>SSM746 (SSM746Q) /CSM/SS/SSM7-B/SSM746Q.Seq.d/
XXXXXXXXXXATGGACGGTGATATTTTTAAGGCATCACAGGCAGCTGGTGTTTTGTGTTC
AACAGTTGATCTGGACCATGATGGTAAATTCACATATCAAGAAATTGCTAAGTATTGTGC
AGACGAGGCAAAAAAAAAATGTTGAACAAAATGCTGAGATTGCTGCATTGGCTGATGTTG
AAGCTATGTTATTAAGATTTGATAAAGATAAGGATAAAAAATTAACCAAAACAGAATTTG
TTGAATACTTTAAGGGAAATGGCCATACTCCATACTCTGATCGTGATCAAGTTCTTAAAA
TTATTGACTTGGATAAAGACGGATGTGTTTCTGCAAATGAATTACAAGAATGGTTCAAAA
AAAGAAGAATTGATTACGCAAGAATGGTTTCTGCAAGAGGTCCAAATTGTTAAATTCTCT
TGGGACATAATACCACATTAATCTTATTTTATAAGGTTTTAAAGTTTGGTACATAAAAAA
AAAAAAAAATTAAATAAATATTCAATTTCTTTAAATGAAGTTATTAATTATATTTATTTT
AAGGAAAAA

---WTVIFLRHHRQLVFCVQQLIWTMMVNSHIKKLLSIVQTRQKKNVEQNAEIAALADVE
AMLLRFDKDKDKKLTKTEFVEYFKGNGHTPYSDRDQVLKIIDLDKDGCVSANELQEWFKK
RRIDYARMVSARGPNC*illghnttlilfykvlkfgt*kkkkik*ifnffk*sy*lylf*
gk

Frame A:
---WTVIFLRHHRQLVFCVQQLIWTMMVNSHIKKLLSIVQTRQKKNVEQNAEIAALADVE
AMLLRFDKDKDKKLTKTEFVEYFKGNGHTPYSDRDQVLKIIDLDKDGCVSANELQEWFKK
RRIDYARMVSARGPNC*illghnttlilfykvlkfgt*kkkkik*ifnffk*sy*lylf*
gk


Frame B:
---gr*yf*gitgswcfvfns*sgp*w*ihisrnc*vlcrrgkkkmlnkmlrllhwlmlk
lcy*dlikirikn*pkqnllntlremailhtlivikflklltwiktdvflqmnykngskk
eelitqewflqevqivkfswdiiph*syfirf*slvhkkkkklnkysislnevinyiyfk
ek


Frame C:
---dgdifkasqaagvlcstvdldhdgkftyqeiakycadeakkkc*tkc*dccig*c*s
yviki**r*g*kinqnric*il*gkwpysil*s*sss*ny*lg*rrmcfck*itrmvqkk
kn*lrkngfckrskllnslgt*yhinlil*gfkvwyikkkkn*iniqfl*mklliifilr
k

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM746 (SSM746Q) /CSM/SS/SSM7-B/SSM746Q.Seq.d/                        819   0.0
SSK474 (SSK474Q) /CSM/SS/SSK4-D/SSK474Q.Seq.d/                        811   0.0
SSL518 (SSL518Q) /CSM/SS/SSL5-A/SSL518Q.Seq.d/                        801   0.0
SSK806 (SSK806Q) /CSM/SS/SSK8-A/SSK806Q.Seq.d/                        801   0.0
SSK301 (SSK301Q) /CSM/SS/SSK3-A/SSK301Q.Seq.d/                        801   0.0
SSJ865 (SSJ865Q) /CSM/SS/SSJ8-C/SSJ865Q.Seq.d/                        801   0.0
SSC631 (SSC631Q) /CSM/SS/SSC6-B/SSC631Q.Seq.d/                        801   0.0
SSA837 (SSA837Q) /CSM/SS/SSA8-B/SSA837Q.Seq.d/                        801   0.0
SSA505 (SSA505Q) /CSM/SS/SSA5-A/SSA505Q.Seq.d/                        801   0.0
SSI112 (SSI112Q) /CSM/SS/SSI1-A/SSI112Q.Seq.d/                        795   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AB070448|AB070448.1 Dictyostelium discoideum cbpF mRNA for calcium binding protein CBP6, complete cds, clone:SSA631.   430  0.0  3
AB070449|AB070449.1 Dictyostelium discoideum cbpG mRNA for calcium binding protein CBP7, complete cds, clone:SSM207.   244  e-127  4
AF076972|AF076972.1 Dictyostelium discoideum calcium-binding protein mRNA, complete cds.   176  7e-97  6
AX344564|AX344564.1 Sequence 15 from Patent WO0200932.            38  0.007  7
AX251778|AX251778.1 Sequence 39 from Patent WO0168911.            32  0.042  4
AC110731|AC110731.4 Mus musculus clone RP23-433J5, WORKING DRAFT SEQUENCE, 8 ordered pieces.    40  0.050  5
AL645765|AL645765.2 Human DNA sequence *** SEQUENCING CANCELLED *** from clone  RP11-78I19.    36  0.14  4
AC099023|AC099023.1 Drosophila melanogaster, chromosome 2R, region 56X-57A, BAC clone BACR48L22, complete sequence.    42  0.16  5
AL354929|AL354929.8 Human DNA sequence from clone RP11-189O8 on chromosome 1.    36  0.26  3
AC125407|AC125407.2 Mus musculus chromosome UNK clone RP23-94F17, WORKING DRAFT SEQUENCE, 14 unordered pieces.    44  0.30  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54QT9) RecName: Full=Calcium-binding protein F; AltName: Full=...   174   8e-62
(Q54QU0) RecName: Full=Calcium-binding protein F-like; AltName: ...   156   6e-53
(Q54QT7) RecName: Full=Calcium-binding protein C; AltName: Full=...   132   3e-42
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    36   0.58
(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    35   1.7
AJ719335_1(AJ719335|pid:none) Gallus gallus mRNA for hypothetica...    34   2.2
CP001186_4737(CP001186|pid:none) Bacillus cereus G9842, complete...    34   2.8
AM494965_309(AM494965|pid:none) Leishmania braziliensis chromoso...    34   2.9
BC071338_1(BC071338|pid:none) Danio rerio zgc:86646, mRNA (cDNA ...    33   3.7
CP000001_4429(CP000001|pid:none) Bacillus cereus E33L, complete ...    33   4.8

 psg: 0.90  gvh: 0.49  alm: 0.43  top: 0.60  tms: 0.00  mit: 0.48  mip: 0.07
 nuc: 0.04  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: mitochondrial
	 16.0 %: cytoplasmic
	 16.0 %: nuclear
	  4.0 %: cytoskeletal

>> prediction for SSM746 is mit

>SSM746Z.Seq
----------ATGGACGGTGATATTTTTAAGGCATCACAGGCAGCTGGTGTTTTGTGTTC
AACAGTTGATCTGGACCATGATGGTAAATTCACATATCAAGAAATTGCTAAGTATTGTGC
AGACGAGGCAAAAAAAAAATGTTGAACAAAATGCTGAGATTGCTGCATTGGCTGATGTTG
AAGCTATGTTATTAAGATTTGATAAAGATAAGGATAAAAAATTAACCAAAACAGAATTTG
TTGAATACTTTAAGGGAAATGGCCATACTCCATACTCTGATCGTGATCAAGTTCTTAAAA
TTATTGACTTGGATAAAGACGGATGTGTTTCTGCAAATGAATTACAAGAATGGTTCAAAA
AAAGAAGAATTGATTACGCAAGAATGGTTTCTGCAAGAGGTCCAAATTGTTAAATTCTCT
TGGGACATAATACCACATTAATCTTATTTTATAAGGTTTTAAAGTTTGGTACATAAAAAA
AAAAAAAAATTAAATAAATATTCAATTTCTTTAAATGAAGTTATTAATTATATTTATTTT
AAGGAAAAA