>SSK269 (SSK269Q) /CSM/SS/SSK2-C/SSK269Q.Seq.d/
GGAGAAAGAAAATAAAAAAAAAAAAAAAAAAATAAAAAAGATGAATAACCAATTAGTTCC
ACAAAATGCAGCAGCCGCAGCCGCAGCCGCAGCCGCAGCAGCAGCAGCAGCAGCAGCAAA
TAGTTTAAAATCAAGAAAACCATATACAATCTCAAAACAAAGAGAAAATTGGACAGATGA
AGAACATCAAAAGTTTTTAGAAGCTTTGACATTATTTGACAGAGATTGGAAAAAGATTGA
ATCTTTTGTTGGTAGTAAAACAGTTATACAGATTAGAAGTCATGCACAAAAATATTTTAT
AAAAGTTCAAAAAAACAATACAGGTGAAAGAATACCACCACCAAGACCAAAAAGAAAATC
AATTCAACCATATCCACAAAAACAAAAACATGATGGAATGGGAGCATTTATACCAGATTC
ATTATCGGGTAATCACTTTATAAGTAGTTCATCATTTGCAACATGGATGACCTATAGAGG
ATTAATGCCAAATATATCGGAATCACAAATTAATCCAAGTGATCTTCAAAAACAATTGGA
ACAATTACAACAGGCCCAACAATATATTCAACAAGCCGTTACAACTGCACAGAGTTCACA
AAGAAATGGTGGGTTACCACCAAATCCTTCAAGTAATAATGGTGGTACXXXXXXXXXXTA
ATAATAATAATAATAATAATAATAATAATGGTGGTGATTTTGGTGATCAAAACCATTCAA
ATATGGTTAATTTAGGAAACTATTATAATAATCATCCAAATCAAAATACTATTAATGCTT
TATATTCTTTAAATCAACCTTCAACACTTTCAAATAATCCTTTAAATATGGTGGGAAATT
TAAATCCTCAAAAACAACCACCTTTTAATTTAAATCTAAATATGCAATCTCGTTCTTAAA
AAAAAAAAAAAAAACAGAACCA

EKENKKKKKKIKKMNNQLVPQNAAAAAAAAAAAAAAAAANSLKSRKPYTISKQRENWTDE
EHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGERIPPPRPKRKS
IQPYPQKQKHDGMGAFIPDSLSGNHFISSSSFATWMTYRGLMPNISESQINPSDLQKQLE
QLQQAQQYIQQAVTTAQSSQRNGGLPPNPSSNNGG---

---NNNNNNNNNNGGDFGDQNHSNMVNLGNYYNNHPNQNTINALYSLNQPSTLSNNPLNM
VGNLNPQKQPPFNLNLNMQSRS*kkkkkqn

Frame A:
gerk*kkkkknkkde*pisstkcssrsrsrsrsssssssk*fkikktiynlktkrkldr*
rtskvfrsfdii*qrlekd*ifcw**nsytd*ksctkifyksskkqyr*kntttktkkki
nstistktkt*wngsiytrfiig*slyk*fiicnmddl*rinakyigitn*sk*ssktig
tittgptiystsryncteftkkwwvttksfk**wwy---

---**********ww*fw*skpfkyg*frkll**sskskyy*cfiffkstfntfk*sfky
ggkfkssktttf*fkskyaisflkkkkktep

Frame B:
EKENKKKKKKIKKMNNQLVPQNAAAAAAAAAAAAAAAAANSLKSRKPYTISKQRENWTDE
EHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGERIPPPRPKRKS
IQPYPQKQKHDGMGAFIPDSLSGNHFISSSSFATWMTYRGLMPNISESQINPSDLQKQLE
QLQQAQQYIQQAVTTAQSSQRNGGLPPNPSSNNGG---

---NNNNNNNNNNGGDFGDQNHSNMVNLGNYYNNHPNQNTINALYSLNQPSTLSNNPLNM
VGNLNPQKQPPFNLNLNMQSRS*kkkkkqn

Frame C:
rkkikkkkkk*kr*itn*fhkmqqpqpqpqpqqqqqqqqiv*nqenhiqsqnkekigqmk
niksf*kl*hylteigkrlnlllvvkqlyrlevmhknil*kfkktiqvkeyhhqdqkenq
fnhihknknmmewehlyqihyrvitl*vvhhlqhg*pied*cqiyrnhkliqvifknnwn
nynrpnnifnkplqlhrvhkemvgyhqilqvimvv---

---iiiiiiiiimvvilviktiqiwli*etiiiiiqikillmlyil*inlqhfqiil*iw
wei*ilknnhlli*i*icnlvlkkkkknrt

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSK269 (SSK269Q) /CSM/SS/SSK2-C/SSK269Q.Seq.d/                       1009   0.0
VSJ355 (VSJ355Q) /CSM/VS/VSJ3-C/VSJ355Q.Seq.d/                         40   0.059
CHL519 (CHL519Q) /CSM/CH/CHL5-A/CHL519Q.Seq.d/                         40   0.059
AHG174 (AHG174Q) /CSM/AH/AHG1-D/AHG174Q.Seq.d/                         40   0.059
SSM738 (SSM738Q) /CSM/SS/SSM7-B/SSM738Q.Seq.d/                         38   0.23
SSM595 (SSM595Q) /CSM/SS/SSM5-D/SSM595Q.Seq.d/                         38   0.23
SSM255 (SSM255Q) /CSM/SS/SSM2-C/SSM255Q.Seq.d/                         38   0.23
SSK411 (SSK411Q) /CSM/SS/SSK4-A/SSK411Q.Seq.d/                         38   0.23
SSK393 (SSK393Q) /CSM/SS/SSK3-D/SSK393Q.Seq.d/                         38   0.23
SSK184 (SSK184Q) /CSM/SS/SSK1-D/SSK184Q.Seq.d/                         38   0.23

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BI272254|BI272254.1 NF016A03FL1F1020 Developing flower Medicago truncatula cDNA clone NF016A03FL 5', mRNA sequence.    78   1e-12  3
BF005534|BF005534.1 EST434032 DSLC Medicago truncatula cDNA clone pDSLC-37D4, mRNA sequence.    78   2e-12  3
BG452146|BG452146.1 NF077A07LF1F1053 Developing leaf Medicago truncatula cDNA clone NF077A07LF 5', mRNA sequence.    78   4e-12  3
CF445035|CF445035.1 EST681380 normalized cDNA library of onion Allium cepa cDNA clone ACAHF53, mRNA sequence.    64   2e-11  2
BG586744|BG586744.1 EST488512 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-44L17 5' end, mRNA sequence.    44   4e-11  3
BE319984|BE319984.2 NF024A12RT1F1085 Developing root Medicago truncatula cDNA clone NF024A12RT 5', mRNA sequence.    44   4e-11  3
BQ041869|BQ041869.1 gd27h01.y1 Moss EST library PPS Physcomitrella patens cDNA clone PEP_SOURCE_ID:PPS71602 5' similar to TR:Q9SF43 Q9SF43 PUTATIVE MYB-RELATED PROTEIN. ;, mRNA sequence.    80   6e-11  1
CF442987|CF442987.1 EST679332 normalized cDNA library of onion Allium cepa cDNA clone ACAHI93, mRNA sequence.    62   3e-10  2
CF444516|CF444516.1 EST680861 normalized cDNA library of onion Allium cepa cDNA clone ACAGV35, mRNA sequence.    62   3e-10  2
AW832423|AW832423.1 sm10b05.y1 Gm-c1027 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1027-8458 5' similar to TR:O04605 O04605 SIMILARITY TO MYB-RELATED PROTEINS. ;, mRNA sequence.    76   1e-09  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54IF9) RecName: Full=Myb-like protein G;                            265   2e-69
AP005823_19(AP005823|pid:none) Oryza sativa Japonica Group genom...   133   1e-29
EU963464_1(EU963464|pid:none) Zea mays clone 262971 unknown mRNA.     132   2e-29
AM455206_1(AM455206|pid:none) Vitis vinifera contig VV78X069637....   131   3e-29
AB025606_16(AB025606|pid:none) Arabidopsis thaliana genomic DNA,...   130   5e-29
AY550303_1(AY550303|pid:none) Arabidopsis thaliana MYB transcrip...   130   5e-29
CP001330_126(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   130   8e-29
AC016661_17(AC016661|pid:none) Arabidopsis thaliana chromosome 3...   129   1e-28
DQ822984_1(DQ822984|pid:none) Glycine max MYB transcription fact...   129   1e-28
EU116031_1(EU116031|pid:none) Chimonanthus praecox transcription...   129   1e-28

 psg: 0.53  gvh: 0.58  alm: 0.32  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.37  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.50  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 36.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall

>> prediction for SSK269 is nuc

>SSK269F.Seq
GGAGAAAGAAAATAAAAAAAAAAAAAAAAAAATAAAAAAGATGAATAACCAATTAGTTCC
ACAAAATGCAGCAGCCGCAGCCGCAGCCGCAGCCGCAGCAGCAGCAGCAGCAGCAGCAAA
TAGTTTAAAATCAAGAAAACCATATACAATCTCAAAACAAAGAGAAAATTGGACAGATGA
AGAACATCAAAAGTTTTTAGAAGCTTTGACATTATTTGACAGAGATTGGAAAAAGATTGA
ATCTTTTGTTGGTAGTAAAACAGTTATACAGATTAGAAGTCATGCACAAAAATATTTTAT
AAAAGTTCAAAAAAACAATACAGGTGAAAGAATACCACCACCAAGACCAAAAAGAAAATC
AATTCAACCATATCCACAAAAACAAAAACATGATGGAATGGGAGCATTTATACCAGATTC
ATTATCGGGTAATCACTTTATAAGTAGTTCATCATTTGCAACATGGATGACCTATAGAGG
ATTAATGCCAAATATATCGGAATCACAAATTAATCCAAGTGATCTTCAAAAACAATTGGA
ACAATTACAACAGGCCCAACAATATATTCAACAAGCCGTTACAACTGCACAGAGTTCACA
AAGAAATGGTGGGTTACCACCAAATCCTTCAAGTAATAATGGTGGTAC----------

>SSK269Z.Seq
----------TAATAATAATAATAATAATAATAATAATAATGGTGGTGATTTTGGTGATC
AAAACCATTCAAATATGGTTAATTTAGGAAACTATTATAATAATCATCCAAATCAAAATA
CTATTAATGCTTTATATTCTTTAAATCAACCTTCAACACTTTCAAATAATCCTTTAAATA
TGGTGGGAAATTTAAATCCTCAAAAACAACCACCTTTTAATTTAAATCTAAATATGCAAT
CTCGTTCTTAAAAAAAAAAAAAAAAACAGAACCA

>SSK269P.Seq
GGAGAAAGAAAATAAAAAAAAAAAAAAAAAAATAAAAAAGATGAATAACCAATTAGTTCC
ACAAAATGCAGCAGCCGCAGCCGCAGCCGCAGCCGCAGCAGCAGCAGCAGCAGCAGCAAA
TAGTTTAAAATCAAGAAAACCATATACAATCTCAAAACAAAGAGAAAATTGGACAGATGA
AGAACATCAAAAGTTTTTAGAAGCTTTGACATTATTTGACAGAGATTGGAAAAAGATTGA
ATCTTTTGTTGGTAGTAAAACAGTTATACAGATTAGAAGTCATGCACAAAAATATTTTAT
AAAAGTTCAAAAAAACAATACAGGTGAAAGAATACCACCACCAAGACCAAAAAGAAAATC
AATTCAACCATATCCACAAAAACAAAAACATGATGGAATGGGAGCATTTATACCAGATTC
ATTATCGGGTAATCACTTTATAAGTAGTTCATCATTTGCAACATGGATGACCTATAGAGG
ATTAATGCCAAATATATCGGAATCACAAATTAATCCAAGTGATCTTCAAAAACAATTGGA
ACAATTACAACAGGCCCAACAATATATTCAACAAGCCGTTACAACTGCACAGAGTTCACA
AAGAAATGGTGGGTTACCACCAAATCCTTCAAGTAATAATGGTGGTAC----------TA
ATAATAATAATAATAATAATAATAATAATGGTGGTGATTTTGGTGATCAAAACCATTCAA
ATATGGTTAATTTAGGAAACTATTATAATAATCATCCAAATCAAAATACTATTAATGCTT
TATATTCTTTAAATCAACCTTCAACACTTTCAAATAATCCTTTAAATATGGTGGGAAATT
TAAATCCTCAAAAACAACCACCTTTTAATTTAAATCTAAATATGCAATCTCGTTCTTAAA
AAAAAAAAAAAAAACAGAACCA