>VFC222 (VFC222Q) /CSM/VF/VFC2-A/VFC222Q.Seq.d/
XXXXXXXXXXTGGTATGGTAAATTTTACAAAACTTGGAATTGATGAAAGTTCATTAGTAA
TGGGACTACCATGGTATGGATACAATTATCCATGTATTGGCTCAAATTATACATTACAAA
CATTTGAATGTATTATTCCTCCTTCCAGTTATTTAGGTTATAATTGCACAGATGCATCAG
GAATTGAAATTAATTACTCAATCATTATGAATATGTTAAATGATACAGCAATACAAAATG
GTGGTGTTCAATGGGATTCAGAATCAGAGTCACCATATTTTAATTTTATTGACTTATTTT
CTGGTACTCAACACCAAATGTGGTTTGATAATCCAGACTCATTAACCAT

---GMVNFTKLGIDESSLVMGLPWYGYNYPCIGSNYTLQTFECIIPPSSYLGYNCTDASG
IEINYSIIMNMLNDTAIQNGGVQWDSESESPYFNFIDLFSGTQHQMWFDNPDSLT

Frame A:
---GMVNFTKLGIDESSLVMGLPWYGYNYPCIGSNYTLQTFECIIPPSSYLGYNCTDASG
IEINYSIIMNMLNDTAIQNGGVQWDSESESPYFNFIDLFSGTQHQMWFDNPDSLT


Frame B:
---vw*ilqnlelmkvh**wdyhgmdtiihvlaqiihykhlnvlfllpvi*viiaqmhqe
lklitqsl*ic*miqqykmvvfngiqnqshhililltyflvlntkcgliiqth*p


Frame C:
---ygkfyktwn**kfisngttmvwiqlsmywlklyitni*myyssfqlfrl*lhrcirn
*n*llnhyeyvk*ysntkwwcsmgfrirvtif*fy*lifwystpnvv**srlinh

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFK726 (VFK726Q) /CSM/VF/VFK7-B/VFK726Q.Seq.d/                        672   0.0
VFK645 (VFK645Q) /CSM/VF/VFK6-B/VFK645Q.Seq.d/                        672   0.0
VFE783 (VFE783Q) /CSM/VF/VFE7-D/VFE783Q.Seq.d/                        672   0.0
VFC222 (VFC222Q) /CSM/VF/VFC2-A/VFC222Q.Seq.d/                        672   0.0
VFI247 (VFI247Q) /CSM/VF/VFI2-B/VFI247Q.Seq.d/                        666   0.0
VSC214 (VSC214Q) /CSM/VS/VSC2-A/VSC214Q.Seq.d/                        458   e-128
VSK411 (VSK411Q) /CSM/VS/VSK4-A/VSK411Q.Seq.d/                        280   1e-74
VSB130 (VSB130Q) /CSM/VS/VSB1-B/VSB130Q.Seq.d/                         48   9e-05
VHE448 (VHE448Q) /CSM/VH/VHE4-B/VHE448Q.Seq.d/                         38   0.085
VHL476 (VHL476Q) /CSM/VH/VHL4-D/VHL476Q.Seq.d/                         34   1.3

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116989|AC116989.2 Dictyostelium discoideum chromosome 2 map complement(3527391-3470188) strain AX4, complete sequence.   537  0.0  2
BZ968486|BZ968486.1 PUDGX58TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa184J20, DNA sequence.    46  0.041  2
BY723201|BY723201.1 Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130026L03, 5' end partial sequence.    42  0.51  2
BX571812|BX571812.2 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-194I4.    42  0.78  3
AL592044|AL592044.4 Human DNA sequence from clone RP13-407F1 on chromosome 13.    40  1.0  8
AC133701|AC133701.2 Rattus norvegicus clone CH230-23M24, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.    44  1.1  1
CC223108|CC223108.1 CH261-152J6_Sp6.2 CH261 Gallus gallus genomic clone CH261-152J6, DNA sequence.    44  1.1  1
AC126809|AC126809.5 Rattus norvegicus clone CH230-6K15, WORKING DRAFT SEQUENCE, 1 ordered piece.    44  1.1  1
CC240744|CC240744.1 CH261-45E19_Sp6.2 CH261 Gallus gallus genomic clone CH261-45E19, DNA sequence.    44  1.1  1
AC098687|AC098687.2 Bos taurus clone rp42-194o5, complete sequence.    42  1.1  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022594_1(BC022594|pid:none) Mus musculus chitobiase, di-N-acet...    92   7e-18
BC164759_1(BC164759|pid:none) Danio rerio chitobiase, di-N-acety...    92   7e-18
BC095064_1(BC095064|pid:none) Danio rerio chitobiase, di-N-acety...    92   7e-18
(Q8R242) RecName: Full=Di-N-acetylchitobiase;          EC=3.2.1....    92   7e-18
AB168353_1(AB168353|pid:none) Macaca fascicularis testis cDNA cl...    91   2e-17
AY260731_1(AY260731|pid:none) Xenopus laevis putative di-N-acety...    90   2e-17
BC072723_1(BC072723|pid:none) Danio rerio chitobiase, di-N-acety...    90   2e-17
BC088895_1(BC088895|pid:none) Xenopus tropicalis hypothetical LO...    88   8e-17
AC115592_28(AC115592|pid:none) Dictyostelium discoideum chromoso...    88   8e-17
AK314640_1(AK314640|pid:none) Homo sapiens cDNA, FLJ95483, highl...    85   9e-16

 psg: 0.81  gvh: 0.37  alm: 0.50  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 32.0 %: cytoplasmic
	 16.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for VFC222 is nuc

>VFC222Z.Seq
----------TGGTATGGTAAATTTTACAAAACTTGGAATTGATGAAAGTTCATTAGTAA
TGGGACTACCATGGTATGGATACAATTATCCATGTATTGGCTCAAATTATACATTACAAA
CATTTGAATGTATTATTCCTCCTTCCAGTTATTTAGGTTATAATTGCACAGATGCATCAG
GAATTGAAATTAATTACTCAATCATTATGAATATGTTAAATGATACAGCAATACAAAATG
GTGGTGTTCAATGGGATTCAGAATCAGAGTCACCATATTTTAATTTTATTGACTTATTTT
CTGGTACTCAACACCAAATGTGGTTTGATAATCCAGACTCATTAACCAT