>VFC191 (VFC191Q) /CSM/VF/VFC1-D/VFC191Q.Seq.d/
TTGGCCTACTGGAATTTATTTATTTATTCAAATATATATTATATTAAATAAAATGTTTGC
CAGATTAGCCAGGAGCTAACTACTTAAAGAATTCAGGTAGATACTTCTCTACTGAGCCAA
CCTTAAAAGAAAGATTAGTTCAAATCATCCCAGGTAAAATTGAACAAGTTAAACAATTAA
AAACTGAACATGGTGACAAAATCATTGGTACCTGTACTGTTGCACAAGCTTATGGTGGTA
TGAGATCAGTTAAATCATTAGTTACTGAAACATCATCATTAGATCCAGAAGAAGGCATTA
GATTCCGTGGTTTAACAATCCCAGAATGTCAAGAGAAATTACCAAAAGCTXXXXXXXXXX

gllefiylfkyily*ikclpd*PGANYLKNSGRYFSTEPTLKERLVQIIPGKIEQVKQLK
TEHGDKIIGTCTVAQAYGGMRSVKSLVTETSSLDPEEGIRFRGLTIPECQEKLPK---

Frame A:
laywnlfiysniyyik*nvcqisqeltt*riqvdtsllsqp*kkd*fkssqvklnklnn*
klnmvtkslvpvllhklmvv*dqlnh*llkhhh*iqkkaldsvv*qsqnvkrnyqk---


Frame B:
wptgiylfiqiyiilnkmfarlars*llkefr*illy*anlkrkissnhpr*n*ts*tik
n*tw*qnhwylycctslwwyeis*iisy*niiirsrrrh*ipwfnnprmsreitks---


Frame C:
gllefiylfkyily*ikclpd*PGANYLKNSGRYFSTEPTLKERLVQIIPGKIEQVKQLK
TEHGDKIIGTCTVAQAYGGMRSVKSLVTETSSLDPEEGIRFRGLTIPECQEKLPK---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFC191 (VFC191Q) /CSM/VF/VFC1-D/VFC191Q.Seq.d/                        694   0.0
AFI184 (AFI184Q) /CSM/AF/AFI1-D/AFI184Q.Seq.d/                        662   0.0
VFH547 (VFH547Q) /CSM/VF/VFH5-B/VFH547Q.Seq.d/                        656   0.0
VFO812 (VFO812Q) /CSM/VF/VFO8-A/VFO812Q.Seq.d/                        654   0.0
VFO296 (VFO296Q) /CSM/VF/VFO2-D/VFO296Q.Seq.d/                        654   0.0
VFO156 (VFO156Q) /CSM/VF/VFO1-C/VFO156Q.Seq.d/                        654   0.0
VFO142 (VFO142Q) /CSM/VF/VFO1-B/VFO142Q.Seq.d/                        654   0.0
VFN189 (VFN189Q) /CSM/VF/VFN1-D/VFN189Q.Seq.d/                        654   0.0
VFM621 (VFM621Q) /CSM/VF/VFM6-A/VFM621Q.Seq.d/                        654   0.0
VFM247 (VFM247Q) /CSM/VF/VFM2-B/VFM247Q.Seq.d/                        654   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   244  e-150  5
CD450751|CD450751.1 USDA-FP_102714 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-37_E02 5', mRNA sequence.    46  4e-04  2
CB832670|CB832670.1 USDA-FP_100461 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-07_A07 5', mRNA sequence.    46  8e-04  2
AC096296|AC096296.7 Rattus norvegicus clone CH230-36L16, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    54  0.001  1
AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromosome 5, segment 1/4.    42  0.001  3
AZ625948|AZ625948.1 1M0465J21R Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC1M0465J21 R, DNA sequence.    44  0.003  2
BY671414|BY671414.1 Mus musculus 14.5 days embryo df/df Rathke's pouches cDNA, RIKEN full-length enriched library, clone:K820019J08, 3' end partial sequence.    42  0.006  2
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.          42  0.008  3
AC120722|AC120722.3 Rattus norvegicus clone CH230-264K20, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    54  0.012  2
AC110061|AC110061.1 Homo sapiens chromosome 15 clone CTD-3185H1 map 15, LOW-PASS SEQUENCE SAMPLING.    44  0.012  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q553V1) RecName: Full=Citrate synthase, mitochondrial;         ...   186   3e-46
AC116305_8(AC116305|pid:none) Dictyostelium discoideum chromosom...   184   6e-46
FN392319_422(FN392319|pid:none) Pichia pastoris GS115 chromosome...   108   6e-23
FM992695_315(FM992695|pid:none) Candida dubliniensis CD36 chromo...   108   8e-23
(P79024) RecName: Full=Citrate synthase, mitochondrial;         ...   107   1e-22
AY144810_1(AY144810|pid:none) Saccharomyces bayanus clone Contig...   105   4e-22
AF193854_1(AF193854|pid:none) Saccharomyces kluyveri putative ci...   105   6e-22
(P00890) RecName: Full=Citrate synthase, mitochondrial;         ...   105   6e-22
AY126274_1(AY126274|pid:none) Candida krusei citrate synthase (C...   103   1e-21
CP000502_263(CP000502|pid:none) Pichia stipitis CBS 6054 chromos...   103   2e-21

 psg: 0.76  gvh: 0.49  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.32  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 28.0 %: nuclear
	 20.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for VFC191 is cyt

>VFC191F.Seq
TTGGCCTACTGGAATTTATTTATTTATTCAAATATATATTATATTAAATAAAATGTTTGC
CAGATTAGCCAGGAGCTAACTACTTAAAGAATTCAGGTAGATACTTCTCTACTGAGCCAA
CCTTAAAAGAAAGATTAGTTCAAATCATCCCAGGTAAAATTGAACAAGTTAAACAATTAA
AAACTGAACATGGTGACAAAATCATTGGTACCTGTACTGTTGCACAAGCTTATGGTGGTA
TGAGATCAGTTAAATCATTAGTTACTGAAACATCATCATTAGATCCAGAAGAAGGCATTA
GATTCCGTGGTTTAACAATCCCAGAATGTCAAGAGAAATTACCAAAAGCT----------