>VFE846 (VFE846Q) /CSM/VF/VFE8-B/VFE846Q.Seq.d/
XXXXXXXXXXTAAGAAAGTAAACACTTGTGGTGTTACTTATGATGGTGGTTATGCAGAGT
ATATGATTGCACCAATTAGTGCACTTGTTAAAATACCAAAAGGAATGGACCCACTTGAAG
CTGCACCATTGTTATGTGCAGGTGTAACAGTTTATAATTCATTTAGACATCAAGACATTA
AAGTAGGTTCATTGGTTGGTGTTACAGGTATTGGTGGTTTAGGTCATTATGCAATTCAAT
TCTGTAAGAAAATGGGTTACCAAGTGATTGCAATGTCAAGTGGTAATTCAAAAGAACAAC
TCTCAAAAGAATTGGGTGCAGATTATTATGTTGATATGTCAAAGGATAATTACATTCAAG
AGATTCAATCAATTGGTTCAGTTAAATGTATTTTAGCAACTGCACCAATTGCATCAACTG
TTCAAGGTTTATTAGAGTCTTTAGGTATAAATGGTAAATTGGTGATTTTGGCTGCTTTCC
ATGAACCATTCCATGCAGATTCATTGACAATGATTGGTGGTTCTAAATCAATCGTTGGTT
GGGCTTCTGGTGATAATCGTGATTCTCTTGATACTTTAAATTTTGCTCGTAATAATAATA
TTAAATCATTAGTAAATACTTTCCCATTGGAAAAAGCAAATGAAGCTTTTGAAAATATTG
GTCAAGCAAAATTTAGACATGTTATTAAATTATTATAAAAAATAGTAATAATA

---KKVNTCGVTYDGGYAEYMIAPISALVKIPKGMDPLEAAPLLCAGVTVYNSFRHQDIK
VGSLVGVTGIGGLGHYAIQFCKKMGYQVIAMSSGNSKEQLSKELGADYYVDMSKDNYIQE
IQSIGSVKCILATAPIASTVQGLLESLGINGKLVILAAFHEPFHADSLTMIGGSKSIVGW
ASGDNRDSLDTLNFARNNNIKSLVNTFPLEKANEAFENIGQAKFRHVIKLL*kivii

Frame A:
---KKVNTCGVTYDGGYAEYMIAPISALVKIPKGMDPLEAAPLLCAGVTVYNSFRHQDIK
VGSLVGVTGIGGLGHYAIQFCKKMGYQVIAMSSGNSKEQLSKELGADYYVDMSKDNYIQE
IQSIGSVKCILATAPIASTVQGLLESLGINGKLVILAAFHEPFHADSLTMIGGSKSIVGW
ASGDNRDSLDTLNFARNNNIKSLVNTFPLEKANEAFENIGQAKFRHVIKLL*kivii


Frame B:
---rk*tlvvllmmvvmqsi*lhqlvhllkyqkewthlklhhcyvqv*qfiihldiktlk
*vhwlvlqvlvv*vimqfnsvrkwvtk*lqcqvviqknnsqknwvqiimlicqriitfkr
fnqlvqlnvf*qlhqlhqlfkvy*sl*v*mvnw*fwllsmnhsmqih*q*lvvlnqslvg
llviivillil*illviiilnh**ilshwkkqmkllkilvkqnldmllnyykk***


Frame C:
---eskhlwcyl*wwlcrvydctn*ctc*ntkrngpt*sctivmcrcnsl*fi*tsrh*s
rfigwcyrywwfrslcnsil*englpsdcnvkw*fkrttlkrigcrllc*yvkg*lhsrd
sinwfs*myfsnctncincsrfirvfrykw*igdfgcfp*tipcrfidndwwf*inrwlg
fw**s*fs*yfkfcs***y*iiskyfpigksk*sf*kywsski*tcy*iiiknsnn

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFE846 (VFE846Q) /CSM/VF/VFE8-B/VFE846Q.Seq.d/                       1394   0.0
VFD860 (VFD860Q) /CSM/VF/VFD8-C/VFD860Q.Seq.d/                       1352   0.0
SSL793 (SSL793Q) /CSM/SS/SSL7-D/SSL793Q.Seq.d/                       1350   0.0
VFH533 (VFH533Q) /CSM/VF/VFH5-B/VFH533Q.Seq.d/                       1324   0.0
VFJ126 (VFJ126Q) /CSM/VF/VFJ1-B/VFJ126Q.Seq.d/                       1322   0.0
VFD346 (VFD346Q) /CSM/VF/VFD3-B/VFD346Q.Seq.d/                       1304   0.0
VFK647 (VFK647Q) /CSM/VF/VFK6-B/VFK647Q.Seq.d/                       1302   0.0
VFI869 (VFI869Q) /CSM/VF/VFI8-C/VFI869Q.Seq.d/                       1289   0.0
VFM488 (VFM488Q) /CSM/VF/VFM4-D/VFM488Q.Seq.d/                       1279   0.0
VFB752 (VFB752Q) /CSM/VF/VFB7-C/VFB752Q.Seq.d/                       1277   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.  1394  0.0  9
AC115594|AC115594.2 Dictyostelium discoideum chromosome 2 map 4071862-4101005 strain AX4, complete sequence.   113  2e-32  5
AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence.   113  5e-32  8
AW928461|AW928461.1 EST337249 tomato flower buds 8 mm to pre-anthesis, Cornell University Lycopersicon esculentum cDNA clone cTOC1D13 5', mRNA sequence.    50  0.038  1
BE459099|BE459099.1 EST414391 tomato developing/immature green fruit Lycopersicon esculentum cDNA clone cLEM5D1, mRNA sequence.    50  0.038  1
AW650034|AW650034.1 EST328488 tomato germinating seedlings, TAMU Lycopersicon esculentum cDNA clone cLEI11F15 5', mRNA sequence.    50  0.038  1
BG128445|BG128445.1 EST474091 tomato shoot/meristem Lycopersicon esculentum cDNA clone cTOF20D10 5' sequence, mRNA sequence.    50  0.038  1
BF051619|BF051619.1 EST436849 tomato developing/immature green fruit Lycopersicon esculentum cDNA clone cLEM23L21 5' sequence, mRNA sequence.    50  0.038  1
BI927384|BI927384.1 EST547273 tomato flower, 3 - 8 mm buds Lycopersicon esculentum cDNA clone cTOB22K5 5' end, mRNA sequence.    50  0.038  1
AW648829|AW648829.1 EST327283 tomato germinating seedlings, TAMU Lycopersicon esculentum cDNA clone cLEI6E1 5', mRNA sequence.    50  0.038  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116984_6(AC116984|pid:none) Dictyostelium discoideum chromosom...   446   e-124
AC116984_84(AC116984|pid:none) Dictyostelium discoideum chromoso...   325   1e-87
AC117072_38(AC117072|pid:none) Dictyostelium discoideum chromoso...   303   3e-81
CP001053_1640(CP001053|pid:none) Burkholderia phytofirmans PsJN ...   202   1e-50
CP000271_1921(CP000271|pid:none) Burkholderia xenovorans LB400 c...   200   4e-50
AY596296_262(AY596296|pid:none) Haloarcula marismortui ATCC 4304...   192   6e-48
CP000159_2251(CP000159|pid:none) Salinibacter ruber DSM 13855, c...   192   1e-47
CP000721_3789(CP000721|pid:none) Clostridium beijerinckii NCIMB ...   191   2e-47
AP009386_144(AP009386|pid:none) Burkholderia multivorans ATCC 17...   180   4e-44
CP000360_3040(CP000360|pid:none) Acidobacteria bacterium Ellin34...   179   7e-44

 psg: 0.76  gvh: 0.39  alm: 0.36  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for VFE846 is cyt

>VFE846Z.Seq
----------TAAGAAAGTAAACACTTGTGGTGTTACTTATGATGGTGGTTATGCAGAGT
ATATGATTGCACCAATTAGTGCACTTGTTAAAATACCAAAAGGAATGGACCCACTTGAAG
CTGCACCATTGTTATGTGCAGGTGTAACAGTTTATAATTCATTTAGACATCAAGACATTA
AAGTAGGTTCATTGGTTGGTGTTACAGGTATTGGTGGTTTAGGTCATTATGCAATTCAAT
TCTGTAAGAAAATGGGTTACCAAGTGATTGCAATGTCAAGTGGTAATTCAAAAGAACAAC
TCTCAAAAGAATTGGGTGCAGATTATTATGTTGATATGTCAAAGGATAATTACATTCAAG
AGATTCAATCAATTGGTTCAGTTAAATGTATTTTAGCAACTGCACCAATTGCATCAACTG
TTCAAGGTTTATTAGAGTCTTTAGGTATAAATGGTAAATTGGTGATTTTGGCTGCTTTCC
ATGAACCATTCCATGCAGATTCATTGACAATGATTGGTGGTTCTAAATCAATCGTTGGTT
GGGCTTCTGGTGATAATCGTGATTCTCTTGATACTTTAAATTTTGCTCGTAATAATAATA
TTAAATCATTAGTAAATACTTTCCCATTGGAAAAAGCAAATGAAGCTTTTGAAAATATTG
GTCAAGCAAAATTTAGACATGTTATTAAATTATTATAAAAAATAGTAATAATA