VFG134
Library VF
(Link to library)
Clone ID VFG134
Atlas ID -
NBRP ID
dictyBase ID
Link to Contig Contig-U10367-1
Original site URL
Representative seq. ID VFG134E
(Link to Original site)
Representative DNA sequence
>VFG134 (VFG134Q) /CSM/VF/VFG1-B/VFG134Q.Seq.d/
AACTCGATGTGTCAATAAAAAAAAAGAAATGTTGAAGTCAAAAATATCATTTATTTCAAG
ATGTACCTATAAAATAATAGAAGCCCAAAAATTTGAGGCCCAATATCTAACGAAAATAAA
ACCATCAAACCAAAATATAAATCCTAGGAAATCAAAATTTTTGAAATTTTTTAAAGACCA
GCCCAAAATTACAAATAATACAAATAAAACAAAAACAAAAGCAAAAGCAAATGCAAAAGC
AACACCATCAGAAACTACAGAAGCAACAACAAAAGAAAAAAATAAAGTTATGACATTTCT
TGGTAAACCATTTGAATTCAACAGATCTAGATATATTGAAATATCTAAAGAAAATCAAAT
TCAATTATTTTTTAGAGCATTAAAACATTGTGGTGGTTCATCGATTTCAGATATTTATAA
AATTTCCTATAGAGAATTTACAAATTCACCAGAAGGTCAATCTATATTTTATTTTTTTGG
TGGATCAATGGTTAGAATGTGTTATACATTATTTCCAGATTTCGAATGGGCACCATGGGT
TATTTAAAAAAGAATAGTGATTTATCAAAAATGAGAAGAGAAAAAAGATTATGATTATAG
TAGAGAAATTAAATGGTTCGCTGCAAAACACAATATCAAAGATTCAAATTTAGATGACTG
GTATAAAATGAAATTAACCGACCTTTTAAAGGAATGCAAGATACGAAATCTCTTTAGTAT
TGGTTTGGTAGATTTCATTCGAAAAGCGTACCCACATCATAAATTTTATTTATTTAAATT
CCATAAAATTATATTGTGGTGGAAGTATCCAGACGGACTTGACGATTTCCGTCAATATTT
ACTCAAAGAAACACAATTCACTTCAATGGAACAATTTTATTTATTGTCAAAAACAAAATT
CACTTCTTTGGGAGGTACCTCGCTTCTTTTATACTACAAATATGATTTACACCAAATCTA
TAGCATATTATTTCCAGATTATCCTTGGAATAAAGAATTACTAACACCAGAGGCCTTTCA
ACAACTTACAAATCCAAAGTTTGAAAAAATAGAACCAATTTCCAAAAATTTCGATTTTCC
AAAATTTAAAAAGAAAAAATCAAAATTTAAATATGAAACTTTTGCTCCGACTCAAATAGA
AACTCAACAAGAATTACTCAATAAAATTAANAAAATCTTAAATAACA
sequence update 2001. 6. 9
Translated Amino Acid sequence
trcvnkkkemlkskisfisrctykiieaqkfeaqyltkikpsnqninprkskflkffkdq
pkitnntnktktkakanakatpsetteattkeknkvmtflgkpfefnrsryieiskenqi
qlffralkhcggssisdiykisyreftnspegqsifyffggsmvrmcytlfpdfewapwv
i*kriviyqk*EEKKDYDYSREIKWFAAKHNIKDSNLDDWYKMKLTDLLKECKIRNLFSI
GLVDFIRKAYPHHKFYLFKFHKIILWWKYPDGLDDFRQYLLKETQFTSMEQFYLLSKTKF
TSLGGTSLLLYYKYDLHQIYSILFPDYPWNKELLTPEAFQQLTNPKFEKIEPISKNFDFP
KFKKKKSKFKYETFAPTQIETQQELLNKIXKILNN


Translated Amino Acid sequence (All Frames)
Frame A:
nsmcq*kkrnvevkniiyfkmyl*nnrspki*gpisnenktikpkyks*eikifeif*rp
aqnyk*yk*nknkskskcksntirnyrsnnkrkk*sydisw*ti*iqqi*iy*ni*rksn
siif*siktlwwfidfryl*nfl*riykftrrsiyilffwwing*nvlyiisrfrmgtmg
ylkknsdlskmrrekrl*l**rn*mvrcktqyqrfkfr*lv*neinrpfkgmqdtksl*y
wfgrfhsksvpts*ilfi*ip*nyivvevsrrt*rfpsiftqrntihfngtilfivknki
hffgrylasfilqi*ftpnl*hiisrlsle*ritntrglsttykskv*knrtnfqkfrfs
ki*kekiki*i*nfcsdsnrnstritq*n*xnlk*


Frame B:
trcvnkkkemlkskisfisrctykiieaqkfeaqyltkikpsnqninprkskflkffkdq
pkitnntnktktkakanakatpsetteattkeknkvmtflgkpfefnrsryieiskenqi
qlffralkhcggssisdiykisyreftnspegqsifyffggsmvrmcytlfpdfewapwv
i*kriviyqk*EEKKDYDYSREIKWFAAKHNIKDSNLDDWYKMKLTDLLKECKIRNLFSI
GLVDFIRKAYPHHKFYLFKFHKIILWWKYPDGLDDFRQYLLKETQFTSMEQFYLLSKTKF
TSLGGTSLLLYYKYDLHQIYSILFPDYPWNKELLTPEAFQQLTNPKFEKIEPISKNFDFP
KFKKKKSKFKYETFAPTQIETQQELLNKIXKILNN


Frame C:
ldvsikkkkc*sqkyhlfqdvpik**kpknlrpni*rk*nhqtki*ilgnqnf*nflkts
pklqiiqikqkqkqkqmqkqhhqklqkqqqkkkikl*hflvnhlnstdldilkylkkikf
nyfleh*nivvvhrfqifikfpienlqihqkvnlyfiflvdqwlecvihyfqisnghhgl
fkke**fiknekrkkimiiveklngslqntiskiqi*mtgik*n*ptf*rnaryeislvl
vw*isfekrthiinfiylnsiklycggsiqtdltisvniyskkhnslqwnnfiycqkqns
llwevprffyttnmiytksiayyfqiilgikny*hqrpfnnlqiqslkk*nqfpkisifq
nlkrknqnlnmklllrlk*klnknysiklxks*it


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VFG134 (VFG134Q) /CSM/VF/VFG1-B/VFG134Q.Seq.d/ 1489 0.0
VFM303 (VFM303Q) /CSM/VF/VFM3-A/VFM303Q.Seq.d/ 1441 0.0
VFB338 (VFB338Q) /CSM/VF/VFB3-B/VFB338Q.Seq.d/ 1441 0.0
VFI315 (VFI315Q) /CSM/VF/VFI3-A/VFI315Q.Seq.d/ 1433 0.0
AHD134 (AHD134Q) /CSM/AH/AHD1-B/AHD134Q.Seq.d/ 42 0.019
SSG457 (SSG457Q) /CSM/SS/SSG4-C/SSG457Q.Seq.d/ 40 0.076
SSG148 (SSG148Q) /CSM/SS/SSG1-B/SSG148Q.Seq.d/ 40 0.076
FC-IC1121 (FC-IC1121Q) /CSM/FC-IC/FC-IC1121Q.Seq.d/ 40 0.076
AHB608 (AHB608Q) /CSM/AH/AHB6-A/AHB608Q.Seq.d/ 40 0.076
VSA772 (VSA772Q) /CSM/VS/VSA7-C/VSA772Q.Seq.d/ 38 0.30

own update 2003. 6.19
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AC115030|AC115030.3 Mus musculus clone RP24-255E15, WORKING DRAFT SEQUENCE, 7 ordered pieces. 34 0.004 6
AC007833|AC007833.2 Homo sapiens clone RP11-33A7, WORKING DRAFT SEQUENCE, 13 unordered pieces. 36 0.14 7
AC137033|AC137033.1 Rattus norvegicus clone CH230-unknown, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces. 42 0.15 5
AL161515|AL161515.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27. 40 0.19 5
AL157814|AL157814.14 Human DNA sequence *** SEQUENCING IN PROGRESS *** from clone RP11-285E18. 42 0.23 3
AL031745|AL031745.8 Plasmodium falciparum DNA from MAL1P2. 34 0.25 12
AB063522|AB063522.2 Wigglesworthia brevipalpis DNA, complete genome, section 2/2. 36 0.34 13
AX344560|AX344560.1 Sequence 11 from Patent WO0200932. 32 0.35 13
BE805562|BE805562.1 ss47c12.y1 Gm-c1061 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1061-1871 5' similar to TR:O49702 O49702 HYPOTHETICAL 71.3 KD PROTEIN. ;, mRNA sequence. 42 0.41 2
AC091896|AC091896.1 Homo sapiens chromosome 5 clone RP11-143O15, WORKING DRAFT SEQUENCE, 26 unordered pieces. 40 0.45 6
dna update 2003. 9.25
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

AC116330_18(AC116330|pid:none) Dictyostelium discoideum chromoso... 36 3.1
CP000509_3717(CP000509|pid:none) Nocardioides sp. JS614, complet... 35 5.2
(Q97IR8) RecName: Full=Fructose-1,6-bisphosphatase class 3; ... 35 6.8

protein update 2009. 3. 8
PSORT

psg: 0.75 gvh: 0.41 alm: 0.49 top: 0.53 tms: 0.00 mit: 0.07 mip: 0.00
nuc: 0.10 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
40.0 %: nuclear
12.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for VFG134 is cyt

5' end seq. ID VFG134F
5' end seq.
>VFG134F.Seq
AACTCGATGTGTCAATAAAAAAAAAGAAATGTTGAAGTCAAAAATATCATTTATTTCAAG
ATGTACCTATAAAATAATAGAAGCCCAAAAATTTGAGGCCCAATATCTAACGAAAATAAA
ACCATCAAACCAAAATATAAATCCTAGGAAATCAAAATTTTTGAAATTTTTTAAAGACCA
GCCCAAAATTACAAATAATACAAATAAAACAAAAACAAAAGCAAAAGCAAATGCAAAAGC
AACACCATCAGAAACTACAGAAGCAACAACAAAAGAAAAAAATAAAGTTATGACATTTCT
TGGTAAACCATTTGAATTCAACAGATCTAGATATATTGAAATATCTAAAGAAAATCAAAT
TCAATTATTTTTTAGAGCATTAAAACATTGTGGTGGTTCATCGATTTCAGATATTTATAA
AATTTCCTATAGAGAATTTACAAATTCACCAGAAGGTCAATCTATATTTTATTTTTTTGG
TGGATCAATGGTTAGAATGTGTTATACATTATTTCCAGATTTCGAATGGGCACCATGGTT
ATTTAAAAAGAATAGTGATTTATCAAAAATGAGAAGAGAAAAAGATTATGATTATAGTAG
AGAAA----------
Length of 5' end seq. 605
3' end seq. ID VFG134Z
3' end seq.
>VFG134Z.Seq
----------TCGAATGGGCACCATGGGTTATTTAAAAAAGAATAGTGATTTATCAAAAA
TGAGAAGAGAAAAAAGATTATGATTATAGTAGAGAAATTAAATGGTTCGCTGCAAAACAC
AATATCAAAGATTCAAATTTAGATGACTGGTATAAAATGAAATTAACCGACCTTTTAAAG
GAATGCAAGATACGAAATCTCTTTAGTATTGGTTTGGTAGATTTCATTCGAAAAGCGTAC
CCACATCATAAATTTTATTTATTTAAATTCCATAAAATTATATTGTGGTGGAAGTATCCA
GACGGACTTGACGATTTCCGTCAATATTTACTCAAAGAAACACAATTCACTTCAATGGAA
CAATTTTATTTATTGTCAAAAACAAAATTCACTTCTTTGGGAGGTACCTCGCTTCTTTTA
TACTACAAATATGATTTACACCAAATCTATAGCATATTATTTCCAGATTATCCTTGGAAT
AAAGAATTACTAACACCAGAGGCCTTTCAACAACTTACAAATCCAAAGTTTGAAAAAATA
GAACCAATTTCCAAAAATTTCGATTTTCCAAAATTTAAAAAGAAAAAATCAAAATTTAAA
TATGAAACTTTTGCTCCGACTCAAATAGAAACTCAACAAGAATTACTCAATAAAATTAAN
AAAATCTTAAATAACA
Length of 3' end seq. 666
Connected seq. ID VFG134P
Connected seq.
>VFG134P.Seq
AACTCGATGTGTCAATAAAAAAAAAGAAATGTTGAAGTCAAAAATATCATTTATTTCAAG
ATGTACCTATAAAATAATAGAAGCCCAAAAATTTGAGGCCCAATATCTAACGAAAATAAA
ACCATCAAACCAAAATATAAATCCTAGGAAATCAAAATTTTTGAAATTTTTTAAAGACCA
GCCCAAAATTACAAATAATACAAATAAAACAAAAACAAAAGCAAAAGCAAATGCAAAAGC
AACACCATCAGAAACTACAGAAGCAACAACAAAAGAAAAAAATAAAGTTATGACATTTCT
TGGTAAACCATTTGAATTCAACAGATCTAGATATATTGAAATATCTAAAGAAAATCAAAT
TCAATTATTTTTTAGAGCATTAAAACATTGTGGTGGTTCATCGATTTCAGATATTTATAA
AATTTCCTATAGAGAATTTACAAATTCACCAGAAGGTCAATCTATATTTTATTTTTTTGG
TGGATCAATGGTTAGAATGTGTTATACATTATTTCCAGATTTCGAATGGGCACCATGGTT
ATTTAAAAAGAATAGTGATTTATCAAAAATGAGAAGAGAAAAAGATTATGATTATAGTAG
AGAAA----------TCGAATGGGCACCATGGGTTATTTAAAAAAGAATAGTGATTTATC
AAAAATGAGAAGAGAAAAAAGATTATGATTATAGTAGAGAAATTAAATGGTTCGCTGCAA
AACACAATATCAAAGATTCAAATTTAGATGACTGGTATAAAATGAAATTAACCGACCTTT
TAAAGGAATGCAAGATACGAAATCTCTTTAGTATTGGTTTGGTAGATTTCATTCGAAAAG
CGTACCCACATCATAAATTTTATTTATTTAAATTCCATAAAATTATATTGTGGTGGAAGT
ATCCAGACGGACTTGACGATTTCCGTCAATATTTACTCAAAGAAACACAATTCACTTCAA
TGGAACAATTTTATTTATTGTCAAAAACAAAATTCACTTCTTTGGGAGGTACCTCGCTTC
TTTTATACTACAAATATGATTTACACCAAATCTATAGCATATTATTTCCAGATTATCCTT
GGAATAAAGAATTACTAACACCAGAGGCCTTTCAACAACTTACAAATCCAAAGTTTGAAA
AAATAGAACCAATTTCCAAAAATTTCGATTTTCCAAAATTTAAAAAGAAAAAATCAAAAT
TTAAATATGAAACTTTTGCTCCGACTCAAATAGAAACTCAACAAGAATTACTCAATAAAA
TTAANAAAATCTTAAATAACA
Length of connected seq. 1271
Full length Seq ID VFG134E
Full length Seq.
>VFG134E.Seq
AACTCGATGTGTCAATAAAAAAAAAGAAATGTTGAAGTCAAAAATATCATTTATTTCAAG
ATGTACCTATAAAATAATAGAAGCCCAAAAATTTGAGGCCCAATATCTAACGAAAATAAA
ACCATCAAACCAAAATATAAATCCTAGGAAATCAAAATTTTTGAAATTTTTTAAAGACCA
GCCCAAAATTACAAATAATACAAATAAAACAAAAACAAAAGCAAAAGCAAATGCAAAAGC
AACACCATCAGAAACTACAGAAGCAACAACAAAAGAAAAAAATAAAGTTATGACATTTCT
TGGTAAACCATTTGAATTCAACAGATCTAGATATATTGAAATATCTAAAGAAAATCAAAT
TCAATTATTTTTTAGAGCATTAAAACATTGTGGTGGTTCATCGATTTCAGATATTTATAA
AATTTCCTATAGAGAATTTACAAATTCACCAGAAGGTCAATCTATATTTTATTTTTTTGG
TGGATCAATGGTTAGAATGTGTTATACATTATTTCCAGATTTCGAATGGGCACCATGGGT
TATTTAAAAAAGAATAGTGATTTATCAAAAATGAGAAGAGAAAAAAGATTATGATTATAG
TAGAGAAATTAAATGGTTCGCTGCAAAACACAATATCAAAGATTCAAATTTAGATGACTG
GTATAAAATGAAATTAACCGACCTTTTAAAGGAATGCAAGATACGAAATCTCTTTAGTAT
TGGTTTGGTAGATTTCATTCGAAAAGCGTACCCACATCATAAATTTTATTTATTTAAATT
CCATAAAATTATATTGTGGTGGAAGTATCCAGACGGACTTGACGATTTCCGTCAATATTT
ACTCAAAGAAACACAATTCACTTCAATGGAACAATTTTATTTATTGTCAAAAACAAAATT
CACTTCTTTGGGAGGTACCTCGCTTCTTTTATACTACAAATATGATTTACACCAAATCTA
TAGCATATTATTTCCAGATTATCCTTGGAATAAAGAATTACTAACACCAGAGGCCTTTCA
ACAACTTACAAATCCAAAGTTTGAAAAAATAGAACCAATTTCCAAAAATTTCGATTTTCC
AAAATTTAAAAAGAAAAAATCAAAATTTAAATATGAAACTTTTGCTCCGACTCAAATAGA
AACTCAACAAGAATTACTCAATAAAATTAANAAAATCTTAAATAACA
Length of full length seq. 1187