AFL735
Library AF
(Link to library)
Clone ID AFL735
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig -
Original site URL
Representative seq. ID
(Link to Original site)
Representative DNA sequence
>AFL735 (AFL735Q) /CSM/AF/AFL7-B/AFL735Q.Seq.d/
XXXXXXXXXXACAAATGNTGNNCNNCAAATCGTTGTCCAACTTACAGTTATCAAAGNATT
TCNAAGACAAGATCAACAAAAGAAACAAAAAATTCANCAAGNGAACNATGCTGTCTACTT
GAGTGATGTTGAANAAGCTCNNCTTGAATTGGATGCTGGATTGGCTNAAANTNNTAAACA
AGAGAATCAAGAT
sequence update 2009. 4. 3
Translated Amino Acid sequence
---NXXXQIVVQLTVIKXFXRQDQQKKQKIXQXNXAVYLSDVEXAXLELDAGLAXXXKQE
NQD


Translated Amino Acid sequence (All Frames)
Frame A:
---qmxxxkslsnlqlskxfxdkinkrnkkfxkxtmlst*vmlxklxlnwmldwlkxxnk
rik


Frame B:
---kxxxxnrcptysyqxisktrstketknsxxexcclle*c*xssx*igcwigxxx*tr
esr


Frame C:
---NXXXQIVVQLTVIKXFXRQDQQKKQKIXQXNXAVYLSDVEXAXLELDAGLAXXXKQE
NQD


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AFL735 (AFL735Q) /CSM/AF/AFL7-B/AFL735Q.Seq.d/ 262 2e-69
AHM309 (AHM309Q) /CSM/AH/AHM3-A/AHM309Q.Seq.d/ 238 2e-62
CHL874 (CHL874Q) /CSM/CH/CHL8-D/CHL874Q.Seq.d/ 230 6e-60
VHG846 (VHG846Q) /CSM/VH/VHG8-B/VHG846Q.Seq.d/ 230 6e-60
SSE796 (SSE796Q) /CSM/SS/SSE7-D/SSE796Q.Seq.d/ 230 6e-60
SLI803 (SLI803Q) /CSM/SL/SLI8-A/SLI803Q.Seq.d/ 230 6e-60
SLI655 (SLI655Q) /CSM/SL/SLI6-C/SLI655Q.Seq.d/ 230 6e-60
SLH374 (SLH374Q) /CSM/SL/SLH3-D/SLH374Q.Seq.d/ 230 6e-60
SLH142 (SLH142Q) /CSM/SL/SLH1-B/SLH142Q.Seq.d/ 230 6e-60
SLG381 (SLG381Q) /CSM/SL/SLG3-D/SLG381Q.Seq.d/ 230 6e-60

own update 2009. 4. 3
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

(BJ346555) Dictyostelium discoideum cDNA clone:dda24f09, 3' ... 262 4e-66 1
(BJ354862) Dictyostelium discoideum cDNA clone:dda55b03, 3' ... 238 6e-59 1
(U25143) Dictyostelium discoideum cAMP-inducible prespore pr... 230 1e-56 1
(AU053508) Dictyostelium discoideum slug cDNA, clone SLI803. 230 1e-56 1
(AU053438) Dictyostelium discoideum slug cDNA, clone SLI655. 230 1e-56 1
(AU040058) Dictyostelium discoideum slug cDNA, clone SLA333. 230 1e-56 1
(AU039982) Dictyostelium discoideum slug cDNA, clone SLH374. 230 1e-56 1
(AU039772) Dictyostelium discoideum slug cDNA, clone SLG381. 230 1e-56 1
(AU039205) Dictyostelium discoideum slug cDNA, clone SLH142. 230 1e-56 1
(AU034359) Dictyostelium discoideum slug cDNA, clone SLC743. 230 1e-56 1
dna update 2009. 4. 7
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags... 40 0.024

protein update 2009. 4. 4
PSORT

psg: 0.00 gvh: 0.00 alm: 0.00 top: 0.00 tms: 0.00 mit: 0.00 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

100.0 %:

>> prediction for AFL735 is

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID AFL735Z
3' end seq.
>AFL735Z.Seq
XXXXXXXXXXACAAATGNTGNNCNNCAAATCGTTGTCCAACTTACAGTTATCAAAGNATT
TCNAAGACAAGATCAACAAAAGAAACAAAAAATTCANCAAGNGAACNATGCTGTCTACTT
GAGTGATGTTGAANAAGCTCNNCTTGAATTGGATGCTGGATTGGCTNAAANTNNTAAACA
AGAGAATCAAGAT
Length of 3' end seq. 193
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -