>VFB843 (VFB843Q) /CSM/VF/VFB8-B/VFB843Q.Seq.d/
CAACATAAAAATCTTGGATTATTAGTTGGTTGGTGTGGTGATTCAATTATTTTTGAAAGT
TTTAAAGGTATGAATTCATTACATGACTTAATTCATAGGGATGGTTTAAAGATTGATATG
GCACTATTTATAAAGATAAGTAAGGACATTGCAAGCGTTATGGGATTATTACATTCAAAA
GATGTTGCACATGGTAATTTAACAAGTAGGTCCATTTATCTTGATAGATTTCAAATTGTA
AAAGTATCATTCCCAAAGTTGAATGCTACCGATTTAAATAATCCAGCCATTGAACCAAGA
TATATGGCACCGGAAATGACAAGAATGGAAGAGGATCAAATATCATGTTCAATCGATGTC
TATGCCTATGCCTTTGTTTTATGGGAGGCATTGACTTCGCATTTACCATTTAGAAAATTC
AATGATATCTCTGTGGCTGCCAAAGTCGCCTATGAAAATCTAAGACCAAAGATACCAACT
TCATGTCCATTGATCATCCGTAAACTAATTAATAGATGCTGGGCTCCTCTACCAAGTGAT
AGACCAACTTTCAATGATATCTTAAAXXXXXXXXXX

QHKNLGLLVGWCGDSIIFESFKGMNSLHDLIHRDGLKIDMALFIKISKDIASVMGLLHSK
DVAHGNLTSRSIYLDRFQIVKVSFPKLNATDLNNPAIEPRYMAPEMTRMEEDQISCSIDV
YAYAFVLWEALTSHLPFRKFNDISVAAKVAYENLRPKIPTSCPLIIRKLINRCWAPLPSD
RPTFNDIL---

Frame A:
QHKNLGLLVGWCGDSIIFESFKGMNSLHDLIHRDGLKIDMALFIKISKDIASVMGLLHSK
DVAHGNLTSRSIYLDRFQIVKVSFPKLNATDLNNPAIEPRYMAPEMTRMEEDQISCSIDV
YAYAFVLWEALTSHLPFRKFNDISVAAKVAYENLRPKIPTSCPLIIRKLINRCWAPLPSD
RPTFNDIL---


Frame B:
nikildy*lvgvviqlflkvlkv*ihymt*figmv*rliwhyl*r*vrtlqalwdyyiqk
mlhmvi*qvgpfilidfkl*kyhsqs*mlpi*iiqplnqdiwhrk*qewkrikyhvqsms
mpmplfygrh*lriyhlensmislwlpkspmki*dqryqlhvh*ssvn*lidagllyqvi
dqlsmis*---


Frame C:
t*kswiiswlvw*fnyf*kf*ryefit*lns*gwfkd*ygtiykdk*ghckrygiitfkr
cctw*fnk*vhls**isncksiipkvecyrfk*ssh*tkiygtgndkngrgsnimfnrcl
clclcfmggidfafti*kiq*ylcgcqsrl*ksktkdtnfmsidhp*tn**mlgsstk**
tnfq*yl---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFB843 (VFB843Q) /CSM/VF/VFB8-B/VFB843Q.Seq.d/                       1122   0.0
SFD291 (SFD291Q) /CSM/SF/SFD2-D/SFD291Q.Seq.d/                       1116   0.0
VSJ617 (VSJ617Q) /CSM/VS/VSJ6-A/VSJ617Q.Seq.d/                       1108   0.0
CFK442 (CFK442Q) /CSM/CF/CFK4-B/CFK442Q.Seq.d/                        870   0.0
SFJ737 (SFJ737Q) /CSM/SF/SFJ7-B/SFJ737Q.Seq.d/                        769   0.0
CHK524 (CHK524Q) /CSM/CH/CHK5-A/CHK524Q.Seq.d/                        117   2e-25
SLE634 (SLE634Q) /CSM/SL/SLE6-B/SLE634Q.Seq.d/                         40   0.036
VFN520 (VFN520Q) /CSM/VF/VFN5-A/VFN520Q.Seq.d/                         38   0.14
SSI149 (SSI149Q) /CSM/SS/SSI1-C/SSI149Q.Seq.d/                         36   0.57
VHF332 (VHF332Q) /CSM/VH/VHF3-B/VHF332Q.Seq.d/                         34   2.2

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

U64830|U64830.1 Dictyostelium discoideum AX2 protein tyrosine kinase gene, complete cds.  1114  0.0  1
U01064|U01064.1 Dictyostelium discoideum AX2 protein tyrosine kinase mRNA, partial cds.   488  e-134  1
AC125592|AC125592.3 Rattus norvegicus clone CH230-9G23, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.    44  1.9  1
AC093226|AC093226.1 Homo sapiens chromosome 5 clone CTD-2330E4, WORKING DRAFT SEQUENCE, 20 unordered pieces.    44  1.9  1
BX323033|BX323033.4 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone DKEYP-63D11.    36  2.6  3
AC116557|AC116557.28 Mus musculus clone rp23-239f10 map 8 strain C57BL/6J, WORKING DRAFT SEQUENCE, 2 ordered pieces.    38  4.2  3
AC128294|AC128294.3 Rattus norvegicus clone CH230-176H20, WORKING DRAFT SEQUENCE, 1 ordered piece.    44  4.8  2
U41550|U41550.1 Caenorhabditis elegans cosmid R04A9, complete sequence.    40  5.2  2
AC117559|AC117559.3 Mus musculus clone RP24-170C14, WORKING DRAFT SEQUENCE, 4 unordered pieces.    40  5.4  3
AC134993|AC134993.2 Rattus norvegicus clone CH230-376C16, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.    42  6.0  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54I36) RecName: Full=Dual specificity protein kinase dpyk3;   ...   384   e-106
T18287(T18287) protein-tyrosine kinase (EC 2.7.1.112) - slime mo...   383   e-105
U01064_1(U01064|pid:none) Dictyostelium discoideum AX2 protein t...   172   4e-42
B35670(B35670) protein-tyrosine kinase (EC 2.7.1.112) 2 - slime ...   105   9e-22
AP002845_6(AP002845|pid:none) Oryza sativa Japonica Group genomi...   104   2e-21
BT064057_1(BT064057|pid:none) Zea mays full-length cDNA clone ZM...   103   3e-21
BT033919_1(BT033919|pid:none) Zea mays full-length cDNA clone ZM...   103   3e-21
FB830010_1(FB830010|pid:none) Sequence 49283 from Patent WO20080...   103   3e-21
(Q55GU0) RecName: Full=Probable serine/threonine-protein kinase ...   102   6e-21
AK221724_1(AK221724|pid:none) Arabidopsis thaliana mRNA for puta...   102   1e-20

 psg: 0.93  gvh: 0.50  alm: 0.38  top: 0.33  tms: 0.00  mit: 0.11  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall
	  4.0 %: mitochondrial
	  4.0 %: endoplasmic reticulum

>> prediction for VFB843 is cyt

>VFB843F.Seq
CAACATAAAAATCTTGGATTATTAGTTGGTTGGTGTGGTGATTCAATTATTTTTGAAAGT
TTTAAAGGTATGAATTCATTACATGACTTAATTCATAGGGATGGTTTAAAGATTGATATG
GCACTATTTATAAAGATAAGTAAGGACATTGCAAGCGTTATGGGATTATTACATTCAAAA
GATGTTGCACATGGTAATTTAACAAGTAGGTCCATTTATCTTGATAGATTTCAAATTGTA
AAAGTATCATTCCCAAAGTTGAATGCTACCGATTTAAATAATCCAGCCATTGAACCAAGA
TATATGGCACCGGAAATGACAAGAATGGAAGAGGATCAAATATCATGTTCAATCGATGTC
TATGCCTATGCCTTTGTTTTATGGGAGGCATTGACTTCGCATTTACCATTTAGAAAATTC
AATGATATCTCTGTGGCTGCCAAAGTCGCCTATGAAAATCTAAGACCAAAGATACCAACT
TCATGTCCATTGATCATCCGTAAACTAATTAATAGATGCTGGGCTCCTCTACCAAGTGAT
AGACCAACTTTCAATGATATCTTAAA----------