>VFC168 (VFC168Q) /CSM/VF/VFC1-C/VFC168Q.Seq.d/
XXXXXXXXXXGATAGTGCTTTTAAAAATTTANAAAGATGTAATGATATGCTTGTAGATGA
CCCAANTTTTAGTACAAATAAAGTACATGAAGATAAATTGGATGATTATTTAAATGAATA
TAGAAGATTAAAAAAGAATATAAAATCAACATTAGAAAGTTTTGAACTATTGGAAGGTTC
AACATATAATAAAAATAAAGATACAGAAATACCAATGACAAGTTTATTGAGAGAACATTC
TACCCTTCAAAGTAGTTCCTATGTACAAGATTCAATATTGGGTCAAGCAAGACAAGCACA
TGAAGCTTTAGAAAATCAAAGAAGAATATTAAGAGGTACTTCTCATAAAATTAATACAAT
GCCAAGT

---SAFKNLXRCNDMLVDDPXFSTNKVHEDKLDDYLNEYRRLKKNIKSTLESFELLEGST
YNKNKDTEIPMTSLLREHSTLQSSSYVQDSILGQARQAHEALENQRRILRGTSHKINTMP
S

Frame A:
---ivllkixkdvmicl*mtqxlvqikymkinwmii*mnied*kri*nqh*kvlnywkvq
hiikikiqkyq*qvy*enilpfkvvpmykiqywvkqdkhmkl*kikeey*evllikliqc
q


Frame B:
---*cf*kfxkm**yacr*pxf*yk*st*r*ig*lfk*i*kikkeykinirkf*tigrfn
i**k*ryrntndkfiertfypsk*flctrfnigssktst*sfrkskknikryfs*n*yna
k


Frame C:
---SAFKNLXRCNDMLVDDPXFSTNKVHEDKLDDYLNEYRRLKKNIKSTLESFELLEGST
YNKNKDTEIPMTSLLREHSTLQSSSYVQDSILGQARQAHEALENQRRILRGTSHKINTMP
S

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFC168 (VFC168Q) /CSM/VF/VFC1-C/VFC168Q.Seq.d/                        696   0.0
FC-BE19 (FC-BE19Q) /CSM/FC/FC-BE/FC-BE19Q.Seq.d/                      642   0.0
SSF183 (SSF183Q) /CSM/SS/SSF1-D/SSF183Q.Seq.d/                         40   0.023
SSA513 (SSA513Q) /CSM/SS/SSA5-A/SSA513Q.Seq.d/                         40   0.023
AHO175 (AHO175Q) /CSM/AH/AHO1-D/AHO175Q.Seq.d/                         38   0.090
AHG750 (AHG750Q) /CSM/AH/AHG7-C/AHG750Q.Seq.d/                         38   0.090
SSI512 (SSI512Q) /CSM/SS/SSI5-A/SSI512Q.Seq.d/                         36   0.35
SSA717 (SSA717Q) /CSM/SS/SSA7-A/SSA717Q.Seq.d/                         36   0.35
SFL476 (SFL476Q) /CSM/SF/SFL4-D/SFL476Q.Seq.d/                         36   0.35
SFD195 (SFD195Q) /CSM/SF/SFD1-D/SFD195Q.Seq.d/                         36   0.35

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BM959029|BM959029.1 PLATE_10_F09_11.AB1 GS Lambda-Triplex, 10 day germinating spore library Glomus intraradices cDNA, mRNA sequence.    36  0.051  3
AC119033|AC119033.1 Homo sapiens chromosome X clone RP11-3I16, *** SEQUENCING IN PROGRESS ***, 41 unordered pieces.    48  0.076  1
AC112495|AC112495.2 Homo sapiens X BAC RP11-149B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    48  0.076  1
BZ011264|BZ011264.1 oei72c06.g1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    48  0.076  1
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.    32  0.084  10
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.          46  0.097  6
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    32  0.11  11
AC010594|AC010594.7 Homo sapiens chromosome 5 clone CTC-478B9, complete sequence.    36  0.25  4
AC103645|AC103645.6 Mus musculus, clone RP24-510J20, complete sequence.    34  0.26  4
AC124624|AC124624.3 Mus musculus clone RP23-417K9, WORKING DRAFT SEQUENCE, 5 unordered pieces.    34  0.27  7

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001328_97(CP001328|pid:none) Micromonas sp. RCC299 chromosome ...    50   2e-05
BT077698_1(BT077698|pid:none) Lepeophtheirus salmonis clone lsal...    50   2e-05
AK071820_1(AK071820|pid:none) Oryza sativa Japonica Group cDNA c...    49   5e-05
EU969670_1(EU969670|pid:none) Zea mays clone 333859 golgi SNARE ...    47   2e-04
BT065971_1(BT065971|pid:none) Zea mays full-length cDNA clone ZM...    47   2e-04
BT080027_1(BT080027|pid:none) Esox lucius clone eluc-evq-523-336...    45   6e-04
BT073636_1(BT073636|pid:none) Oncorhynchus mykiss clone omyk-evn...    45   6e-04
CP000590_331(CP000590|pid:none) Ostreococcus lucimarinus CCE9901...    45   6e-04
BT052356_1(BT052356|pid:none) Medicago truncatula clone MTYFD_FE...    45   8e-04
BC093179_1(BC093179|pid:none) Danio rerio golgi SNAP receptor co...    45   8e-04

 psg: 0.69  gvh: 0.37  alm: 0.62  top: 0.53  tms: 0.00  mit: 0.31  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 32.0 %: mitochondrial
	 20.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for VFC168 is cyt

>VFC168Z.Seq
----------GATAGTGCTTTTAAAAATTTANAAAGATGTAATGATATGCTTGTAGATGA
CCCAANTTTTAGTACAAATAAAGTACATGAAGATAAATTGGATGATTATTTAAATGAATA
TAGAAGATTAAAAAAGAATATAAAATCAACATTAGAAAGTTTTGAACTATTGGAAGGTTC
AACATATAATAAAAATAAAGATACAGAAATACCAATGACAAGTTTATTGAGAGAACATTC
TACCCTTCAAAGTAGTTCCTATGTACAAGATTCAATATTGGGTCAAGCAAGACAAGCACA
TGAAGCTTTAGAAAATCAAAGAAGAATATTAAGAGGTACTTCTCATAAAATTAATACAAT
GCCAAGT