>VFC363 (VFC363Q) /CSM/VF/VFC3-C/VFC363Q.Seq.d/
XXXXXXXXXXATGAAGAAGATAAACCAATTAAAGCACAATCAATTATCATTGCAACTGGT
GCAACTGCAAAGAGAATGGGTGTACCAGGTGAAACAGAATTTTGGAGTAAAGGTGTTAGT
GCATGTGCAGTTTGTGATGGTGCTTTACCAATCTATAGAAATAAACATTTAGTTGTTGTT
GGTGGTGGTGATACTGCTGCTGAAGAGGCAACCTTTTTAACTCATTTCGCCTCAAAAGTT
ACTTTATTGGTCCGTCGTAATGTTATGCGTGCCTCAAAAGCAATGCAACAAAAAGTTTTC
TCTAACCCAAAGATCGAAGTTCTTTGGGATACCACTTTGGTCGAAATCAAAGGTGAAAAA
TCCGTTACCTCTGTTGGTATTTACAACTCTGAAACTAAAGTAAGCTCAAATCTCGACGCT
CAAGGTTTATTCTATGCCATTGGTCACACACCAAATTCTGCCTTCTTAAATGGTCAACTC
AATACCGATGAAACTGGTTACATCATCACTCAACCAGGTTCCACCAAAACAAACGTTGAA
GGTGTTTTCGCCTGTGGTGATGTTCAAG

---EEDKPIKAQSIIIATGATAKRMGVPGETEFWSKGVSACAVCDGALPIYRNKHLVVVG
GGDTAAEEATFLTHFASKVTLLVRRNVMRASKAMQQKVFSNPKIEVLWDTTLVEIKGEKS
VTSVGIYNSETKVSSNLDAQGLFYAIGHTPNSAFLNGQLNTDETGYIITQPGSTKTNVEG
VFACGDVQ

Frame A:
---*rr*tn*stinyhcnwcnckengctr*nrile*rc*cmcsl*wcftnl*k*tfsccw
ww*ycc*rgnlfnsfrlksyfigps*cyaclksnatksfl*pkdrsslgyhfgrnqr*ki
rylcwylql*n*sklksrrsrfilchwshtkfcllkwstqyr*nwlhhhstrfhqnkr*r
cfrlw*cs


Frame B:
---EEDKPIKAQSIIIATGATAKRMGVPGETEFWSKGVSACAVCDGALPIYRNKHLVVVG
GGDTAAEEATFLTHFASKVTLLVRRNVMRASKAMQQKVFSNPKIEVLWDTTLVEIKGEKS
VTSVGIYNSETKVSSNLDAQGLFYAIGHTPNSAFLNGQLNTDETGYIITQPGSTKTNVEG
VFACGDVQ


Frame C:
---kkinqlkhnqlslqlvqlqrewvyqvkqnfgvkvlvhvqfvmvlyqsieini*lllv
vvilllkrqpf*lispqkllywsvvmlcvpqkqcnkkfsltqrskffgiplwskskvknp
lpllvfttlklk*aqistlkvysmplvthqilps*mvnsipmklvtsslnqvppkqtlkv
fspvvmfk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFC363 (VFC363Q) /CSM/VF/VFC3-C/VFC363Q.Seq.d/                       1106   0.0
VFF579 (VFF579Q) /CSM/VF/VFF5-D/VFF579Q.Seq.d/                       1100   0.0
VFA664 (VFA664Q) /CSM/VF/VFA6-C/VFA664Q.Seq.d/                       1098   0.0
VFA257 (VFA257Q) /CSM/VF/VFA2-C/VFA257Q.Seq.d/                       1098   0.0
SSF790 (SSF790Q) /CSM/SS/SSF7-D/SSF790Q.Seq.d/                       1098   0.0
SSC329 (SSC329Q) /CSM/SS/SSC3-B/SSC329Q.Seq.d/                        961   0.0
SSJ832 (SSJ832Q) /CSM/SS/SSJ8-B/SSJ832Q.Seq.d/                        946   0.0
FC-BI22 (FC-BI22Q) /CSM/FC/FC-BI/FC-BI22Q.Seq.d/                      908   0.0
FC-478 (FC-478Q) /CSM/CG/CG-FC/FC-478Q.Seq.d/                         908   0.0
FC-BL09 (FC-BL09Q) /CSM/FC/FC-BL/FC-BL09Q.Seq.d/                      864   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BQ849761|BQ849761.1 QGB10M03.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGB10M03, mRNA sequence.    46  7e-07  2
BQ863331|BQ863331.1 QGC23J12.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC23J12, mRNA sequence.    46  7e-07  2
AC133899|AC133899.3 Mus musculus clone RP24-511H11, WORKING DRAFT SEQUENCE, 3 unordered pieces.    60  3e-05  1
C26099|C26099.1 Oryza sativa (japonica cultivar-group) cDNA, partial sequence (C11630_1A).    48  1e-04  2
CF439442|CF439442.1 EST675787 normalized cDNA library of onion Allium cepa cDNA clone ACAAM49, mRNA sequence.    58  1e-04  1
CF447780|CF447780.1 EST684125 normalized cDNA library of onion Allium cepa cDNA clone ACABG46, mRNA sequence.    58  1e-04  1
CB676820|CB676820.1 OSJNEe13E20.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA clone OSJNEe13E20 5', mRNA sequence.    48  2e-04  2
AK068311|AK068311.1 Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full insert sequence.    48  3e-04  2
AC107232|AC107232.2 Mus musculus clone RP23-144B2, WORKING DRAFT SEQUENCE, 41 ordered pieces.    60  5e-04  2
AL427983|AL427983.1 clone BA0AB023A05 of library BA0AB from strain CLIB 210 of  Kluyveromyces lactis.    38  8e-04  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54UU8) RecName: Full=Thioredoxin reductase;          EC=1.8.1.9;    369   e-101
CP000499_327(CP000499|pid:none) Pichia stipitis CBS 6054 chromos...   225   7e-58
AG1898(AG1898) thioredoxin reductase [imported] - Nostoc sp. (st...   224   1e-57
AE016823_1431(AE016823|pid:none) Leptospira interrogans serovar ...   223   3e-57
CP000828_4794(CP000828|pid:none) Acaryochloris marina MBIC11017,...   221   8e-57
CP000117_4608(CP000117|pid:none) Anabaena variabilis ATCC 29413,...   221   1e-56
FM992692_250(FM992692|pid:none) Candida dubliniensis CD36 chromo...   218   7e-56
CP000240_2728(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1...   216   3e-55
AP009552_5280(AP009552|pid:none) Microcystis aeruginosa NIES-843...   215   8e-55
CP001291_3719(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...   215   8e-55

 psg: 0.75  gvh: 0.53  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.09  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for VFC363 is cyt

>VFC363Z.Seq
----------ATGAAGAAGATAAACCAATTAAAGCACAATCAATTATCATTGCAACTGGT
GCAACTGCAAAGAGAATGGGTGTACCAGGTGAAACAGAATTTTGGAGTAAAGGTGTTAGT
GCATGTGCAGTTTGTGATGGTGCTTTACCAATCTATAGAAATAAACATTTAGTTGTTGTT
GGTGGTGGTGATACTGCTGCTGAAGAGGCAACCTTTTTAACTCATTTCGCCTCAAAAGTT
ACTTTATTGGTCCGTCGTAATGTTATGCGTGCCTCAAAAGCAATGCAACAAAAAGTTTTC
TCTAACCCAAAGATCGAAGTTCTTTGGGATACCACTTTGGTCGAAATCAAAGGTGAAAAA
TCCGTTACCTCTGTTGGTATTTACAACTCTGAAACTAAAGTAAGCTCAAATCTCGACGCT
CAAGGTTTATTCTATGCCATTGGTCACACACCAAATTCTGCCTTCTTAAATGGTCAACTC
AATACCGATGAAACTGGTTACATCATCACTCAACCAGGTTCCACCAAAACAAACGTTGAA
GGTGTTTTCGCCTGTGGTGATGTTCAAG