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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
AFM191
Library AF
(Link to library)
Clone ID AFM191
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig -
Original site URL
Representative seq. ID AFM191P
(Link to Original site)
Representative DNA sequence 
>AFM191 (AFM191Q) /CSM/AF/AFM1-D/AFM191Q.Seq.d/
ATTTTCTATTTTCTTTTTATAATAAAAAAAAATGAATGAAAATGATAATAATTTAGAGAA
TGAAACAGGATTTTCAGGTAGATTAATTGTTGTTTCAAATAGATTACCAGTATCAATTAA
AAAGGAATCAAATGGTAAATGGAGTTGTAAGATGAGTAGTGGAGGTTTGGTAGCAGCATT
ATCAGGGTTAAAATCAAATTTTATATGGGTAGGATGGATTGGAGCAGAGATTGAAGAAGA
TGATCGAAAAGAGATTAAAGAATTACTTTGGAAAGATTATAGTTGTATACCAGTATTCCT
CTCGGAAAAGGTTGCCAATGAACATTACAATGGATTCTCAAATGGAGTACTTTGGCCATT
ATTTCATTATTTACCAGGAGATCTCGATTATGATGATAGAATTTGGAATTCCTATGTGGA
AGCAAATGAACAATTCTCAAGTGTAGTTGCAGAGATATTGAAGCCAAATGATTTAGTATG
GGTACACGATTATCATATGATGTTATTACCAGAGATATTAAAACAAAAGAAACCAGATGC
AAGAATTGGGTTCTTTCTACACATTCCATTTCCATCATCAGAGATCTTTCGTGTATTGCC
ATGTCGTAAAGAGXXXXXXXXXXAATTAAGTAGACCATCTCAAGAATTATTAAATAGTTT
TGATATACTTTCCAAATGATCCAAAAACTGACGTATACATATTGAGTGGTCGTGATAAGA
AAACTCTTAGTGAATGGTTTTTGGGTATTCAGATTGGTTTATCAGCAGAATATGGTTGTT
TCTTTAAATTACCAGAATCAACTGAATGGGAACAACAAGTTCCATCAATGGATTTAAGTT
GGAAAGAAACTATTCGTCCACTCTTTAAATATTTCACTCTTCGTACTCCAGGTTCTTTCT
TTGAAGAAAAAGAAATGTTATTCACATGGCATTATAGAAATGCTGATCCAATATTTGGTT
CAATTCAAGCACGTGAATTACATTTACATTTAGATAATTTACCTTTAGATGTTATAGTTG
GTGATAAAACATTGGGTGTAAGATCATATAATATAAATCCATTATCCTCAATGAAAAAAG
TTATAACAGACACAATTCCAAAAGGATTAGATTTAATTTTATTAATTGGTGATACTCATA
TTCATCCAAGTGAATTGCCAACATTTGATGGTAAAATCTTTAATATTTCAGTTGGTAAAA
AATCTGTTAAAGATAGTTACCATTTAAGTGATCCAGCTGAAGTTAATTATCTTTTAAATA
GATTAGAAAAAATTTCAAAAGATGAATCATGTGCTCCTGTACCNATAATTAATTTGTTTA
TCAAAATAAAAATAAAAATTATAAATAGAATGAATAAATA
sequence update 2009. 4. 3
Translated Amino Acid sequence 
fsiffl**KKMNENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAAL
SGLKSNFIWVGWIGAEIEEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPL
FHYLPGDLDYDDRIWNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDA
RIGFFLHIPFPSSEIFRVLPCRKE---

---LSRPSQELLNSFDILSK*skn*rihiews**ens**mvfgysdwfisriwlfl*itr
in*mgttssingfklernysstl*ifhssysrffl*rkrnvihmal*kc*sniwfnsst*
itftfr*ftfrcysw**nigckii*yksiilneksynrhnskrirfnfinw*ysyssk*i
ani*w*nl*yfsw*kic*r*lpfk*ss*s*lsfk*irknfkr*imcsctxn*fvyqnknk
nyk*ne*i
Translated Amino Acid sequence (All Frames) 
Frame A:
ifyflfiikkne*k***fre*nrifr*inccfk*itsin*kgikw*mel*de*wrfgssi
irvkikfymgrmdwsrd*rr*skrd*ritlerl*lytsiplgkgcq*tlqwilkwstlai
islftrrsrl***nleflcgsk*tilkcscrdieak*fsmgtrlsydvitrdiktketrc
knwvlsthsisiirdlsciams*r---

---n*vdhlkny*ivliyfpndpktdvyilsgrdkktlsewflgiqiglsaeygcffklp
esteweqqvpsmdlswketirplfkyftlrtpgsffeekemlftwhyrnadpifgsiqar
elhlhldnlpldvivgdktlgvrsyninplssmkkvitdtipkgldlilligdthihpse
lptfdgkifnisvgkksvkdsyhlsdpaevnyllnrlekiskdescapvpiinlfikiki
kiinrmnk

Frame B:
fsiffl**KKMNENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAAL
SGLKSNFIWVGWIGAEIEEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPL
FHYLPGDLDYDDRIWNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDA
RIGFFLHIPFPSSEIFRVLPCRKE---

---ik*tisriik*f*ytfqmiqkltyty*vvvirkllvngfwvfrlvyqqnmvvslnyq
nqlngnnkfhqwi*vgkklfvhslnislfvlqvlslkkkkcyshgiiemliqylvqfkhv
nyiyi*iiyl*ml*lvikhwv*dhii*ihypq*kkl*qtqfqkd*i*fy*lvilifiqvn
cqhlmvkslifqlvknllkivti*viqlkliif*id*kkfqkmnhvllyx*liclsk*k*
kl*ie*in

Frame C:
flfsfynkkk*mkmiii*rmkqdfqvd*llfqidyqyqlkrnqmvngvvr*vvevw*qhy
qg*nqilyg*dgleqrlkkmiekrlknyfgkiivvyqyssrkrlpmnitmdsqmeyfghy
fiiyqeisimmiefgipmwkqmnnsqv*lqry*sqmi*ygytiii*cyyqry*nkrnqmq
elgsfytfhfhhqrsfvychvvk---

---LSRPSQELLNSFDILSK*skn*rihiews**ens**mvfgysdwfisriwlfl*itr
in*mgttssingfklernysstl*ifhssysrffl*rkrnvihmal*kc*sniwfnsst*
itftfr*ftfrcysw**nigckii*yksiilneksynrhnskrirfnfinw*ysyssk*i
ani*w*nl*yfsw*kic*r*lpfk*ss*s*lsfk*irknfkr*imcsctxn*fvyqnknk
nyk*ne*i
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFM191 (AFM191Q) /CSM/AF/AFM1-D/AFM191Q.Seq.d/                       2502   0.0
AHF706 (AHF706Q) /CSM/AH/AHF7-A/AHF706Q.Seq.d/                       1366   0.0
SFE543 (SFE543Q) /CSM/SF/SFE5-B/SFE543Q.Seq.d/                       1364   0.0
CHH245 (CHH245Q) /CSM/CH/CHH2-B/CHH245Q.Seq.d/                       1364   0.0
CHE837 (CHE837Q) /CSM/CH/CHE8-B/CHE837Q.Seq.d/                       1364   0.0
AHJ617 (AHJ617Q) /CSM/AH/AHJ6-A/AHJ617Q.Seq.d/                       1358   0.0
VHI354 (VHI354Q) /CSM/VH/VHI3-C/VHI354Q.Seq.d/                       1350   0.0
SHK718 (SHK718Q) /CSM/SH/SHK7-A/SHK718Q.Seq.d/                       1350   0.0
CHR506 (CHR506Q) /CSM/CH/CHR5-A/CHR506Q.Seq.d/                       1350   0.0
CHL450 (CHL450Q) /CSM/CH/CHL4-C/CHL450Q.Seq.d/                       1350   0.0
own update 2009. 4. 3
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ346999) Dictyostelium discoideum cDNA clone:dda25e23, 3' ...  1380   0.0    1
(BJ351130) Dictyostelium discoideum cDNA clone:dda42l01, 3' ...  1348   0.0    2
(BJ353387) Dictyostelium discoideum cDNA clone:dda50a06, 3' ...  1340   0.0    2
(BJ397940) Dictyostelium discoideum cDNA clone:dds10e11, 3' ...  1283   0.0    2
(BJ379899) Dictyostelium discoideum cDNA clone:ddc36i12, 3' ...  1283   0.0    2
(BJ378270) Dictyostelium discoideum cDNA clone:ddc31j10, 3' ...  1283   0.0    2
(BJ349795) Dictyostelium discoideum cDNA clone:dda37m14, 3' ...  1259   0.0    2
(BJ441726) Dictyostelium discoideum cDNA clone:ddv47l13, 3' ...  1251   0.0    3
(BJ408201) Dictyostelium discoideum cDNA clone:dds45d05, 3' ...  1251   0.0    3
(BJ386094) Dictyostelium discoideum cDNA clone:ddc57k01, 3' ...  1251   0.0    3
dna update 2009. 4. 9
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54K57) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ...   400   e-113
CR380956_419(CR380956|pid:none) Candida glabrata strain CBS138 c...   206   1e-51
CP000496_558(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...   204   7e-51
(Q92410) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ...   203   1e-50
FM992695_507(FM992695|pid:none) Candida dubliniensis CD36 chromo...   203   1e-50
(Q00075) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ...   201   4e-50
AM270183_12(AM270183|pid:none) Aspergillus niger contig An08c028...   201   4e-50
(O74932) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ...   201   6e-50
T46564(T46564) alpha,alpha-trehalose-phosphate synthase (UDP-for...   199   1e-49
AM920437_202(AM920437|pid:none) Penicillium chrysogenum Wisconsi...   198   3e-49
protein update 2009. 4. 5
PSORT 

 psg: 0.00  gvh: 0.00  alm: 0.00  top: 0.00  tms: 0.00  mit: 0.00  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	100.0 %: 

>> prediction for AFM191 is

5' end seq. ID AFM191F
5' end seq. 
>AFM191F.Seq
ATTTTCTATTTTCTTTTTATAATAAAAAAAAATGAATGAAAATGATAATAATTTAGAGAA
TGAAACAGGATTTTCAGGTAGATTAATTGTTGTTTCAAATAGATTACCAGTATCAATTAA
AAAGGAATCAAATGGTAAATGGAGTTGTAAGATGAGTAGTGGAGGTTTGGTAGCAGCATT
ATCAGGGTTAAAATCAAATTTTATATGGGTAGGATGGATTGGAGCAGAGATTGAAGAAGA
TGATCGAAAAGAGATTAAAGAATTACTTTGGAAAGATTATAGTTGTATACCAGTATTCCT
CTCGGAAAAGGTTGCCAATGAACATTACAATGGATTCTCAAATGGAGTACTTTGGCCATT
ATTTCATTATTTACCAGGAGATCTCGATTATGATGATAGAATTTGGAATTCCTATGTGGA
AGCAAATGAACAATTCTCAAGTGTAGTTGCAGAGATATTGAAGCCAAATGATTTAGTATG
GGTACACGATTATCATATGATGTTATTACCAGAGATATTAAAACAAAAGAAACCAGATGC
AAGAATTGGGTTCTTTCTACACATTCCATTTCCATCATCAGAGATCTTTCGTGTATTGCC
ATGTCGTAAAGAGXXXXXXXXXX
Length of 5' end seq. 623
3' end seq. ID AFM191Z
3' end seq. 
>AFM191Z.Seq
XXXXXXXXXXAATTAAGTAGACCATCTCAAGAATTATTAAATAGTTTTGATATACTTTCC
AAATGATCCAAAAACTGACGTATACATATTGAGTGGTCGTGATAAGAAAACTCTTAGTGA
ATGGTTTTTGGGTATTCAGATTGGTTTATCAGCAGAATATGGTTGTTTCTTTAAATTACC
AGAATCAACTGAATGGGAACAACAAGTTCCATCAATGGATTTAAGTTGGAAAGAAACTAT
TCGTCCACTCTTTAAATATTTCACTCTTCGTACTCCAGGTTCTTTCTTTGAAGAAAAAGA
AATGTTATTCACATGGCATTATAGAAATGCTGATCCAATATTTGGTTCAATTCAAGCACG
TGAATTACATTTACATTTAGATAATTTACCTTTAGATGTTATAGTTGGTGATAAAACATT
GGGTGTAAGATCATATAATATAAATCCATTATCCTCAATGAAAAAAGTTATAACAGACAC
AATTCCAAAAGGATTAGATTTAATTTTATTAATTGGTGATACTCATATTCATCCAAGTGA
ATTGCCAACATTTGATGGTAAAATCTTTAATATTTCAGTTGGTAAAAAATCTGTTAAAGA
TAGTTACCATTTAAGTGATCCAGCTGAAGTTAATTATCTTTTAAATAGATTAGAAAAAAT
TTCAAAAGATGAATCATGTGCTCCTGTACCNATAATTAATTTGTTTATCAAAATAAAAAT
AAAAATTATAAATAGAATGAATAAATA
Length of 3' end seq. 747
Connected seq. ID AFM191P
Connected seq. 
>AFM191P.Seq
ATTTTCTATTTTCTTTTTATAATAAAAAAAAATGAATGAAAATGATAATAATTTAGAGAA
TGAAACAGGATTTTCAGGTAGATTAATTGTTGTTTCAAATAGATTACCAGTATCAATTAA
AAAGGAATCAAATGGTAAATGGAGTTGTAAGATGAGTAGTGGAGGTTTGGTAGCAGCATT
ATCAGGGTTAAAATCAAATTTTATATGGGTAGGATGGATTGGAGCAGAGATTGAAGAAGA
TGATCGAAAAGAGATTAAAGAATTACTTTGGAAAGATTATAGTTGTATACCAGTATTCCT
CTCGGAAAAGGTTGCCAATGAACATTACAATGGATTCTCAAATGGAGTACTTTGGCCATT
ATTTCATTATTTACCAGGAGATCTCGATTATGATGATAGAATTTGGAATTCCTATGTGGA
AGCAAATGAACAATTCTCAAGTGTAGTTGCAGAGATATTGAAGCCAAATGATTTAGTATG
GGTACACGATTATCATATGATGTTATTACCAGAGATATTAAAACAAAAGAAACCAGATGC
AAGAATTGGGTTCTTTCTACACATTCCATTTCCATCATCAGAGATCTTTCGTGTATTGCC
ATGTCGTAAAGAG----------AATTAAGTAGACCATCTCAAGAATTATTAAATAGTTT
TGATATACTTTCCAAATGATCCAAAAACTGACGTATACATATTGAGTGGTCGTGATAAGA
AAACTCTTAGTGAATGGTTTTTGGGTATTCAGATTGGTTTATCAGCAGAATATGGTTGTT
TCTTTAAATTACCAGAATCAACTGAATGGGAACAACAAGTTCCATCAATGGATTTAAGTT
GGAAAGAAACTATTCGTCCACTCTTTAAATATTTCACTCTTCGTACTCCAGGTTCTTTCT
TTGAAGAAAAAGAAATGTTATTCACATGGCATTATAGAAATGCTGATCCAATATTTGGTT
CAATTCAAGCACGTGAATTACATTTACATTTAGATAATTTACCTTTAGATGTTATAGTTG
GTGATAAAACATTGGGTGTAAGATCATATAATATAAATCCATTATCCTCAATGAAAAAAG
TTATAACAGACACAATTCCAAAAGGATTAGATTTAATTTTATTAATTGGTGATACTCATA
TTCATCCAAGTGAATTGCCAACATTTGATGGTAAAATCTTTAATATTTCAGTTGGTAAAA
AATCTGTTAAAGATAGTTACCATTTAAGTGATCCAGCTGAAGTTAATTATCTTTTAAATA
GATTAGAAAAAATTTCAAAAGATGAATCATGTGCTCCTGTACCNATAATTAATTTGTTTA
TCAAAATAAAAATAAAAATTATAAATAGAATGAATAAATA
Length of connected seq. 1350
Full length Seq ID -
Full length Seq. -
Length of full length seq. -