>SSM193 (SSM193Q) /CSM/SS/SSM1-D/SSM193Q.Seq.d/
XXXXXXXXXXTGGTGATGGTAATATTACATTTGATGAAGCTGTAAAACGTTTGAAGGAAA
CCGGTTCAAAAGATCCATTACGTGCTGCCTCTTCAATGTTTATTTCTCTTGATAAGGATA
AGGATGGAATTATTTCAATAAAAGAGATTCATGGCCATAAGGCTGATGTTGCTGCAAAGA
AATTGCAAAAGGCAATTAACAACATCTGTAACAACTTCTTGAAAGGCTATGACACTGATA
AGGATGGAAGGATCTCATGGGATGAAGTATGCAATTGGGTAAATAAAAACAATCCAGATG
CAATTGCTCCACTTATGATTGTTGAAAATTTCTTTAGTGAATTGGATAAAGATAATGACA
GATTCGTAACCAAGTGTGAACTTCAGGAGTACGTTACTAAATACAAAAGTCTCCCAGAAC
AATAAATAATTTATTGTTCAAATTCAATAATTATTAATCAACATTTATAATTTTCATTTT
TAAAAAAATTTAAATAAATAAATAAATAAAAAATAATCTTTTAAAAATAATTTTAAAGAT
TTAGTATGTTTTATTTAATATTTGATTTGAATAAAAAAAAAA

---GDGNITFDEAVKRLKETGSKDPLRAASSMFISLDKDKDGIISIKEIHGHKADVAAKK
LQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKNNPDAIAPLMIVENFFSELDKDNDR
FVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*fsflkkfk*ink*kiif*k*f*rf
smfylifdlnkkk

Frame A:
---GDGNITFDEAVKRLKETGSKDPLRAASSMFISLDKDKDGIISIKEIHGHKADVAAKK
LQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKNNPDAIAPLMIVENFFSELDKDNDR
FVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*fsflkkfk*ink*kiif*k*f*rf
smfylifdlnkkk


Frame B:
---vmvilhlmkl*nv*rkpvqkihyvlplqclfllirirmelfq*krfmairlmllqrn
ckrqlttsvtts*kamtlirmegshgmkyaig*iktiqmqllhl*llkislvnwikimtd
s*psvnfrstllntkvsqnnk*fivqiq*lliniynfhf*knlnk*inkk*sfknnfkdl
vcfi*yli*ikkk


Frame C:
---*w*yyi**scktfegnrfkrsitcclfnvyfs**g*gwnyfnkrdswp*g*ccckei
akgn*qhl*qllerl*h**gwkdlmg*smqlgk*kqsrcncstydc*kfl**ig*r**qi
rnqv*tsgvry*iqksprtinnllfkfnny*stfiififkki*ink*iknnllkiilki*
yvlfni*fe*kk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM673 (SSM673Q) /CSM/SS/SSM6-D/SSM673Q.Seq.d/                        932   0.0
SSM417 (SSM417Q) /CSM/SS/SSM4-A/SSM417Q.Seq.d/                        932   0.0
SSM408 (SSM408Q) /CSM/SS/SSM4-A/SSM408Q.Seq.d/                        932   0.0
SSM376 (SSM376Q) /CSM/SS/SSM3-D/SSM376Q.Seq.d/                        932   0.0
SSM294 (SSM294Q) /CSM/SS/SSM2-D/SSM294Q.Seq.d/                        932   0.0
SSM193 (SSM193Q) /CSM/SS/SSM1-D/SSM193Q.Seq.d/                        932   0.0
SSL192 (SSL192Q) /CSM/SS/SSL1-D/SSL192Q.Seq.d/                        932   0.0
SSL187 (SSL187Q) /CSM/SS/SSL1-D/SSL187Q.Seq.d/                        932   0.0
SSK881 (SSK881Q) /CSM/SS/SSK8-D/SSK881Q.Seq.d/                        932   0.0
SSK850 (SSK850Q) /CSM/SS/SSK8-C/SSK850Q.Seq.d/                        932   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116987|AC116987.2 Dictyostelium discoideum chromosome 2 map 3527441-3568052 strain AX4, complete sequence.   932  0.0  2
X82784|X82784.1 D.discoideum mRNA for calcium binding protein.   932  0.0  1
AC115592|AC115592.2 Dictyostelium discoideum chromosome 2 map 1-125959 strain AX4, complete sequence.    34  0.025  6
AL354807|AL354807.6 Human DNA sequence from clone RP11-522F22 on chromosome 13.    42  0.064  4
BQ875038|BQ875038.1 QGI6P19.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI6P19, mRNA sequence.    40  0.100  2
AC009110|AC009110.10 Homo sapiens chromosome 16 clone RP11-467O15, complete sequence.    38  0.12  6
AJ295694|AJ295694.3 Clostridium botulinum gerAA, gerAB and gerAC genes.    44  0.14  2
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence.    36  0.20  8
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4.    38  0.28  6
AC027274|AC027274.7 Homo sapiens chromosome 16 clone CTA-330E4, WORKING DRAFT SEQUENCE, 2 ordered pieces.    38  0.38  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    65   2e-09
(Q869S9) RecName: Full=Calcium-binding protein E; AltName: Full=...    61   2e-08
AB070447_1(AB070447|pid:none) Dictyostelium discoideum cbpE mRNA...    61   2e-08
AJ297597_1(AJ297597|pid:none) Dictyostelium discoideum mRNA for ...    58   2e-07
(Q54RF4) RecName: Full=Calcium-binding protein 4a;                     58   2e-07
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    57   4e-07
CR940353_624(CR940353|pid:none) Theileria annulata strain Ankara...    53   5e-06
EU181187_1(EU181187|pid:none) Triticum aestivum calcium-dependen...    51   3e-05
FB335001_1(FB335001|pid:none) Sequence 2527 from Patent WO200711...    51   3e-05
AJ920259_1(AJ920259|pid:none) Eimeria tenella mRNA for putative ...    49   1e-04

 psg: 0.75  gvh: 0.27  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSM193 is nuc

>SSM193Z.Seq
----------TGGTGATGGTAATATTACATTTGATGAAGCTGTAAAACGTTTGAAGGAAA
CCGGTTCAAAAGATCCATTACGTGCTGCCTCTTCAATGTTTATTTCTCTTGATAAGGATA
AGGATGGAATTATTTCAATAAAAGAGATTCATGGCCATAAGGCTGATGTTGCTGCAAAGA
AATTGCAAAAGGCAATTAACAACATCTGTAACAACTTCTTGAAAGGCTATGACACTGATA
AGGATGGAAGGATCTCATGGGATGAAGTATGCAATTGGGTAAATAAAAACAATCCAGATG
CAATTGCTCCACTTATGATTGTTGAAAATTTCTTTAGTGAATTGGATAAAGATAATGACA
GATTCGTAACCAAGTGTGAACTTCAGGAGTACGTTACTAAATACAAAAGTCTCCCAGAAC
AATAAATAATTTATTGTTCAAATTCAATAATTATTAATCAACATTTATAATTTTCATTTT
TAAAAAAATTTAAATAAATAAATAAATAAAAAATAATCTTTTAAAAATAATTTTAAAGAT
TTAGTATGTTTTATTTAATATTTGATTTGAATAAAAAAAAAA