>VFE569 (VFE569Q) /CSM/VF/VFE5-C/VFE569Q.Seq.d/
XXXXXXXXXXACNTTTAATGTAAATTGTCCATTGTGTGATCCTTCATTCAGAGCATTGGC
TACCTCTTTACCAGTATCATTACAAAGTCATTCAAGTTTAGTTTGTCGTATCACTGGTGA
AATAATGAATGAAGATAACTATCCAATGGTTTTGCCAAATGGTAATGTTTTCAGTAAAAG
AGC

---FNVNCPLCDPSFRALATSLPVSLQSHSSLVCRITGEIMNEDNYPMVLPNGNVFSKR

Frame A:
---xlm*ivhcvilhsehwlplyqyhykviqv*fvvslvk**mkitiqwfcqmvmfsvke


Frame B:
---x*cklsiv*sfiqsigylftsiitksfkfslsyhw*nne*r*lsngfakw*cfq*ks


Frame C:
---FNVNCPLCDPSFRALATSLPVSLQSHSSLVCRITGEIMNEDNYPMVLPNGNVFSKR

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFE569 (VFE569Q) /CSM/VF/VFE5-C/VFE569Q.Seq.d/                        337   3e-92
SFI826 (SFI826Q) /CSM/SF/SFI8-B/SFI826Q.Seq.d/                        337   3e-92
SFE593 (SFE593Q) /CSM/SF/SFE5-D/SFE593Q.Seq.d/                        337   3e-92
AFE851 (AFE851Q) /CSM/AF/AFE8-C/AFE851Q.Seq.d/                        337   3e-92
VFO853 (VFO853Q) /CSM/VF/VFO8-C/VFO853Q.Seq.d/                        329   8e-90
SFF508 (SFF508Q) /CSM/SF/SFF5-A/SFF508Q.Seq.d/                        327   3e-89
VSH608 (VSH608Q) /CSM/VS/VSH6-A/VSH608Q.Seq.d/                         32   2.6
VSH256 (VSH256Q) /CSM/VS/VSH2-C/VSH256Q.Seq.d/                         32   2.6
VSG112 (VSG112Q) /CSM/VS/VSG1-A/VSG112Q.Seq.d/                         32   2.6
VFI809 (VFI809Q) /CSM/VF/VFI8-A/VFI809Q.Seq.d/                         32   2.6

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BX255904|BX255904.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    34  0.15  3
AC121756|AC121756.5 Homo sapiens 3 BAC RP11-455G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    46  0.33  2
CF476588|CF476588.1 RTWW3_2_E05.b1_A022 Well-watered loblolly pine roots WW3 Pinus taeda cDNA clone RTWW3_2_E05_A022 3', mRNA sequence.    36  0.40  2
CF473477|CF473477.1 RTWW2_3_A11.b2_A021 Well-watered loblolly pine roots WW2 Pinus taeda cDNA clone RTWW2_3_A11_A021 3', mRNA sequence.    36  0.49  2
AA701923|AA701923.1 zi64c10.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:435570 3', mRNA sequence.    44  0.55  1
BH821461|BH821461.1 BACPP16-G19.z Pristionchus pacificus BAC ends Pristionchus pacificus genomic, DNA sequence.    44  0.55  1
AC016058|AC016058.3 Homo sapiens chromosome 8 clone RP11-27K24 map 8, LOW-PASS SEQUENCE SAMPLING.    44  0.55  1
AC007401|AC007401.4 Homo sapiens BAC clone RP11-501O7 from 2, complete sequence.    44  0.55  1
AQ245190|AQ245190.1 HS_2008_A1_H03_T7 CIT Approved Human Genomic Sperm Library D Homo sapiens genomic clone Plate=2008 Col=5 Row=O, DNA sequence.    44  0.55  1
BH821239|BH821239.1 BACPP15-P23.y Pristionchus pacificus BAC ends Pristionchus pacificus genomic, DNA sequence.    44  0.55  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE017341_177(AE017341|pid:none) Cryptococcus neoformans var. neo...    65   7e-10
(Q7SXR3) RecName: Full=Macrophage erythroblast attacher;               62   5e-09
BC055388_1(BC055388|pid:none) Danio rerio macrophage erythroblas...    62   5e-09
BC080474_1(BC080474|pid:none) Xenopus tropicalis macrophage eryt...    61   1e-08
(Q5F398) RecName: Full=Macrophage erythroblast attacher;  &AJ851...    61   1e-08
AC119288_13(AC119288|pid:none) Oryza sativa (japonica cultivar-g...    60   3e-08
AB047627_1(AB047627|pid:none) Macaca fascicularis brain cDNA, cl...    59   4e-08
AK169149_1(AK169149|pid:none) Mus musculus 17 days embryo heart ...    59   4e-08
(Q4VC33) RecName: Full=Macrophage erythroblast attacher; AltName...    59   4e-08
AK034859_1(AK034859|pid:none) Mus musculus 12 days embryo embryo...    59   4e-08

 psg: 0.75  gvh: 0.60  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.30  mip: 0.06
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 32.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  8.0 %: peroxisomal
	  4.0 %: cytoskeletal

>> prediction for VFE569 is nuc

>VFE569Z.Seq
----------ACNTTTAATGTAAATTGTCCATTGTGTGATCCTTCATTCAGAGCATTGGC
TACCTCTTTACCAGTATCATTACAAAGTCATTCAAGTTTAGTTTGTCGTATCACTGGTGA
AATAATGAATGAAGATAACTATCCAATGGTTTTGCCAAATGGTAATGTTTTCAGTAAAAG
AGC