>SSK207 (SSK207Q) /CSM/SS/SSK2-A/SSK207Q.Seq.d/
ACTAAAGCAAATTGTGGTTTATTCCATTGTAATTACAATGAATATTGTATTATGGTTAAT
GGTTATCTTCAATGTTTATTCTCAAATGGTACTGCACCATTTGCATGTGGTCTCCAAACT
TGTGTTCCACCACAATTATGTGTAAAGGTTGAAAATTGTCAACAATGTGTTTCTCCACCA
AGACCAGACAATAACTGTGGTGACAAATATTGTGATGATGAACATCAATGTGTTAGAAAA
GGACTCGGTTATGAATGTATTCCAAAACGTCTTACTTGTGAGACCAAAAAATGCGAACCT
CTCAAGTTTGTATCATGGTAAATGGTGATGCTCAATGTATCGTACCACCAGCTGCCGCCG
CTGCTGAAATTAGAATAAACAATTTCAGATTCAACCGTAACTCTGTTCAACGTAATGCCA
AACCAGCTCAACAACAAAGATCTGCTCAACATGCCAAACCAGCTCAACATGGTAAACCAG
CTCAACATGCCACTCAACAACAACATGCCAAACCAGCCCAAAATGCTAAACCAGTTCAAC
ATAACGCCCAACAACAACATGCCAAACCAGCTCAACATGCCGCTCAACAACAACATGCCA
AACCAGCTCAACATGTCGCTCAACAACAACAXXXXXXXXXX

*sklwfipl*lq*ilyyg*wlssmfilkwycticmwspnlcsttimckg*klstmcfstk
trq*lw*qil***tsmc*krtrl*mysktsyl*DQKMRTSQVCIMVNGDAQCIVPPAAAA
AEIRINNFRFNRNSVQRNAKPAQQQRSAQHAKPAQHGKPAQHATQQQHAKPAQNAKPVQH
NAQQQHAKPAQHAAQQQHAKPAQHVAQQQ---

Frame A:
tkancglfhcnyneycimvngylqclfsngtapfacglqtcvppqlcvkvencqqcvspp
rpdnncgdkycddehqcvrkglgyecipkrltcetkkceplkfvsw*mvmlnvsyhqlpp
llkle*tisdstvtlfnvmpnqlnnkdllnmpnqlnmvnqlnmplnnnmpnqpkmlnqfn
itpnnnmpnqlnmplnnnmpnqlnmslnnn---


Frame B:
lkqivvysivitmnivlwlmvifnvysqmvlhhlhvvsklvfhhnyv*rlkivnnvflhq
dqtitvvtnivmmninvlekdsvmnvfqnvllvrpknanlsslyhgkw*csmyrttscrr
c*n*nkqfqiqp*lcst*cqtssttkicstcqtsstw*tsstchstttcqtspkc*tsst
*rptttcqtsstcrstttcqtsstcrstt---


Frame C:
*sklwfipl*lq*ilyyg*wlssmfilkwycticmwspnlcsttimckg*klstmcfstk
trq*lw*qil***tsmc*krtrl*mysktsyl*DQKMRTSQVCIMVNGDAQCIVPPAAAA
AEIRINNFRFNRNSVQRNAKPAQQQRSAQHAKPAQHGKPAQHATQQQHAKPAQNAKPVQH
NAQQQHAKPAQHAAQQQHAKPAQHVAQQQ---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSK207 (SSK207Q) /CSM/SS/SSK2-A/SSK207Q.Seq.d/                       1078   0.0
SFJ585 (SFJ585Q) /CSM/SF/SFJ5-D/SFJ585Q.Seq.d/                       1061   0.0
CFJ668 (CFJ668Q) /CSM/CF/CFJ6-C/CFJ668Q.Seq.d/                       1061   0.0
SFB772 (SFB772Q) /CSM/SF/SFB7-C/SFB772Q.Seq.d/                       1055   0.0
CFJ111 (CFJ111Q) /CSM/CF/CFJ1-A/CFJ111Q.Seq.d/                       1053   0.0
CFA402 (CFA402Q) /CSM/CF/CFA4-A/CFA402Q.Seq.d/                       1053   0.0
AFO895 (AFO895Q) /CSM/AF/AFO8-D/AFO895Q.Seq.d/                       1053   0.0
CHA459 (CHA459Q) /CSM/CH/CHA4-C/CHA459Q.Seq.d/                       1035   0.0
CHB462 (CHB462Q) /CSM/CH/CHB4-C/CHB462Q.Seq.d/                        979   0.0
CFH347 (CFH347Q) /CSM/CF/CFH3-B/CFH347Q.Seq.d/                        944   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X57149|X57149.1 D.discoideum EB4 gene for prespore vesicle protein.   579   0.0    5
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.   579   0.0    7
M11028|M11028.1 Slime mold (D.discoideum) prespore EB4 gene.      283   0.0    5
AC096910|AC096910.6 Rattus norvegicus clone CH230-77N18, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces.    48   0.082  2
AC098992|AC098992.6 Rattus norvegicus clone CH230-199M20, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    48   0.15   1
BD079026|BD079026.1 Mammalian gene participating in viral infection and tumor suppression.    48   0.15   1
AP004173|AP004173.1 Mycoplasma penetrans genomic DNA, complete sequence, section 4/5.    46   0.61   1
AC018408|AC018408.2 Homo sapiens clone RP11-17E15, LOW-PASS SEQUENCE SAMPLING.    42   1.7    4
AC020753|AC020753.2 Homo sapiens chromosome 3p clone RP11-322F9, WORKING DRAFT SEQUENCE, 14 unordered pieces.    40   2.9    2
AC024216|AC024216.16 Homo sapiens chromosome 3 clone RP11-204C23, WORKING DRAFT SEQUENCE, 35 unordered pieces.    40   3.3    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S28358(S28358;S20090) prespore vesicle protein - slime mold (Dic...   229   4e-89
(P08798) RecName: Full=Prespore vesicle protein;          Short=...   229   4e-89
B29960(B29960) Balbiani ring 2 chain (BR2.1) - midge (Chironomus...    46   0.001
AY003872_15(AY003872|pid:none) Plasmodium vivax YAC 1H14, comple...    44   0.004
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg...    42   0.011
CR382126_497(CR382126|pid:none) Kluyveromyces lactis strain NRRL...    42   0.015
(P37218) RecName: Full=Histone H1;  &S45662(S45662) &U03391_1(U0...    42   0.020
CR522870_3008(CR522870|pid:none) Desulfotalea psychrophila LSv54...    41   0.026
AY548171_24(AY548171|pid:none) Human herpesvirus 3 strain BC, co...    40   0.044
DQ438980_1(DQ438980|pid:none) Trypanosoma cruzi antigenic lectin...    40   0.074

 psg: 0.87  gvh: 0.47  alm: 0.42  top: 0.27  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 24.0 %: nuclear
	 20.0 %: extracellular, including cell wall
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for SSK207 is cyt

>SSK207F.Seq
ACTAAAGCAAATTGTGGTTTATTCCATTGTAATTACAATGAATATTGTATTATGGTTAAT
GGTTATCTTCAATGTTTATTCTCAAATGGTACTGCACCATTTGCATGTGGTCTCCAAACT
TGTGTTCCACCACAATTATGTGTAAAGGTTGAAAATTGTCAACAATGTGTTTCTCCACCA
AGACCAGACAATAACTGTGGTGACAAATATTGTGATGATGAACATCAATGTGTTAGAAAA
GGACTCGGTTATGAATGTATTCCAAAACGTCTTACTTGTGAGACCAAAAAATGCGAACCT
CTCAAGTTTGTATCATGGTAAATGGTGATGCTCAATGTATCGTACCACCAGCTGCCGCCG
CTGCTGAAATTAGAATAAACAATTTCAGATTCAACCGTAACTCTGTTCAACGTAATGCCA
AACCAGCTCAACAACAAAGATCTGCTCAACATGCCAAACCAGCTCAACATGGTAAACCAG
CTCAACATGCCACTCAACAACAACATGCCAAACCAGCCCAAAATGCTAAACCAGTTCAAC
ATAACGCCCAACAACAACATGCCAAACCAGCTCAACATGCCGCTCAACAACAACATGCCA
AACCAGCTCAACATGTCGCTCAACAACAACA----------