaiygvliyqqkfgsnislm*pkdqeieimpnsfipikinfs*lveviintpt
lwmygvli*lqmngln*pfyh*liqklifklqfqv


Frame B:
---pgcp*n*yhcf*fcqwmatsrcsrcitnpkssssftl**rirfnfhlwrlyql*ylh
hq*m*lswrfmes*finksleatsl*cnqrtrk*r*cqihlfrskstflnwwk*lsihql
ygcmaf*fnyk*mdsinhftis*srnlysnsnsky


Frame C:
---QGALKTDTIVFDSVNGWQQVDVVGASPTPRAHHHLHYNEELDSIFTYGGYTNCSTYT
TNECNYLGDLWSLDLSTKVWKQHLFDVTKGPGNRDNAKFIYSDQNQLFLIGGSNYQYTNF
MDVWRFDLITNEWTQLTILPLVDPETYIQTPIPS

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFG409 (VFG409Q) /CSM/VF/VFG4-A/VFG409Q.Seq.d/                        908   0.0
VSG116 (VSG116Q) /CSM/VS/VSG1-A/VSG116Q.Seq.d/                        896   0.0
VFO833 (VFO833Q) /CSM/VF/VFO8-B/VFO833Q.Seq.d/                        896   0.0
VFK331 (VFK331Q) /CSM/VF/VFK3-B/VFK331Q.Seq.d/                        896   0.0
VFJ823 (VFJ823Q) /CSM/VF/VFJ8-A/VFJ823Q.Seq.d/                        896   0.0
VFJ254 (VFJ254Q) /CSM/VF/VFJ2-C/VFJ254Q.Seq.d/                        896   0.0
VFI613 (VFI613Q) /CSM/VF/VFI6-A/VFI613Q.Seq.d/                        896   0.0
VFG609 (VFG609Q) /CSM/VF/VFG6-A/VFG609Q.Seq.d/                        896   0.0
VFF560 (VFF560Q) /CSM/VF/VFF5-C/VFF560Q.Seq.d/                        896   0.0
VFF239 (VFF239Q) /CSM/VF/VFF2-B/VFF239Q.Seq.d/                        896   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 map complement(581327-427576) strain AX4, complete sequence.   888  0.0  1
BD244275|BD244275.1 Determination method of nucleotide sequence using arbitrary primer and low stringency.    40  3.3  2
BG603395|BG603395.1 EST502485 Plasmodium yoelii sporozoite cDNA Plasmodium yoelii cDNA clone PYCDR17, mRNA sequence.    36  3.6  2
AZ731876|AZ731876.1 RPCI-24-128D3.TJ RPCI-24 Mus musculus genomic clone RPCI-24-128D3, DNA sequence.    42  6.0  1
BZ715591|BZ715591.1 OGEAT50TM ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0219J04, DNA sequence.    42  6.0  1
CB999783|CB999783.1 AGENCOURT_13659922 NIH_MGC_186 Homo sapiens cDNA clone IMAGE:30322818 5', mRNA sequence.    42  6.0  1
AC140454|AC140454.2 Mus musculus chromosome UNK clone RP24-163I14, WORKING DRAFT SEQUENCE, 8 unordered pieces.    42  6.0  1
CC645442|CC645442.1 OGMAS66TH ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0330L11, genomic survey sequence.    42  6.0  1
AC126409|AC126409.2 Mus musculus clone RP23-342O13, WORKING DRAFT SEQUENCE, 10 unordered pieces.    42  6.0  1
CG235414|CG235414.1 OGYCC91TH ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0786P13, genomic survey sequence.    42  6.0  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116551_43(AC116551|pid:none) Dictyostelium discoideum chromoso...   322   3e-87
AM746676_5484(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...   114   8e-25
BC012312_1(BC012312|pid:none) Mus musculus kelch domain containi...    54   2e-06
BC058359_1(BC058359|pid:none) Mus musculus kelch domain containi...    54   2e-06
(Q921I2) RecName: Full=Kelch domain-containing protein 4;  &BC02...    54   2e-06
BC062489_1(BC062489|pid:none) Xenopus tropicalis kelch domain co...    52   5e-06
AB055250_1(AB055250|pid:none) Macaca fascicularis brain cDNA, cl...    52   6e-06
AK023986_1(AK023986|pid:none) Homo sapiens cDNA FLJ13924 fis, cl...    51   1e-05
(Q8TBB5) RecName: Full=Kelch domain-containing protein 4;  &BC02...    51   1e-05
BC001044_1(BC001044|pid:none) Homo sapiens kelch domain containi...    51   1e-05

 psg: 0.75  gvh: 0.43  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for VFG409 is cyt

>VFG409Z.Seq
----------TTCCAGGGTGCCCTTAAAACTGATACCATTGTTTTTGATTCTGTCAATGG
ATGGCAACAAGTCGATGTAGTAGGTGCATCACCAACCCCAAGAGCTCATCATCATTTACA
CTATAATGAAGAATTAGATTCAATTTTCACCTATGGCGGCTATACCAATTGTAGTACCTA
CACCACCAATGAATGTAATTATCTTGGCGATTTATGGAGTCTTGATTTATCAACAAAAGT
TTGGAAGCAACATCTCTTTGATGTAACCAAAGGACCAGGAAATAGAGATAATGCCAAATT
CATTTATTCCGATCAAAATCAACTTTTCTTAATTGGTGGAAGTAATTATCAATACACCAA
CTTTATGGATGTATGGCGTTTTGATTTAATTACAAATGAATGGACTCAATTAACCATTTT
ACCATTAGTTGATCCAGAAACTTATATTCAAACTCCAATTCCAAGTAC