>SSM811 (SSM811Q) /CSM/SS/SSM8-A/SSM811Q.Seq.d/
AAAGATAATGACGGTAAGGTCTCAGTTGAAGATATTGGAGCTTGTTTAAGATCATTAGGT
AAAAGCCCAACCATGGCAGATATTGAAGCATTAAAGACTGAAATTGGTGCTAAAGAATTT
GATATCAATACATTAAAGAGCATTTACAAGAAACCAAACATTAAAACTCCACAAGAGCAA
CAAAAGGAAATGTTAGATGCATTCAAAGCCCTCGATAAAGAAGGCCATGGTACCATTCAA
GGTGCTGAATTACGTCAATTATTAACCACTCTTGGTGATTACTTATCAACCGCTGAAGTT
GATGAATTATTTAAGGAAATCTCTGTCGATAGTACTACTGGTGCCGTTTCATATGCAAGC
TTAGTCAATACCATCGTTTCTGGTTATCCATTAGGCGGTTTCTAAATTATTATTATAT

KDNDGKVSVEDIGACLRSLGKSPTMADIEALKTEIGAKEFDINTLKSIYKKPNIKTPQEQ
QKEMLDAFKALDKEGHGTIQGAELRQLLTTLGDYLSTAEVDELFKEISVDSTTGAVSYAS
LVNTIVSGYPLGGF*iiii

Frame A:
KDNDGKVSVEDIGACLRSLGKSPTMADIEALKTEIGAKEFDINTLKSIYKKPNIKTPQEQ
QKEMLDAFKALDKEGHGTIQGAELRQLLTTLGDYLSTAEVDELFKEISVDSTTGAVSYAS
LVNTIVSGYPLGGF*iiii


Frame B:
kimtvrsqlkilelv*dh*vkaqpwqilkh*rlklvlknlisih*raftrnqtlklhksn
krkc*mhskpsikkamvpfkvlnyvny*pllvityqplklmnylrkslsivllvpfhmqa
*sipsflvih*avskllly


Frame C:
r**r*gls*rywslfkiir*kpnhgry*sikd*nwc*ri*yqyikehlqetkh*nstrat
kgnvrciqspr*rrpwyhsrc*itsiinhsw*llinr*s**ii*gnlcr*yywcrfickl
sqyhrfwlsirrflnyyy

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSD769 (VSD769Q) /CSM/VS/VSD7-C/VSD769Q.Seq.d/                        829   0.0
VSD135 (VSD135Q) /CSM/VS/VSD1-B/VSD135Q.Seq.d/                        829   0.0
VSB729 (VSB729Q) /CSM/VS/VSB7-B/VSB729Q.Seq.d/                        829   0.0
SSM811 (SSM811Q) /CSM/SS/SSM8-A/SSM811Q.Seq.d/                        829   0.0
SSM265 (SSM265Q) /CSM/SS/SSM2-C/SSM265Q.Seq.d/                        829   0.0
SSL189 (SSL189Q) /CSM/SS/SSL1-D/SSL189Q.Seq.d/                        829   0.0
SSK774 (SSK774Q) /CSM/SS/SSK7-D/SSK774Q.Seq.d/                        829   0.0
SSJ645 (SSJ645Q) /CSM/SS/SSJ6-B/SSJ645Q.Seq.d/                        829   0.0
SSI416 (SSI416Q) /CSM/SS/SSI4-A/SSI416Q.Seq.d/                        829   0.0
SSF158 (SSF158Q) /CSM/SS/SSF1-C/SSF158Q.Seq.d/                        829   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

X54161|X54161.1 D.discoideum myosin essential light chain gene.   829  0.0  1
M19337|M19337.1 D.discoideum myosin light chain mRNA, complete cds.   771  0.0  1
AC025591|AC025591.8 Staphylococcus aureus clone sabac-134, complete sequence.    40  1.3  5
C97784|C97784.1 Oryza sativa cDNA, partial sequence (C62862_2A).    32  1.5  2
AL050329|AL050329.12 Human DNA sequence from clone RP1-22I17 on chromosome 6q11.1-12.  Contains the 3' end of the gene KIAA0244, the 3' end of the gene for a novel protein with EGF-like and laminin G domains, ESTs, STSs and  GSSs.    40  4.2  2
AC074318|AC074318.5 Staphylococcus aureus clone sabac-108, WORKING DRAFT SEQUENCE, 1 ordered pieces.    40  5.0  4
AL356788|AL356788.6 Human DNA sequence from clone RP11-308L13 on chromosome 1.    38  5.2  2
AC111895|AC111895.4 Rattus norvegicus clone CH230-55F3, *** SEQUENCING IN PROGRESS ***, 16 unordered pieces.    42  5.3  1
AL590875|AL590875.9 Human DNA sequence *** SEQUENCING CANCELLED *** from clone  RP11-671P4.    42  5.3  1
CA966909|CA966909.1 CcLL10a35h18f1 Carp liver library 5 Cyprinus carpio cDNA clone 35h18 5', mRNA sequence.    42  5.3  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P09402) RecName: Full=Myosin, essential light chain; AltName: F...   263   1e-69
A28127(A28127;B48404;A48404;S20728) myosin light chain, nonmuscl...   255   4e-67
A29910(A29910)myosin calcium-binding light chain - slime mold (P...   168   6e-41
(P08053) RecName: Full=Myosin regulatory light chain; AltName: F...   167   1e-40
J03499_1(J03499|pid:none) Physarum polycephalum myosin calcium-b...   167   1e-40
CR382133_531(CR382133|pid:none) Debaryomyces hansenii strain CBS...    90   2e-17
CP000497_44(CP000497|pid:none) Pichia stipitis CBS 6054 chromoso...    90   3e-17
DQ122882_1(DQ122882|pid:none) Chlamydomonas incerta calmodulin m...    86   3e-16
(P04352) RecName: Full=Calmodulin;          Short=CaM;  &M20729_...    86   3e-16
NRL(1CLM) calmodulin - Paramecium tetraurelia                          86   4e-16

 psg: 0.75  gvh: 0.47  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SSM811 is cyt

>SSM811E.Seq
AAAGATAATGACGGTAAGGTCTCAGTTGAAGATATTGGAGCTTGTTTAAGATCATTAGGT
AAAAGCCCAACCATGGCAGATATTGAAGCATTAAAGACTGAAATTGGTGCTAAAGAATTT
GATATCAATACATTAAAGAGCATTTACAAGAAACCAAACATTAAAACTCCACAAGAGCAA
CAAAAGGAAATGTTAGATGCATTCAAAGCCCTCGATAAAGAAGGCCATGGTACCATTCAA
GGTGCTGAATTACGTCAATTATTAACCACTCTTGGTGATTACTTATCAACCGCTGAAGTT
GATGAATTATTTAAGGAAATCTCTGTCGATAGTACTACTGGTGCCGTTTCATATGCAAGC
TTAGTCAATACCATCGTTTCTGGTTATCCATTAGGCGGTTTCTAAATTATTATTATAT